Array 1 20532-24082 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMB01000001.1 Streptococcus equinus strain NBRC 12057 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 20532 31 100.0 40 ............................... AAAGCTGCGGTGGTTCAGCTATTGCGGCAACAGCACCAGG 20603 31 100.0 34 ............................... AAAGGGTGTTGCAATTAAATCACCCTCGAACACG 20668 31 100.0 35 ............................... AGCGTATCCGCTTAAATTTGCTAAACGAGCATTTG 20734 31 100.0 34 ............................... AGTGTCAGACTTATCAACAATGTCCATTGCCTGG 20799 31 100.0 34 ............................... AGCTAAAAGGCAAGCAATGTTAGAGGCTTTAAAG 20864 31 100.0 36 ............................... TTGGGTAAATTATAACTTATGGCTAAAGAAAAAGCG 20931 31 100.0 35 ............................... ATCACTTAGACCATGACAAGACCAACAACGCTTGG 20997 31 100.0 33 ............................... ATCAACACGATATTGAAAGCACTCGCGCACTCG 21061 31 100.0 34 ............................... TAAAACAAGACCGTGTTTTTTTTCTTCAGTGTCG 21126 31 100.0 36 ............................... AATTATAGATACGACCGAGGAACCGTTAACGTTCCG 21193 31 100.0 35 ............................... AAGGTGAAAACATGAAAAATAAATTCTATCGTATG 21259 31 100.0 36 ............................... GTCTTTATAATAAATATGTTGAACAGTCACGAAAAG 21326 31 100.0 35 ............................... ACTTTTTTTCACAAGCCTAAACCTGCGAAAGCAGG 21392 31 100.0 36 ............................... TATAAAGGTGGATTAAATATGTATAATGATAAGTAG 21459 31 100.0 35 ............................... TTACTCGAAACATTTTTAGCGTCATACGCTTTAAG 21525 31 100.0 35 ............................... AGTAATTGAACAAAGTTTAAACGAAAAAATTAAAG 21591 31 100.0 35 ............................... AGAAATCGAGGCGCAATCAAATAAGGCTTATCAAG 21657 31 100.0 36 ............................... TGACGAGTTTGAAAACAATAACCTAGCACACCCTTG 21724 31 100.0 34 ............................... ATCGTTAAATTAAATAAAAGCGTTTCGTCGGTTG 21789 31 100.0 35 ............................... ATGTATAAAAATGGAACTAGTGTAGTAAATGTTGG 21855 31 100.0 35 ............................... ACAAGGTGGCAGAGGATTAAAAATGATACAAGGTG 21921 31 100.0 34 ............................... ATACGTTGTTGGGTATTACCTACTTATGGAAGGG 21986 31 100.0 36 ............................... AAGTCTATCATTAATGGAAATATCATCTTCTTTATG 22053 31 100.0 36 ............................... ACAGACATGCAAAACACGTTACATTTTAATTCAAAG 22120 31 100.0 36 ............................... TCCAAACACCCAAGCATTACCAGCCATTGTAGATGG 22187 31 100.0 37 ............................... TCTTTGATGTAATCTGTGACCTGCTTACGCCACTTCG 22255 31 100.0 36 ............................... ACATTTAAAATTAAACGACTACCAAATCTGTGGTAG 22322 31 100.0 34 ............................... CACGATAGTCAGTTAAATAAATATTGATTACTTG 22387 31 100.0 34 ............................... TGAAAACACTAACCTTAATAATCCCGAAGAAGAG 22452 31 100.0 34 ............................... AAGAATATTTTAATTATGACAGAGCTAGATACCG 22517 31 100.0 35 ............................... TACTATTGTTTCGGTAACATTTGTAGCATTACTAG 22583 31 100.0 36 ............................... AATAGGTAGCGTTTAACCTTATCAGTAGTGATAATG 22650 31 100.0 34 ............................... AGCATTATATGGAATATCTTTAAATGAAGGAGCG 22715 31 100.0 35 ............................... AACCACAAAGAAAGAACCTGAAGACGTTAAAGACG 22781 31 100.0 35 ............................... AGAACAGTACATGTTTAATAAAGTTGTTAAGCTAG 22847 31 100.0 36 ............................... ACTTCGGGTACTACACATTTGCTAAACTGAGCAATG 22914 31 100.0 36 ............................... CTCAAAATGTCCGAGAAACCTCGTGGCTCATTGAAG 22981 31 100.0 36 ............................... ATCGTTATCTTTAAGTTCCATTTCAAGACCAGACGG 23048 31 100.0 35 ............................... TAATTTAAAAGGAGGTGATGGGAGGGTAGAACCTG 23114 31 100.0 35 ............................... TTCATCAGCAGTGTTAATATTTGTATTTTGTGAAG 23180 31 100.0 41 ............................... CAGAGAGTCAATGGGTAGAGCAAAATTTCAAAATGTTTAAG 23252 31 100.0 34 ............................... GCTCAAGCAATTGTAACAGTTTCTGGTGTATTGG 23317 31 100.0 35 ............................... AAGATAAATTCAGCCATTGCGATGGCCTGCTTATG 23383 31 100.0 40 ............................... AAGCAAAATGTCGGTGGTAAGATGACTGGTCTTGGCAACG 23454 31 100.0 35 ............................... ACCGTTTTGATAAAGTCTCGCTTTTAGCACTGTTG 23520 31 100.0 35 ............................... AAAAGTTAGCTGATACTGTCTACCAAGCAAAAGAG 23586 31 100.0 36 ............................... CTGCTGAATACAACCAACTTGAACTTTTAGACCACG 23653 31 100.0 35 ............................... TTTTGAAATTTATCTATTTCTTTAGCAGTTTGTTG 23719 31 100.0 36 ............................... AAATACTTCGCACGTAAACACTGCTTTATCGCTGAG 23786 31 100.0 35 ............................... AAAATGGGAAAAGGGGTCTAATATTCCGACAGGGG 23852 31 100.0 36 ............................... GAAGTTTTAAGGTTGTCGCTGATTTGACGGGGCTAG 23919 31 100.0 36 ............................... TAGAAATTCGACTGTTGTGTCTTTAGTATCAGACCG 23986 31 100.0 35 ............................... AGTTATCGAACAATCTTCAAACGATAAACCAAAAG 24052 31 96.8 0 .......................G....... | ========== ====== ====== ====== =============================== ========================================= ================== 54 31 99.9 35 TCGCACCCCATACGGGTGCGTGGATTGAAAT # Left flank : AAGACAATACGAGGAGAATTAGATTCTTATCCCCCATTTTTGATTTAGGAGTGATCTTATAATGATGGTTTTAGTAACTTATGATGTGAATACAGAGAGTGTAGAGGGACGTAAGCGTCTTCGGAAAGTTTCAAAATTATGTGTGGATTATGGACAGCGTGTTCAAAATTCTGTTTTTGAGTGTTCTGTAACTCCTGCAGAATTTGTAGAAATAAAGAACGAATTAGTATCGATTATAGATCAAGAATATGATAGTATTCGATTTTACCTATTAGGAAAGAACTGGCAAAATCGAGTAGAAACAATTGGGCGTGATAATAGTTATGACCCTGATGCTGGAGTCCTACTCCTGTAATTTATAGGCGAAACGAGGTCACACAAAAAAAGTTGGGACACTCGCGCTTAAAAAAGGTAAAATAGTACTATAAATGATTTTATTTATTAGAATAATTTTTTATCATAATAATCATTTATGGCATAAACGGTGCAATATCGCACCG # Right flank : TTAACAGGCGGTTAGGTTTCCAAAATTTTAAAACCTTGTATTCATATAAATTAAAAGGAGTCCCTATGTCATTTGAATCGGATATTTTTAGAAAAAAGCGTGTGGTGTTTGAGTGCTTGGTGGCATTTGGATTTGAGAAATCTGAGGCTGGTTATGACTACGCGGAGCTGATTTTGAATGGCGATTTTGAGGTGCGAGTTCATGTTTCACTGGATGGTCAGGTGTCAGCAAAGGTGATTGATACTGATTTAAATGAAGAGTATCTTGTTCTTCATGTGGCTGGTGCGAGTGGCAATTTTGTTGGTAAGGTTCGTGAAGCTAATCAAGAGGTTCTTGAAAGAGTGGCTGAAGCTTGCTTTGAAGCTCTGCCATTTGCCAGTGACCAAATGAATCGTCTTGCAAATCACCTAAAGACCACTTATGGCGATGATTTTGACCATCCTTTTGAAAAATATCCTGAGTTTTCTTCTTTTCGCTATCCTGAAAATCAGAAGTGGTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //