Array 1 295184-297672 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHRD01000003.1 Pseudomonas stutzeri strain PS_151 NODE_3_length_320857_cov_19.9732, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 295184 32 100.0 33 ................................ CCCTTCAGCGCGTCATAAGCTTTCTCACACGCC 295249 32 100.0 34 ................................ CGATATTCAGAGCGATTTTATTACGACCCAGCAA 295315 32 100.0 34 ................................ CTCTGGACTGACCCGAAGCCGCTGCCAGGCGAGC 295381 32 100.0 34 ................................ ATGCCATAACCGAATAGGCGAGCGCGTAGGCCTC 295447 32 100.0 33 ................................ TGACGTCAGCCGCAGGTGCGCGCAGCAACCCGC 295512 32 100.0 34 ................................ TTTCTGGAGCGAGATCGCCGTTAAATGCGTCCAG 295578 32 100.0 35 ................................ TTTGTCCTTGAAGTTGACCATGTTGGTCTTCATGC 295645 32 100.0 34 ................................ AATAGTAGCCTTGTTGTTGACGGCATCCTCCGTC 295711 32 100.0 34 ................................ AAGGCAAGCCGCCAGATCCTGGACGACTCGTCTG 295777 32 100.0 34 ................................ TTCTAGAGACTGTCGTAACCTACGAACTGGATGC 295843 32 100.0 35 ................................ ACCTAACTCATGAAGCGCCGTATCGCGATGAAATG 295910 32 100.0 34 ................................ ACCGAACTGGTGGCGGAGACGAAGTGTGAGACGG 295976 32 100.0 34 ................................ TTAGTCTCTTCCTCAACCAGCCCCATTCCACCGA 296042 32 100.0 37 ................................ TCCCATACGCCATGCGGCAACACCCCGCGCTGGCGCT 296111 32 100.0 34 ................................ TGGCCGTCTCGCACAGCCTTTGCCAGCGCCTCGA 296177 32 100.0 33 ................................ ATTTCGCCGGGGTCGCCCTTGAACTCGCTAGAC 296242 32 100.0 34 ................................ AGGTCAGCCGCTTCGGTAATCCTGAACTCCGCCC 296308 32 100.0 34 ................................ TTTGATGGTGTTCAGGGTTTTGCCGTTGCCTTGC 296374 32 100.0 33 ................................ AGCGCGTACAGGCCGCAGACGGCCGCCCCGATC 296439 32 100.0 35 ................................ ATCGACAACGGCACCATCCGCAGCACCGCGGCGCC 296506 32 100.0 35 ................................ TGGATCGTCGACGCCGACGCGGTGCCGGCCGATCG 296573 32 100.0 35 ................................ TGGGCAGTGGACAAGCCCATGCACCCGTCCCTGGT 296640 32 100.0 37 ................................ ATCGCGGCGAGCATCGACCAGGACAGCCGGATCCGCT 296709 32 100.0 35 ................................ CAGTAGGCCCTACCGTCCTTGATCCCTGCCACATA 296776 32 100.0 35 ................................ GAGGCGTGGTGGGACAGGCAGCCTCACCGCGAGCA 296843 32 100.0 35 ................................ CTGTGCCTCTGCATCTGCTTTCTCCGTTGCGGCCT 296910 32 100.0 36 ................................ TAACCCTCCTGGTCGTACTCTCAATCGGCCATGCCC 296978 32 100.0 37 ................................ ATGGGATCACCGCTCGAAGGATGTGAGGCCCGACCAT 297047 32 100.0 34 ................................ CTCGAGTCGGGCACGCTGCTGGCGGTCTACTCGG 297113 32 100.0 35 ................................ AACGATAACCTGACTCGCATTGGTGAGGCCTCTAG 297180 32 100.0 33 ................................ AGGATCGTATTCGCCAGGGCTCGCATGGCCTCC 297245 32 100.0 34 ................................ GTTCCGAGCAGAACGACATTGCCCGCGAAGCCAA 297311 32 100.0 35 ................................ TAACCGCCCAGGGGTTGAAGCGCGCCGACGCGGAG 297378 32 96.9 34 .................A.............. CCCGCACCTCGCCCTTTTCCAGGGTGGCGCGCAC 297444 32 100.0 34 ................................ TTCGAGAGTGGGCACCGTCGCGCCTCCTATGTGA 297510 32 100.0 34 ................................ GGGGTCCACGCGACGGTACGGCCGTTGGGATACA 297576 32 96.9 33 .................A.............. CTTGTGGCTCTGTTGTTGGCGATCAGGGGGAGC 297641 32 93.8 0 .........................A.A.... | ========== ====== ====== ====== ================================ ===================================== ================== 38 32 99.7 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : ACCGTTCTTATGGAAATAGTTGAAGCCGATGATGATCCTGGTCAGCTATGACGTGAGCACGCAGGAAACCGGTGGTGACAAGCGCCTACGTCGCCTTTCCAAAGCCTGCCGTGATTTCGGGCAGCGCGTGCAGTACTCGGTTTTTGAAATAGAGGTCGACGCCGCTCAGTGGACCGTCCTTAAACAGCGCCTGTGCGATTTGATCGACCCCGAACAAGACAGCCTGCGTTTTTACTACCTCGGCAGTAATTGGCAGGCTCGCGTCGAACATGTCGGTGCCAAGCCAGTGCTCGATTTGAATGGACCGCTGATTTTTTGACCCAATTGCGAACCCAAAGCGACCGATGAAACCCGAGAGGTTCGCATGCTACTAACCTATTGAAATCTTTATTTATTTTATTTCCCGGCCGCCGCCTGGACCCACAGATGTGCCTCGTCGACGCCGCTTCGCAAAATGCCCAGTTTTTCTTCACCTAGCACAACGGGTTATAAACCCGTGG # Right flank : CACCTTAATGGCATTCCTGGCGCAAACCGGCCAGCATCGAGCTCCACGAAGACACCCACAACACCGCGGAGGGCGCCGGCGCCGCCGCACTGGCTGCCGCCATTCAGGAACGCGCGCTTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGAAGACACCCACAACACCGCGGAGGGCGCCGGCGCCGCCGCACTGGCTGCCGCCATTCAGGAACGCGCGCTTAACGCGGGGGAACGCATTGCCGTCGTGCTCAGCGGCGCCAACATCGATCGCCGTGTGCTGACGGAGATACTGGCTGACCACGTGCGGTATTCCGACTGACGTGTGCGATGCCAGCAAGGCAGAAGGCTGCCTGTTAAATCAGGAAACGAGTCCGTCGCCGCAGGCAATTCCCGTCTGGCCCGCGCAACGCCATACTCGCGCCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //