Array 1 1608-652 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSHN01000063.1 Phocaeicola vulgatus strain AM37-2 AM37-2.Scaf63, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 1607 33 97.0 34 ................................G TCAATTGTTAACACCAATCTCTTTTTCATATCCT 1540 33 97.0 32 ................................A TCCTTTCTTTTTGTCTCTTTTTGTGGTGGTAT 1475 33 100.0 31 ................................. TCTTCTTCGAGCAGACAGGACAAATACCTAC 1411 33 97.0 34 ................................A GTTGATAAGTTAGAAGGGATTACAGACCTTCTTG 1344 33 100.0 33 ................................. GATGTAAAAAACCTCAAGAAAGCCGACATCTAT 1278 33 100.0 33 ................................. GATGTAAAAAACCTCAAGAAAGCCGACATCTAT 1212 33 100.0 33 ................................. GATGTAAAAAACCTCAAGAAAGCCGACATCTAT 1146 33 97.0 32 ................................A TCTATCGGGGACTATTTTTTAGTACATATTCC 1081 33 100.0 33 ................................. TATCCCTTCCGGCAAATATATGACAGACAAACT 1015 33 100.0 33 ................................. CATTAACATCCACATCACGATGAGCGTACATCT 949 33 100.0 33 ................................. CCACAGGATAGGGAACCCCTACCTCTTTCTCCT 883 33 100.0 34 ................................. TTATAATAGGTTTCATGAATGTTCGGCATTTTGG 816 33 97.0 31 ................................A TATTCTGAACACATTGCAAATGTACAAAAAG 752 33 97.0 33 ................................A ATGACGAGGTGAATACGTGTATAGACAACCATA 686 33 90.9 0 ....................A.........G.A | TA [663] ========== ====== ====== ====== ================================= ================================== ================== 15 33 98.2 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAAATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //