Array 1 21869-19400 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEGF010000105.1 Klebsiella variicola isolate k_variicola_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21868 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 21807 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 21746 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 21685 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 21624 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 21563 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 21502 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 21441 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 21380 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 21319 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 21258 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 21197 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 21136 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 21075 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 21014 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 20953 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 20892 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 20831 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 20770 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 20709 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 20648 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 20587 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 20526 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 20465 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 20404 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 20343 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 20282 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 20221 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 20160 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 20099 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 20038 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 19977 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 19916 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 19855 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 19794 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 19733 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 19672 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 19611 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 19550 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 19489 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 19428 28 82.8 0 ...........AT..-.........G..C | T [19415] ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //