Array 1 439247-440594 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043869.1 Neptunomonas concharum strain JCM17730 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 439247 28 100.0 32 ............................ ACTGACACCTATAACAATGCCGTCCCCATATG 439307 28 100.0 32 ............................ GTATGGCTGTCATATAAAACCGAGGAGATTAA 439367 28 100.0 32 ............................ GGTACAAGCACGACAACTGGGGGCGGTGGCTC 439427 28 100.0 32 ............................ GCCAGAGCAGGCCGGAAACCGGATAACAAAAA 439487 28 100.0 32 ............................ ACCAATCAGAATGACCACTGATGCCACCGGGG 439547 28 100.0 32 ............................ AATATCAGCAACTACATCCACATCCTGAAATA 439607 28 100.0 32 ............................ GGGCTAATCGGCACGGGTGTAGATCGAGCTAT 439667 28 100.0 32 ............................ TTACATTGTTTTGACATCCAGAAATGTTCACA 439727 28 100.0 32 ............................ ATGCAGATGGCTACGTTCTTCGGGCCTGATGA 439787 28 100.0 32 ............................ GATCCCTCAATCAGTGCCTGCGACTTTTTATA 439847 28 100.0 32 ............................ TGAATAGTGTACAGCACATCAACATCAGACGG 439907 28 100.0 32 ............................ TGACTGGCTAGTTGGCTTGCAACGCCAGCCAA 439967 28 100.0 32 ............................ ACTTTATCAGCATCAAGCTTTGTTTTCTCAAT 440027 28 100.0 32 ............................ GAACAAATTCGCGACTATTGCGGCATTGAAAG 440087 28 100.0 32 ............................ GAATAGTAATGAGTCGCCCTAGCGATTGGACA 440147 28 100.0 32 ............................ ATATTCTGATTCTTCCCGTTTCTGTCAAATCT 440207 28 100.0 32 ............................ GATGGAGAGTTTTCAAACTCAATCGTCACAGG 440267 28 100.0 32 ............................ TACACGACGCGCAGGGCAATGTCGTAGGATCT 440327 28 100.0 32 ............................ CACATGACCGTTAGGTACCGCAATAGCGATAC 440387 28 100.0 32 ............................ ATCTCAAAAACATCATTGTTAACAATGCCGCT 440447 28 100.0 32 ............................ TCTTGTCCGTGATCTTGACGCTTTCTAGCCCG 440507 28 100.0 32 ............................ ATCATCCGGGCTGATATGTCGGCGTAGAGTTC 440567 28 96.4 0 ..........................T. | ========== ====== ====== ====== ============================ ================================ ================== 23 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATGTGTCTTACGTAAGCTTTTTCCGTAAACAGGTGAAATCGCCCGAGCGGGTCGAGCGTGATATGCAGAACAAAGCCGTCTTGTGGGCTGAGAAGTCGGGCAAACCACTAGATGAATGCTTAATTGAGCTTGAAAAAAGCAAGCCAGAAACTCTATGTCGTTTGCCATTTGTCTACTTACACAGCCAGCAAACTAAGCAGCGCTCGCCAGATAAAAGTAGCAAGTTCCCACTGTTTATTGAAATGCAGCCTCAAAGTGAAGAGCACGCTGGGCAGTTCGACTGCTACGGTTTGAGTACCAAAACAAATGGCAGGCAAGTAGTCGCCACAGTACCGTACTTTTAAAGGTATTGAGAAAAAGGGTAAGTTTTACCCTTTGTTTATGCTCTTTAAAAATATGTATTAAATTCATAAAGTTACAATGGGTGGTTTTTAACAAGGTAAAAATTCGTTTTTATCCTAACTGCCTGTTGTAACTTATTTTTATATTGCTAATCTATT # Right flank : AGAAAGTTCGTTAGGACGATTTCAATCCTATAAGTCGATGACATTATATCTCGCCTCATCTTAGTGCGTTTAAATGTCCTTTATCGGTGCAACGCCTTTTATAAAGTTTCTTTGAGCACCGCAATAGTGCCGTTTAATCCCCTATTTATGTTCTGGTATGTAACTTGCTTTTACTCCTTATCTTAAACGGTTGATGGGGAGGCGTTGGTTGCGATGGAGCTCACACCGCGAGAAAAAGATAAGTTGTTGCTGTTTACTGCAGCGTTGTTGGCGGAACGGCGGATGGCGCGTGGTTTAAAGTTGAACTACCCCGAGTCGGTTGCGTTGATTAGTGCGGCGATTTTGGAAGGGGCGCGTGATGGCAGAACGGTCTCAGAGTTGATGGATTATGGCCGTACCTTGTTGAGTGCAGATGATGTGATGCCCGGTGTAGCGGAGATGATCCATGATGTGCAAGTTGAGGCGACCTTTCCGGATGGCACTAAACTGGTCACCGTTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //