Array 1 1-542 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAFM01000007.1 Legionella pneumophila 130b, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 1 36 97.3 35 -.................................... TGCCTAAACCTGATTTCTTCCATAGAGTAAACGTC 72 37 100.0 34 ..................................... TGCAACGGGTCGAAGTAATCCATTAAGTCAAACA 143 37 100.0 35 ..................................... TAAAGGCGCAGTACCTTTTTTTAAGTCTGTGAATA 215 37 100.0 35 ..................................... TGTAATCTTCAACGTTAAAGATGAATTGTTGTGCT 287 37 100.0 34 ..................................... CAAGAACTATTAATGGATTGGTTGGATTGGTGTT 358 37 100.0 36 ..................................... AAATCATTGTGATTGGTAATAAAGAAAGCGGTTTAC 431 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 506 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 98.0 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : | # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 11380-14998 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAFM01000006.1 Legionella pneumophila 130b, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11380 37 100.0 35 ..................................... GAGACAATAGCGCAATATATAGAAGAAGAATAATT 11452 37 100.0 36 ..................................... TTCAGCAAAATCAGGTAATACACGCTTTGACATAAC 11525 37 100.0 35 ..................................... CAAGAAATAAAAAATATTTTCTTTTAAGTGAACGG 11597 37 100.0 34 ..................................... AGAAGTCTAACACTGTATCATTTTCATTACTATG 11668 37 100.0 36 ..................................... CAACAGCAACAACTGGGTAAGGTTGACCACAGATAA 11741 37 100.0 36 ..................................... TGGAATTATAAAGGCGATATGTGCTATAGAACAATT 11814 37 100.0 36 ..................................... GGAGCTGGTTAGAATGATTACACACACTATACAACC 11887 37 100.0 33 ..................................... TTCTCTTAATGTTTCTTACGTCTTTCTTAAATT 11957 37 100.0 35 ..................................... TACAGTGTTAGCTAGCACTAATCCTTTTGTTCCCA 12029 37 100.0 36 ..................................... TCATATAAAGGCTGCCAATCAACAACCCAATCATTA 12102 37 100.0 35 ..................................... GCATTTGGCGTTTATGTAATGCAAGCTTACTCTCC 12174 37 100.0 33 ..................................... AATGCAGGAAATGGAATTTAACCTAACTTTTTA 12244 37 100.0 34 ..................................... CTTTTTGAAGTTCCTGAGATGTGGTGACTTCGGC 12315 37 100.0 33 ..................................... TCAAATGCTGCTGGTACTGCTGGTATATGTGGA 12385 37 100.0 35 ..................................... CAGTTGGTTACTCGAAAATGCGAGACGCTTTGAAT 12457 37 100.0 35 ..................................... AGCTAGTGGCGGAGACAAATATGAAAATTGATTCA 12529 37 100.0 34 ..................................... TCAGCTAACGGCTGCGCATATTTTAAATTATTAG 12600 37 100.0 32 ..................................... CTTGTGCCGGCTTGAACACATCTATATCTATA 12669 37 100.0 35 ..................................... ATAAACAGCCATCCCGATGTTATAAAGGGGATGGC 12741 37 100.0 36 ..................................... AAAATGATAAGGCGAGCGTTTCAGTTCGCATAATGC 12814 37 100.0 35 ..................................... AGCTTTGCTTAGTGTTTTAGGTGCGGAATATGAGG 12886 37 100.0 35 ..................................... ATAACTACCACGTCAATTGCATTTAATCCTTTCGG 12958 37 100.0 34 ..................................... ATTAAAAGTTATAAATATTATATATTAGTTTAAA 13029 37 100.0 34 ..................................... TCATAGTTATCATCAATGCATGACCAGTCTAGGT 13100 37 100.0 35 ..................................... TATTAAATGAATTTGCGCTCCCTGACTGAAAAACA 13172 37 100.0 33 ..................................... ACCTATAAGAGCTGCAATCCATATTGATTTTAT 13242 37 100.0 34 ..................................... AATACGGGTGCTGCTAAAGCACTGTTTCGCTATT 13313 37 100.0 35 ..................................... TCAATGTTTGCCACCAATAACAATAAAAATAGGTG 13385 37 100.0 33 ..................................... TAAAATCATAGGTTGCAGGGAGCGCATCTTGGT 13455 37 100.0 36 ..................................... TGTTTGGTTGCCATATAATCCAACCCCCGCAATTAA 13528 37 100.0 36 ..................................... GTCGTAGCACGCGATTGTTCCCACGCTTGCGTATCG 13601 37 100.0 36 ..................................... CAAGCTAAAGCGGTTCTAGGATTTCCGCCAGTAAAG 13674 37 100.0 36 ..................................... CGCGTTGTAGTTCATGATTCAAATTCAGTATATACT 13747 37 100.0 34 ..................................... CTTTACCTATAGCAGCAGCAACCACCCCAACAAA 13818 37 100.0 35 ..................................... TCGGTAATAATTTCATTTCCTCGTTTGATTATCTT 13890 37 100.0 36 ..................................... GCTATTCAAAGAGGACGATATTGTTAAGCTTGGCAA 13963 37 100.0 35 ..................................... TGTAAGATTGTTATGAAATCTGGTTTCCATGCTTT 14035 37 100.0 33 ..................................... AACAATAATTCCTAATTCTAGCTCTAGTTATTT 14105 37 100.0 33 ..................................... GAATTATATCTACTGTAGCGGGATCGGAAACGT 14175 37 100.0 32 ..................................... TAACTGAAACGTCCTTATGCCTCAACATAATG 14244 37 100.0 35 ..................................... CGCAGTGCAGGAGACAAACAAAAAACTTTAGAAAG 14316 37 100.0 34 ..................................... CTTTGTGCAACAAGTTCAAATTCATCATTAGTTG 14387 37 100.0 35 ..................................... CAATAGACCGAGTGTATTTCTTCTCTTAATGAATC 14459 37 100.0 36 ..................................... ACGCAGCAGCATCCCCACTAGCAGCCCAACTATCAG 14532 37 100.0 33 ..................................... TTCTTTACAATTATTATTGGCACAGTGTTTGCA 14602 37 100.0 36 ..................................... TCCTCGTAAATTTCAGGTACATTTACATCATATGGA 14675 37 100.0 37 ..................................... AACGGCATTCGTTACGGTTCACGCCGAGGCCATAACT 14749 37 100.0 33 ..................................... AATATAACACAACAGTATTTAGACGGCATAAGA 14819 37 97.3 34 G.................................... AGGATAAAGCCATCACACTCAAATTGACCATCAA 14890 37 100.0 35 ..................................... TTCCAAAACATTCAAGGTAATGCTCTTAAGTATAA 14962 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 51 37 99.9 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCTTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : GAATGGGCTGCTTATACTTGGAAGTCTATAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //