Array 1 93179-91992 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACCHH010000006.1 Escherichia coli strain GCPRC20A Contig_6_135.488, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     93178	    29	 100.0	    32	.............................	AACATTAAATTGCCGTGCTGGATGAATCGCGG	
     93117	    29	  96.6	    32	............................C	TGGATCAGCTGGTTCAATCGTTTACAGCACTG	
     93056	    29	 100.0	    32	.............................	TCGTTCGAGGCGTTTCGCGCCTGGGCGATTAT	
     92995	    29	 100.0	    32	.............................	TCGAAAAACTTCGTCCTGAAAAAATTCATCAT	
     92934	    29	 100.0	    32	.............................	GCAGTAAATTATTTGACCTCGTTGATAATCCC	
     92873	    29	 100.0	    32	.............................	ACGTCTATCATTTTCAGTACAAGCTGGGTTTT	
     92812	    29	 100.0	    32	.............................	GACGATCCCGAGATTCACAGAGTTACAACTAA	
     92751	    29	 100.0	    32	.............................	GAAATTTTCACATGGATTGTAGCCCTGTATAT	
     92690	    29	 100.0	    32	.............................	GCCAGGCGGTCGGATTAGGTGCAAATCAAAAT	
     92629	    29	 100.0	    32	.............................	TCGGGCGGCTCTGGTGTTCCTGACATGGCGGC	
     92568	    29	 100.0	    32	.............................	AATTTGCATCACATAGGGGCGAGGCTCAGTGA	
     92507	    29	 100.0	    32	.............................	CCAGCCGTTCAGTATTGCCGGTGTCAGCAAAA	
     92446	    29	 100.0	    32	.............................	GAAAAGCTACTTTTGTGTTCAACTGATGCATT	
     92385	    29	 100.0	    31	.............................	CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 	
     92325	    29	 100.0	    32	.............................	TTGCAAACCGTGGCAAACGCAATTAACAAAAA	
     92264	    29	 100.0	    32	.............................	CTTCTCCACCGTTTGGCGAATCGGTGTGAGGG	
     92203	    29	 100.0	    32	.............................	ATTGTTATAATTATTTATTGAAATATCATTCC	
     92142	    29	 100.0	    32	.............................	AATCTATTGTGAATTTGAAATGGTCCAGCACT	
     92081	    29	 100.0	    32	.............................	GGTAAAAACACGGTCTGAACCGACATTCATGT	
     92020	    29	  96.6	     0	............T................	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.7	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   AAATATTGTAGTTTACAGAGAGCGTCGCAAGTCATTGTTTGTACACAAGTAATTGAGCAAAGCGTGGATATTGACCTGGACGAAATGATCTCCGACCTGGCCCCTGTTGATTTGCTGATTCAGCGAGCAGGACGATTACAGCGGCATATCCGCGATATTAATGGTCAGTTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//