Array 1 45086-45579 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVHS01000001.1 Bacillus anthracis strain AFS072084 AFS072084_96_B1_Contig1_140514, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 45086 32 100.0 33 ................................ TTAACTAAAGCAGAAGCTAAGAAACATATTGAA 45151 32 100.0 34 ................................ TTAAGAATGTTATATCATAAAAAAAGATCAAACG 45217 32 100.0 34 ................................ GAATACGATTATCAAGATGAAAGCACAAAAAAAG 45283 32 96.9 33 ...................T............ ATGCCAATCGGTGTACAAGCCGACTTCATTAAC 45348 32 93.8 34 .........T.A.................... TACCTCGGGTTTATATTTATCTGGAACGCTCATA AA [45361] 45416 32 93.8 34 .........T....G................. ACAACCCTTCCACTTCTTGGCCTGGCTGCCAAAC 45482 32 93.8 34 .........T.A.................... ATCGTGTTCGGGGCTGTTAGTTGCTCGAATGGTA 45548 32 96.9 0 ...........G.................... | ========== ====== ====== ====== ================================ ================================== ================== 8 32 96.9 34 GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Left flank : ATTGAACATGGAGAAACAGAGAATTTATATCCAGGGATTAGTAAACAAGGAATAAGAACATTTTACACGAAACATTCTACAGATGTTGAGCAAGAGGTTGCTACTGCGATTCATGTGTACGTTGATGTATTAAAACAAATGAAGCGTGAAGGTGCTGAATTAGCAAGGAAGAAGTAGAACGATGTGATTAGAAGATTTAATAAATAAAATTCTTCATCATATTATAAAACTATACATTCTTGTTTATCAGTTAGCTAATAGCTATGAAAATAAAATTAAATATATTGGTGTAAAAGAATGAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCAAACATAAAATTCCTAGTACATTCGCACCTAGAATTCTCATAATGTATGATGGGGATTTATGATTTTTATACAAAATACTTTACTAGATAAAAATATTTTTATACTCTTGAATAGAATTAACGTATTTGTGGTTGATTTTGAACACAAATCGGT # Right flank : TAGTTTAGTAGATACTCAACTGGAAGTATCTACATCTGCAGTATCTAACAAACATGTAAAAAATATGAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTACTTCTTCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCGGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATT # Questionable array : NO Score: 8.80 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 51834-52128 **** Predicted by CRISPRDetect 2.4 *** >NZ_NVHS01000001.1 Bacillus anthracis strain AFS072084 AFS072084_96_B1_Contig1_140514, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 51834 32 84.4 34 ......T...T.GC.......A.......... TTTATGGTAACTGGTGGTTTAACATATCACATTT 51900 32 93.8 34 .........T.........T............ TTTGATATACCTATTTTATCTATTGTTTGGATAA 51966 32 100.0 35 ................................ AAGAAAAAAGGTCAAACTTTTAGTAATCAAAAAGC 52033 32 87.5 33 ..AA.....T........A............. GGCGATATGCCAGGCATTTGGCAAAGTGTTATT 52098 31 90.6 0 .........T.-..................C. | ========== ====== ====== ====== ================================ =================================== ================== 5 32 91.3 34 GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Left flank : TGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCCCGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAGATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGCATCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCCTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGACGAGCCAAAAACAATCGATGATTATACTGTATTGGTACATGAATTAGATGATTTAAAAGTTGAGATTATTAATGGAATGTAATAAAAAGCGTCAGAATAGTTGAAAGAAAGTATCCTTATAAGGATATACTATATCAATTTATTAAAGGAAA # Right flank : TCTGTTAATTTCTTAACGAGGACTAGGAGCGTAAAATCACATCTCTTGTATGATTGTGATTAAACAAATTGAATTAAGAATACCTTGTGCAAACTTTTAGAATGCTAATAAAATTTTAGAAGTGAATTTTCAGTTTATCAAAGGAGGTCAATAATGAACAATAATTTCATGATAAAAATTAAAAACTTAATATTAAGTAAATCCGAAGGAGAATTTTGGGATTTTAAACAAGAGTGGCATAGAGACAATGAGAGATTATTACACGATATTCTTTGTTTTGCAAATACAGTGCATGAAAAAGACTGCTATATAATAATTGGAGTATCTGATAATGGAGATATAGTTGGGATAAATGATGAAAATAGAAGGGAACAGTCAAGTATACTTGACTTACTTGCTAATACTGTTTTTGCAGGTGATAATACCCCAAGAATTCAAATAGACACAATAAACATAGAACATAAAAAGGTTGATATTCTTACAATATTTAATTCTAATAA # Questionable array : NO Score: 6.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.56, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [7-7] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //