Array 1 18160-19846 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAM01000069.1 Sporomusa acidovorans strain Mol, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 18160 30 100.0 37 .............................. CCCCATACGATCACAGGCCAAATGTATGGACTGCCAG 18227 30 100.0 36 .............................. AATTCATTTTGATTCTCCTTTCAGCATAACCCCGGC 18293 30 100.0 36 .............................. CTCCTCTTCACGCGCCGCTTTATCCGCATACGCCTT 18359 30 100.0 36 .............................. TCTGAGTGTTAAACGGCGGCAGCGCAGTCCAGAATC 18425 30 100.0 37 .............................. TATCCATTCCAAAGAACCACCAAAGCATTCTTGCTAA 18492 30 100.0 36 .............................. ATCGTCAACAAAATAAATGCCGTGAGTGTGCTGATC 18558 30 100.0 37 .............................. TACCGAGAACATCCACACGATTTTATTTTCCCCGCAA 18625 30 100.0 35 .............................. TATGCATTAGCTTGCCGGCGTAAGTGCCGATAAAC 18690 30 100.0 38 .............................. ACGAAATAACTGGATATACACTAAATGAATATGGGAAA 18758 30 100.0 37 .............................. TCGCAGGCCCGATAAGGGGCCGGGCAAAGGAGGATGA 18825 30 100.0 37 .............................. ACTGTTGTCGTGCAATTCGACCCTCCGCAACCAAAAT 18892 30 100.0 35 .............................. GTATAACCGTCCGCAGGCTGTACACTTGCCCCACC 18957 30 100.0 35 .............................. TTGGTAATGTCCGGGCAAGGTAATACCATAGGCAT 19022 30 100.0 37 .............................. CACCGCCAAGGCGATATTGGACCGACAAATTGCCCGC 19089 30 100.0 35 .............................. ATCAAAAACACGGGATAGCTCCGATACTGTTGTTA 19154 30 100.0 37 .............................. TTAGCACCTTATCCCCATCATGGATTCGTGCGCCCTC 19221 30 100.0 36 .............................. ACGGCCAGAACTTCGGTATGTGCGGTAAATCGATAG 19287 30 100.0 37 .............................. TATCTGCATCCAGACCGCCTTCGACCACTGCGGCAAG 19354 30 100.0 37 .............................. TATTCGCCGCGAGTCATAGGCTCACCATGAACAATCT 19421 30 100.0 36 .............................. AAGAACAGATCGAAATCATGAAATTCTATCCGCATA 19487 30 100.0 35 .............................. ATCTATAAGGCAAGACCGTGGGAGCAATACTTCTG 19552 30 100.0 38 .............................. CGAAGCTGAGCAATAAAAGAGGCCGCACTCGGGTCAAC 19620 30 100.0 35 .............................. GCAGATCAGTAGCTTCCTCGCCTAGATGTTCTAAT 19685 30 100.0 36 .............................. CTGGATGGCTATGAATGGCGGAAACGCGAAAGAGAA 19751 30 100.0 36 .............................. TTAAAACATTCCGAGAAACTAACCACCGTCAACAAT 19817 30 96.7 0 .........................T.... | ========== ====== ====== ====== ============================== ====================================== ================== 26 30 99.9 36 GTTGTTAGCTTACCTATAAGGATTTGAAAT # Left flank : TAAGCTAAAAATGGAACTGGACAGGATTATTGTTGACAACGAAGATTCAGTAATCTTTTATACCTTACGGACCACCCGTTATTCTCAGCGGGAGATTATGGGACTTCGCAAGGGAGGGCAGGACTTGATCATCTAAACTTTCGTCACTGCGTATTTCGGGGGATGTCAGATGACGGAGTTGGTGACATTCCTAGAGCAGCGAGATAGGATGTGGATCTGGGGCTGGAGTTCCGTCCCCTCGACACCCTTAAATAACTCAAGGGTTATAGGGTGATCCCGGTAAAAAACCAAAAATTTCAGCAGGAAAATACCAAGTTATTCCGGAATATGTTTCATAAACTTGGCCAGGATTAAAACATGTCGTCGATGTAAGGTAGCGTAAAAATGCCAGGAGGTCGACGACAAGACATTTCAGCTTTTTCGCGGAGTTTCAGTTTGAGCAAGAGGATCTAGTCAAAGCAAGAAAAAGTATAAAGCCCGTGTTTTCTTGTGTTCGATTG # Right flank : TATATAACCGCCAGTTGTAGTTCCAATGCTGGTAACACCGTTGTTAGGCTAGCAAAGGAAAAGATGGTAAGTATAGCCAATGGGTAAATATAACCGCATAGTCCATTCAGTAGCGATACGCTCCATTCTATTAATGAATGGAGTGTTTATTTTTATGTACTATTATGTATTTTATATACTTAAATTTACTAAAAGTGGTATAATTTTAATTACTAAGTTATCTAAAAGAGGGCTTATTATGGAAATAGATTTAAGTCAATTACCTATTTCACAACTATTTAAAGATTACAAACATCGAATAGAAAGTAAATCTAATCGAAAAATATCTTTATTATTAGAAACGAATGAAATAGTAAATTATCCTGCAGCATTTTATCATTCTAATGATAACTGCATTCTAGTTCGGGTTAACCCAGGATTAGAGAAGGATATGTCAATATTTGAACCAATTATTGCTCATGAAATAACTCATGGGTACTTGAAATATAAGTGCAAGTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGATTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 1291-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAM01000123.1 Sporomusa acidovorans strain Mol, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1290 28 93.3 37 --............................ TGTCTATCCATGTCAACGCTGCAGAGAACCCGGACGC 1225 30 100.0 36 .............................. CGATATCAAACGCCGATAGCATGGGATGTAGACTAT 1159 30 100.0 36 .............................. CGTTTCTATGAATTTGATCCGCTTATGCCCTTCGGT 1093 30 100.0 38 .............................. ACTTTCATGCCTGATTTGCCAAGGCTGATCTCGCACAC 1025 30 100.0 36 .............................. CCAATACACTCTTAGAATTAAGCGACTGCTATTTAT 959 30 100.0 38 .............................. GAGCGAAACTCTTTTTAAGATGCAAAAAAAAAGAGGCG 891 30 100.0 38 .............................. ACCGCCCTGGCTTTTTCTGCCGCCAGGGGGGCTAACCC 823 30 100.0 35 .............................. ACCCTAAAGACGGCCTAACCGCCGCCCAGGCCAAC 758 30 100.0 37 .............................. TCAGCAACATCATTCACGGACGCACGCAAAGCCGGAG 691 30 100.0 36 .............................. CTGTCGGAGTAAAATTCACTAATTCTTCCAGGGTCA 625 30 100.0 36 .............................. AGATATTGCTGACGTATTTGTTCTGCCTTTTCTCTC 559 30 100.0 36 .............................. ATGAGCAAAGAGAACGTCTTATTGCGTATTGCAAGG 493 30 100.0 37 .............................. ACCGTGACCTCACTAAGCACTGCCGTTTGTAGGCCTG 426 30 100.0 35 .............................. ATTTGCCCAGTGCCTCATAGGCTGATTTTATTTCC 361 30 100.0 37 .............................. CAAGCTAGGACGGTGATATGAATGGATTATAATCAAC 294 30 100.0 38 .............................. ACGTTTCTGTTACTCAGACAGGGAACATTGTTAGCCTA 226 30 100.0 35 .............................. GCTTCTTAGGGAAATTAACCCAACAGAGCAAGAGC 161 30 100.0 36 .............................. GCAGAATGGGCGCACACAGGGTTTAAGCGGCGGAGA 95 30 100.0 37 .............................. TGTCTATCCATGTCAACGCTGCAGAGAACCCGGACGC 28 28 93.3 0 ............................-- | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 99.3 37 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : | # Right flank : A # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 20061-20418 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAM01000057.1 Sporomusa acidovorans strain Mol, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 20061 31 100.0 34 ............................... GCAGGATAGGGCGAAAGAATTGGGGGGCAGAATC 20126 31 100.0 33 ............................... TGTGTCGGTAAGCTGCAGCGGTCCCGCATTGAC 20190 31 100.0 36 ............................... AACAAATGGACTTTCTGGCGCCTAACCTTCTCCGAA 20257 31 96.8 35 T.............................. TTTAAATCGCATTGCGAAAACTCAATTTATAAATT 20323 31 100.0 34 ............................... CAAGGCTTGTCCGTACTACCATTCAGCCTACGCC 20388 31 93.5 0 A......................A....... | ========== ====== ====== ====== =============================== ==================================== ================== 6 31 98.4 35 CGTTGTTAGGCTACCTATAAGGATTTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCG # Right flank : CTAAATATAACATCCCAATGAGTTCAAAGTTTTTACGGGATTAAGAACAAAAAACTCCGTACGCAGTAAGACTTATAGATTATTTTTTAAAATCAGTGGTAGTTACTTGCTTTTCATTATTAATTTTGCTACAATGTAATTACAAAGTAATTACGTTAAAGGGTGATTAGATGAAAGCAGATGTTATTAAAATTGGTAATTCAAAAGGAATAAGATTACCGGCATCAATTCTTAAACAATGTGGTATTGACAAAAAAGTCGAAATTGAAATTAGACATAATAATATAATCTTAAGACCAGTAAAACAACCACGCGAAGGTTGGTCTGCTGCTTTTAAGGAAATGAGCAAACGCGGAGATGATCAATTACTTATTCCAGAAATTGACGTTGAAATCTTGGAGGAATGGGATAAATGATTGATCAGTATTCGGTATATTGGGTAGATTTAAACCCTACCAAAGGTGCAGAAATCAATAAAATGAGACCCTGTGTAGTAATCT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTTGTTAGGCTACCTATAAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.60,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 94717-94554 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAM01000011.1 Sporomusa acidovorans strain Mol, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 94716 30 100.0 36 .............................. TACCGATAGTCATAAAGACGAGCATCACAAATTCAG 94650 30 100.0 37 .............................. CCCACGTAGGCAGTCGGAACTACCACAGACACAAAAG 94583 30 93.3 0 ............................NN | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 97.8 37 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAGCCTACCTATAAGGAATTGAAACTGTCTATCCATGTCAACGCTGCAGAGAACCCGGACGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTTTAGCCTACCTATAAGGAATTGAAACTATCTATATTATTTGGGCCAGAATTAAGGTATGTTACTGTTTTTAGCCTACCTATAAGGA # Questionable array : NO Score: 8.56 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.62%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 96042-95880 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNAM01000011.1 Sporomusa acidovorans strain Mol, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 96041 30 100.0 35 .............................. CTCATCAGTCAATTCTGGAATGCTTTCGATTTCCT 95976 30 100.0 37 .............................. TGTCTATCCATGTCAACGCTGCAGAGAACCCGGACGC 95909 30 93.3 0 ............................NN | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 97.8 36 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : CAATTGCAGGCGATGCGGGAAATCTTGCAAGCTGAATCCGGGATTCAATCTGGGATTTCCGTTTTGCACAGCGGTGACCGGGTCATTAAATTACTGGGCAGCAGCGGCCAGCAGCTAACGGATGTATGCCAAAGAATGTGCGCCTACATCCGATAATGATTTTTCTACCCGGAGTATTTTAGAGGAAGCGTACCTAGTTTTTGAAAAAAGTGGCCTTTTTAAAGGAAAGGTTATTTTTTCTTTCCCATAGATTTACACTCCTGTAAAAAAACGAAAAACCGGCAGGAAATACCCTCTTATGCCAGAATATATTCCATAAATCTATCCAGCAAGGTCTATGTCACCCCGGCCTTAAAAATGTCGTCGATGTGAGATAGCGTAAAAAAACCGGGAGGTCGACGACAGAACTTTGTAGACTTTCCGCGGGTTTTTTGTTTGAGATAAGCAGTGGGTGTATTCAAGAGGGAAAATATAGCCTTGTATTTTCTCGTATGGAATGG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 8.56 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //