Array 1 4968418-4967390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069318.1 Delftia lacustris strain R54 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 4968417 32 100.0 35 ................................ GCCGAAGCCTTGTTGGCGGGCAAGTCGAACAAGAT 4968350 32 100.0 35 ................................ CTGAGGCTGCTAAAGGGCGCAATCGCGACGTGACG 4968283 32 100.0 34 ................................ GGGCTATGCGAGCAACAGCGCTCTACGCTTTCCC 4968217 32 100.0 34 ................................ TACGACAAGAAAAAGCGGCGCTGGGATCTGCGCC 4968151 32 100.0 36 ................................ GGCGATCAACAGCGGGAAGGTGATGGCCGGCCCGTT 4968083 32 100.0 34 ................................ CGATCTGGTCTTTGCCCACGCGGCGCAGCTCGCG 4968017 32 100.0 33 ................................ ACGCCCAGGGTCTTCTGGGCCACCTGCAGGGCC 4967952 32 100.0 36 ................................ CACGGCTCAACTCGCTGCGGCTCGGGGCATGGTCTA 4967884 32 100.0 36 ................................ GTCTCGTCAAAGCCCAGCCACCGGCCCGCCAGCGTG 4967816 32 100.0 33 ................................ CTCGTGCAGCATAGGTCGTGGCGGCGGTGGCGG 4967751 32 100.0 34 ................................ GCGAGCACCCATGCCGGTCAACATGGTGGTGTAG 4967685 32 100.0 34 ................................ CACAAAGGCCTTTCTCATCCTCAGCGGTCCGCCG 4967619 32 100.0 34 ................................ TTCGCTGCCGACTCGGCGTGCGTCTTGAGCTGAT 4967553 32 100.0 33 ................................ AGGCAACAACCTTCTACGTGGACGGCGCCGGCA 4967488 32 100.0 35 ................................ GGATTGCCCAGGAGCGGCGCTGGCCATGCAGGCCC 4967421 32 90.6 0 ........A.......T.............G. | ========== ====== ====== ====== ================================ ==================================== ================== 16 32 99.4 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : AGGGCGTGAACTACGTGACCGGCGACTACTCGCGCGGCGTCAGCGGCTTCTGGGTGGAAAACGGCGAAATCGCCTTCCCCGTGCATGAGATCACCATCGCCGGCAACCTCAAGGACATGCTCAAGGGCATCGAGGCCGTGGGCGCGGATGCCTACAACTACGGCGCCAAGACCGTGGGCTCTATCCTGATCAACCGCATGAAGGTGGCTGGTAGCTGATCGGCTTGCGGCTGCGCATGCTGATGAAGAGCGGCCTTAAAGGCCGCTTTTTTGTGGGCACCCAGTCACCGCGTGCCCCGGCCGCAGTTGGCCGCACCAGCTCGCGTCCCGCGAACCCCAAGTGACCTTTGTCCTCCCCTGAGGTTCGCATTTCTGCAAGCCGTTGTTTTTGTTGAGGCATCACTGCGTCTGTCGTGGTCCTTGCCGTTTTTCCGTGACAGAGCGCGCAGGTTCGCGATGGCGAAGCTTTTTGCAGTGGTACGGCTGGGTTATAAGCATGCC # Right flank : ATGGCCATCAAGCGCGAAATGAGGGGTTCTGGCAATCGCTGGCAGCCCGATGCCTGCATGCCGGCAAGGCGCTGTCCTACTGGATGTGCAGGGTTTGGGAAGGCGACACGACTGATTCAAATTGTCAAATTTGTTCCTGAATGTGTTTCCTCCGTGCCAGCAGTCTGGCCGGTTTGCGTAGGTGGTTCGAGGGAGAGCGACGTGGGTTTTCTGAGGCGTATGAAGTTGGGAACCATGCTGGGCATGGGTTTCCTTGCGGTGATCGTGGTCTGCGTGTGCGTGGCCGGCTTCGGCTGGATGAAGCTGCACGATCAGGGGGAGCAGTTGCGTGTTTTGGCCGAGGACCGCATGGGCAATCTGGCTCGGCTGCAATCGCTCAAGGACAACGCCAATGTGTCGGCGCGGGTGGTGCGCAATCTGGCGCTGATCACCGATCCGGCGCAGATGGCCGAGGAGAGCCGCCGGCTGGATGAGGTGGTTGCCAGGAACGGCCTGGTCAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4991136-4989916 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069318.1 Delftia lacustris strain R54 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 4991135 32 100.0 33 ................................ CTTGATGAACACGCTGCCGTTTTCGCTCAGGCG 4991070 32 100.0 33 ................................ CCGACGGGCGCGACATGGAGACCCTGCTGCACC 4991005 32 96.9 35 ..T............................. CGGTCAAACGTGTGCACGTAGACGGTCTGGAAGTT 4990938 32 100.0 34 ................................ TCGCTCTTGATGCCCTTGGCATTGAGCGCCGGCA 4990872 32 100.0 33 ................................ CCGTCACCCCTTGGCGCAGCGCATGAAGCGCCG 4990807 32 100.0 34 ................................ TGGAATGAGCAGCACCGAAAACCAGGCCACGGGC 4990741 32 100.0 34 ................................ ATGGCCGTGCCCTCCGGAAGGACCACGCGATCAT 4990675 32 100.0 33 ................................ CGCCAGCACACGCATGCGGTGCAGGCGCGCGGG 4990610 32 100.0 34 ................................ AGTCCGTCAACGTCGCCTGCTGCAGGCGGCAGCG 4990544 32 100.0 34 ................................ GCCGCAGTCGTGCGTCGTCTCGGCCACGGCGTAG 4990478 32 100.0 35 ................................ AAGGAAATCGACCTGCTCACGCGGCAGATGGAGCG 4990411 32 100.0 34 ................................ CTTAAAACAGCCAATACCGCCTGCACCCGGCGAT 4990345 32 100.0 34 ................................ AGGCGGATGTCGCGGGGCGTCATCCACAGCCATT 4990279 32 100.0 36 ................................ GTATCCGCCACCGTCACCGCCTGGCCCTCGGTCTTG 4990211 32 100.0 34 ................................ ATCCAATGACCGCGGTGCATACGGCGATCTCGAC 4990145 32 100.0 35 ................................ AGTGCCCTGGGAAGGATCGACGCGCAACCGGCGCA 4990078 32 100.0 34 ................................ ACGGCGTGCTCCACAAAGCCCACCCCGCCCTCGC 4990012 32 100.0 33 ................................ GACCCAGCTCCACGCTGTACCCGTGCAGCCCCT 4989947 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 99.8 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CCGGCGATGAGAAATGAGGTGTGCCGATGATGGTCCTGGTGAGCTATGACGTCCATACCCAGGACCCGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGCGCGCAATACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGCCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATCGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAACCTCCGCGCGAACCCCAAGTGACCGCCACCTGCCCTTGAGGTTCGCGGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGTGCGAGGGATTGGCTGAACGCCGATTCCGCGGCATGACAGCGCCGCCTGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCTGCCGCCACAGCAAGCGCCCCACGCATTTGAAACGAATCGCCTGACTCACTCCTCGCCGCGCAGGCCGCCATTGAGAGAGAGCCCAGCCACTGCCTGCAGCAGGTACCCGCGTGCCTCATCCAGCGAGGGACCTGCATGCCCATCGATGCGCCGAATATAGGGAGACGTCAGCACAGCCAGGGCATGGCCATCGGGCCCGAGGATGGGGCAGGAGATGTCCACCACGCCATAGGACTGCAGGCTTTCGCTCTGCTTGTGACCCGTGCTGCGTATCTGTTCCAGCATGTCGTGCAGTTGTGCCTCGGGCAGTGGCACCTCGCCTTCCAAAGGCGTGTGCTCAGCCAGCATCTGCGCGCGGCGTTCGCGTGTCTGGCAGGCCAGCAGCACATGGCCTGACCCGGTGTCCAGCAGCCCGACGCGTGCACCCAGCCTGATTGACAGGCCCCAGTTCCCGGGGCCGGGGACCTGGGCCACGATCAAGACGTTGCCACGGTCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 6180180-6174812 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069318.1 Delftia lacustris strain R54 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6180179 28 100.0 32 ............................ TGTACTGCGGGAAGCAGCGCTTCGGGAATCTA 6180119 28 100.0 32 ............................ TGACCCGTGCTTCCAGATTTCGACCAGGTCGA 6180059 28 100.0 32 ............................ CTCGCAAGCCGAGGCGTTTCGCACGTTGGCAA 6179999 28 100.0 32 ............................ TTGAAGAGCTGTGCCACGAGCCGCCCCATCCC 6179939 28 100.0 32 ............................ GATCGACCACGAGTCGGAAGAAGAAATGAAAG 6179879 28 100.0 32 ............................ TGTGCCCCCACCTGTGCTGCCACCCGTGCCAC 6179819 28 100.0 32 ............................ ACCAGGAGCCGGCATGCCCTCTTCGTCTTCGT 6179759 28 100.0 29 ............................ AGCCAAAAAAAGCGGGGCTCCGCCCCGAC 6179702 28 100.0 32 ............................ AGCAGGAGCATAAACAGTCCGGTAGTAGCAAT 6179642 28 100.0 32 ............................ TGGGCTTGCACCGGCATGCATGCCGAGTGGTC 6179582 28 100.0 32 ............................ ACGTCCTGCACGACGGCTGCAAGGACGCATGG 6179522 28 100.0 32 ............................ TGGCGCACGGCCATGGAGGCACTGGGCTACAT 6179462 28 100.0 32 ............................ GCTGATCCTCAACAACACGAACAGCAAGAGCA 6179402 28 100.0 32 ............................ AAGCCCTCGCCACCCTCGGTGTTGAGGTGGTG 6179342 28 100.0 32 ............................ TGCAGTCGTCTTTGGAGAGCAGGTTGCGAGCC 6179282 28 100.0 32 ............................ TGCCCTGGTGTTCGTCGCTGCTGGTTCGGCTC 6179222 28 100.0 32 ............................ AGAGCACGGCAGGCCCGTCCATGGCCGTCGCA 6179162 28 100.0 32 ............................ AGAGCGTGAGCCTGTGCACTCGCCGCGAAGTC 6179102 28 100.0 32 ............................ AATCGTCAGCGTCTGAACCGCACTCCGGGGCC 6179042 28 100.0 32 ............................ TTGGGCGGCGAGTCGCAAAAGGGCCGCTGGCT 6178982 28 100.0 32 ............................ CTGTTCGCGCAGCACGGCGACGAGGCCTACGA 6178922 28 100.0 32 ............................ GCCTTGGCAGATCCCAGAGGTGCACAAACCAA 6178862 28 100.0 32 ............................ ACTGAGACAACAAAAGTGGACCAGACCGAGCG 6178802 28 100.0 32 ............................ GTTGTGCGGCGGTAATTGTGGCGGGATTGAGG 6178742 28 100.0 32 ............................ CGTCAGAGGCCTGGAGCAAGCCGCACGGCTGG 6178682 28 100.0 32 ............................ TTGCGCCCAGACCGCAATGCAGGCAGGACGTG 6178622 28 100.0 32 ............................ CTGCTTTTCCGGTGTCTGACGGCTTTGAGTAT 6178562 28 100.0 32 ............................ AACATGGAAGACAGTGCGCGCAATAAACATCA 6178502 28 100.0 32 ............................ GCTGCCAGAGCTGCCCACGCGCGGCTGCCTGG 6178442 28 100.0 32 ............................ GAGAGGCGGTATCGCAGGGTTTTGCGGGAGCG 6178382 28 100.0 33 ............................ TTCCAGGGCCGCGATGACCATCCATTTTTGAGC 6178321 28 100.0 32 ............................ ATTAACGCAAGCCGCCCGCTGTGTGTCTGGGA 6178261 28 100.0 32 ............................ TTTACGTAGCGGCGTGCGTACTCCCACGCTTG 6178201 28 100.0 32 ............................ GTACTGCGGCAGCGGCGCCGGGAACACAGGAT 6178141 28 100.0 32 ............................ ATCGGAATCCACACCTTGCCATCGCGCGGATC 6178081 28 100.0 32 ............................ TGCAAAGGGAGGCGGCTACGTCAATGCTGAAA 6178021 28 100.0 32 ............................ TGTGGCTCTTGCCACCTGTCGCGCTTGTCGCC 6177961 28 100.0 32 ............................ AGCCCAGTAGCTGGCATCTGTGTAAACCACAC 6177901 28 100.0 32 ............................ TACTACAACGAGATCGACCCGTATGCGGCCCA 6177841 28 100.0 32 ............................ AACCGTGTAAAGGAGCGAAGGAGGTCGATACA 6177781 28 100.0 32 ............................ AGTGGGGAGATGCAGGCCGGGCCGAGAACATG 6177721 28 100.0 32 ............................ AGTCGTGGACATGCAAGGCGTTGATATGGGGA 6177661 28 100.0 32 ............................ AACCGCAGCGATGGCGATCTGTCCGGCCTGTC 6177601 28 100.0 32 ............................ AGCCCACAAAGTCAGCAATGGTTGTCTTGAGC 6177541 28 100.0 32 ............................ ATGTCAACGCTTGTCGCGCGACGTACCCGGCG 6177481 28 100.0 32 ............................ ATTCGCGACTTGCATGCGCTTTCCCGTTCGCC 6177421 28 100.0 32 ............................ TGCTGGGAGAGAGCCAGTGCAGCCTCCTTTCC 6177361 28 100.0 32 ............................ CTTCTCCGTGTACTTGCTGCTGCTCTCGAAGT 6177301 28 100.0 33 ............................ AGGTCGATCAGGGCATAGACCTTAGTGCTGTCA 6177240 28 100.0 32 ............................ TCTTCGATGGTCACTTCGCCGCCGAAAAAATC 6177180 28 100.0 32 ............................ AACTCAAACACGAACGGGCGATCGGACGTGAT 6177120 28 100.0 32 ............................ TTCGCCCGGTCTCTGGCGGTCCGCTAGTTGAA 6177060 28 100.0 32 ............................ TTGATCCGGCTTATTGCAAAAGACCCGCGCCG 6177000 28 100.0 32 ............................ TCACCGCCGCAGTGGTCATGCACCGCATCAAC 6176940 28 100.0 32 ............................ TTCAGCGCATCAGTCGACAGACTGCCGAGAGC 6176880 28 100.0 32 ............................ TATCTCTACATCGTCGGTTGCAGCCGTGAGCA 6176820 28 100.0 33 ............................ CTGTCGCGCTTGTCGCCGCGCTCGCGGGCTCGC 6176759 28 100.0 32 ............................ ATCTCCAGAAACATCTGTCCGATGACTTCGAT 6176699 28 100.0 32 ............................ GGCCCGAAGAGCACCGATGCGATTGCCACGGC 6176639 28 100.0 32 ............................ GAATACGAGCAGATGTGGCTCATCCGCCCCCT 6176579 28 100.0 32 ............................ TTGTCGAACCACATCATTCGGCTGCCGCAGCA 6176519 28 100.0 32 ............................ TGCACAGCCGTACTCCAAGAGTTGGCAGACCG 6176459 28 100.0 32 ............................ TCATGGGCGAAGTTGGCGCGGGCCAGGGCCTC 6176399 28 100.0 32 ............................ GAAGCGGGTTAGTGTGGGTGCAGATAGATTAT 6176339 28 100.0 32 ............................ TCGATCTCGCGGTCGCCGATGCGGATGGTCTT 6176279 28 100.0 32 ............................ TTCGGGGTTGCTGTGGTTGGCCAACTGCCCAG 6176219 28 100.0 32 ............................ ATGCAAGAGGCCAAGACTCTGCTGGAGTTCAA 6176159 28 100.0 32 ............................ ACGGGAGGGCGGTAGTCGTCACTCGCCGCAGC 6176099 28 100.0 32 ............................ GGGTCAATGGCCGCAAAGGCGTCGATGTTGAG 6176039 28 100.0 32 ............................ TTCGCTCGACACCACAAATGTGATCTGCTCCC 6175979 28 100.0 32 ............................ GTCGCGCTGGCCGAGGCCGCGAACCGAGAGGC 6175919 28 100.0 32 ............................ TGCAGTGCTGCCAGGCTGCCGCAAATGCAGGG 6175859 28 100.0 32 ............................ AATGAAAAAGGCCCGGAGCGGTGAAGCTGCGG 6175799 28 100.0 32 ............................ TCCACCGGGATGTGAGTTTTGGCTTGTTGCTC 6175739 28 100.0 32 ............................ TGGGCTTCGGCCTGAGCACGCCGGCCGGCCAA 6175679 28 100.0 32 ............................ CATAAGCCCTCCCGGTATGCCTAGAGGGCTTT 6175619 28 100.0 32 ............................ GTGTGGTCCATCGGCATCTTCATGATGGTGTG 6175559 28 100.0 32 ............................ AGCTCTTCGGAGCGTGCGTTGTTCGTCGGAAA 6175499 28 100.0 32 ............................ TATGCAGAGCTTGGGGACGCTGCAAAGGTCAT 6175439 28 100.0 32 ............................ GTCGCCATGCAATGGGCCAGTCGGCGGACCTT 6175379 28 100.0 32 ............................ GGCTGGCCGCATCGGGCGGTGATGGTGTCGCC 6175319 28 92.9 32 ...........TG............... AAGACCGAAAAGGGCGACCAGGCCATCATCCA 6175259 28 96.4 32 ............G............... ATCTACCTGGCCTGCACCGTGGCGCTCAACGA 6175199 28 100.0 32 ............................ TTTGGTCTTTCCCCTGATGTCGTACAGGGCAC 6175139 28 96.4 32 ...............A............ ATACAGGCTGTCACCAGCAGTTGGTCTGCACA 6175079 28 100.0 32 ............................ GGCGCCAAAGCAGACTTTGGAGAGGATGTGGC 6175019 28 100.0 32 ............................ AATCCAGGTCCTGGGTATCCAGGATCAGGGCC 6174959 28 96.4 32 ............G............... GCGCCCCACTGGGCACAAGGAGAGCTGACATG 6174899 28 92.9 32 ............G........A...... AGAGATCACGGCGAGCTTGTTGCCAGGATGGT 6174839 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 90 28 99.7 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : CGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTACCAGAGGGCGCCGTGCCCTGCCTGGTGCAACGCCGGCAATTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCTGAACAGGCTGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGCACGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTGCTGTTCCCTGGTTCTGATCCTTTTTTCTGGCGGCCTGAAGACTGCCTTGTAAATCAACAGCTTGGCGGATGCCCCGGAATTTGGGGTGTTCGCCTGCTGGAGGTGGAAGCTCTTTCAAAATCAATGGATTAGGGAATTTTTTGCCTA # Right flank : GCTTGCGGATGCGACAGAGACTTCAGCCCTCCGGGCCATGCTCCGCGTATTCCACAAAGGACGGTGCTTCATCAAACAGTTGCAAGAGCAGTTTCAGGCGCCGGGCGTAGAGGCTCTGTGGCCGGTTGAAGGCCTGGGCTGCCAGGGCGATGGCTGCGCGGGCGAGGTACCACTCGTTGTCGAATTCACTGGCGTCCTCGAATACCTTGTGCCGGATTTGCCGGATGTGGTTCAGCGCCAGGTCTGCGGCCAGGTCCACCTCTACATCCGCGTCATGCCAGTCCATGTCGGCACAGCGTGTTTCGATCAGGGCAACCAGCCCCCTCTCTGCGCGGGCAATGGACAGGGCGATCATTTGCTGCATGGTGGGCCAGGCAGCGGTGTCCATCGTGCAGGGCTTGTTCGTTGAGTGCCGTGACGCAGCCATATCGATTCCTTTGTCGTCGCTTCAATGACTCGGGCTTTCTATGCACGATCTATGCACTCAATATTCTATGCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //