Array 1 24991-24159 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKPG01000025.1 Enterococcus faecium strain P7 C A14 2837_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 24990 36 100.0 30 .................................... CAGATTCTTATACTTCTGACACTGTATCTC 24924 36 100.0 31 .................................... AACGATGCTTTCACAAAGAATTATGTTACAA 24857 36 100.0 30 .................................... GATATGCCTCTATACACTTATCATCCCCTA 24791 36 100.0 30 .................................... TGCATTGTATACATATGGTGCGTTTAGGTT 24725 36 100.0 30 .................................... GTCAGACCTGTTGTATACTCAGCTTCTTCA 24659 36 100.0 30 .................................... CTGTTGCTTTGTCTCACCACTAAATTTTTG 24593 36 100.0 30 .................................... GAACAGCATTGCGGATAAAGCTAATGGCGA 24527 36 100.0 30 .................................... TTCCAATGTTTCTCTGGTTACTTTATCTGT 24461 36 100.0 30 .................................... ATACCAGCTTTATAAATGGCTTGATCCACT 24395 36 100.0 30 .................................... TAATGAGGCTGACGTAAACAAATTATTAGA 24329 36 100.0 30 .................................... TGCAATGTTACACGAACTAAAAGAAGAAAC 24263 36 100.0 30 .................................... CCATTTCCTACGAAGCTTTTTTCTAGCTTC 24197 36 91.7 0 .........................A....T....A | G,CA [24162,24167] ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.4 30 GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Left flank : GCCAGCTCAATGAAAAAGTAGAAGTGAAATCAATGATTGATAAACTGACAGCGACAATCAGTGAGCTGATTGGGTACGAGTTGTTGGATCACGAACTCGATTTAGAAGGAGACGAGATCACGGTCTTGGAATTATTCAAAGCATTGGGTATCAAGATCGAGACAAGAAGTGATACTATTTTTGAGAAATTACTTGAGTTGCTTCAGGTTTATAAATACTTGTCTAAGAAAAAATTATTGGTTTTGATCAATGTGTGTTCCTATCTCACGGAAGAAGAAATAAGCGAAGTGCAAGATTATATTTCGTTATATCATATGGAAGTGCTATTTGTAGAGCCGCGTTCGATCAAAGGGATAAAACAATTTGTCTTGGATAAAGACTATTTCTTGAACTTGGAAAACATGGTATAATGGTAAAAAAGAGAAGCGTTCAAAGCTGAAGTTTTGCTATGAACGAGTAGCGTGATTATGAAACATTGACGGAAAAATTTTTTCTGCGAG # Right flank : ACAGCCTTGCACTTATCGAAAGAGGATTAGTGTCAAGGGTGTTTTTCATATGAGTGGACGGAATTATCTGTTTTCTTTTACAATTGATAATAGATACTTTGCTGTATAGTCAGTAGCTGATATAAAAGTATCGGCTCTTAAATGGAAAAAAGATAGGTGGCGACGCAATGTTTAACACACAATTGATCGGTTATTTAGAATGGATCATTGCTATTTTAAATATTTGTTCTATCGGTATCTTAATTGCTGGGATCGTTCTTGTTCTATTCAAACTTTTTGATTGGTCTCATGTCAAGAAAAACTATGCAGAACGTAATGCTCGTAATGCAGATACAAGAAAACTGTTAGCAAGTTATATTTTGTTAAGCTTGGAAGTACTAGTCGTTGCTGATATCATCGAGTCAGTTATCAAGCCGACTTGGACAGATATTTTGAAGCTTGCACTTATTATTATCATTCGAACAGTCATTTCTTATTTCTTGAATCAGGAAATAGAAGAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //