Array 1 171-3903 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOBV01000049.1 Streptomyces rimosus subsp. rimosus strain NRRL WC-3560 contig49.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 171 29 100.0 32 ............................. TCCCCGACCACGCGCACCTGCTCGGTGCCCCA 232 29 100.0 32 ............................. GTCCAGCGGGCGCCGAGCCGGGTGTGCGCGGT 293 29 100.0 32 ............................. TGACCAGCCAAAACGCCGATCCGGTGAGGCGG 354 29 100.0 32 ............................. GTAGATGATGCGCTGGGGGGGCGCGTCGGCGA 415 29 100.0 32 ............................. CCTGCGCGCCACGTGCCCCTCCGTGAGATGTG 476 29 100.0 32 ............................. ATGGTCAGCGCCGGGTACACCATCGACGACCT 537 29 96.6 32 ............................G TGGGTGTTTCCTGCGATCCAGGGCGGCAGCCT 598 29 100.0 32 ............................. AACCCAAGGCAGCTACGCAGCAAGACCTGCGG 659 29 100.0 33 ............................. AGGCCATCCGGCCGCACGCCCGCGAGCTGTTCA 721 29 100.0 32 ............................. TCGCCCCGGGCGTACAGCGGTATACGTCGACC 782 29 100.0 32 ............................. GTGTTGCTGCCGTCGCGTTGCTGTTGTTGTTG 843 29 100.0 32 ............................. TGCAAGACGGCCCCGGCGCCCGCCATCGCGGG 904 29 100.0 32 ............................. GATCTCCTGGGCTTCTGCGGTCACTCGATCGC 965 29 100.0 32 ............................. GTGGGCCGGACCACGTAGGTGTGCAGCCAGGT 1026 29 100.0 32 ............................. CCGCGCAAAGGCGTCACCCACACCGTCGAGGA 1087 29 100.0 32 ............................. TGGGGTGGCTGCTGGATGACGACGACGACGGG 1148 29 100.0 32 ............................. CACGACGGGCTCCCGGTCTGGAAGCCCCCGCG 1209 29 100.0 32 ............................. GCATCGCCGTACAGTGCAAGCGCTACGCACCC 1270 29 100.0 32 ............................. CGGGTTATGAAGGCGACCCGCGCCGACTCGCC 1331 29 100.0 32 ............................. TGAGCCGATACAACCTGACCGCCAGCGATGTA 1392 29 100.0 32 ............................. GTCAGCCACGCCAAGTGGGCACTGTTTGACTG 1453 29 100.0 32 ............................. GTCAGCCACGCCAAGTGGGCACTGTTTGACTG 1514 29 100.0 8 ............................. GTGGCCTC Deletion [1551] 1551 29 100.0 32 ............................. TGGTCAGCGGGTGCTGAGGGGGAGCGGCGTAC 1612 29 100.0 32 ............................. CAGAACGTCCAGAGCGCGGTCGTTGGATCCGC 1673 29 100.0 32 ............................. CCATCGGCCTCCGCGTAGATCAGGCTCTTGTG 1734 29 100.0 32 ............................. GACCGCTCCACGTAGATGCCAGCCGCCTGAAC 1795 29 100.0 32 ............................. GGTCAGGCCGGTGCTGGTGAACTGAGCGGTTG 1856 29 100.0 32 ............................. GGTACATCGCGCGCGCCAGGGAAGCGGACGGC 1917 29 100.0 32 ............................. TCGCCACCGTGCGTCAGATAGACGGCCGCTCG 1978 29 100.0 32 ............................. CTGCATATGCCAACTCTGGTAACTAGGTTGTC 2039 29 100.0 32 ............................. ATGGGCCGAAGCACGGTGGATCTACCGCTCAG 2100 29 100.0 32 ............................. ACCTTGGCCGCCATGGCACGTCAGATGCTCTA 2161 29 100.0 33 ............................. GTGCCCACGGTCAACGGGTACTACATCGCGCAC 2223 29 100.0 32 ............................. GGGCGTGGGAGCCACTGCTGATCCATGGCACC 2284 29 100.0 32 ............................. TGTCCACTCGGTCACTCGGCCACACCAAGGGA 2345 29 100.0 32 ............................. TTGAGGGCGCCCGCGGCGGCCAGCAGGTCGTC 2406 29 100.0 32 ............................. ACGGGCTGGTCACCCCGGAACACGTCTCCGAG 2467 29 100.0 32 ............................. CAGAACCGGCGGCTACGGGACGGAGGGTTGCG 2528 29 100.0 32 ............................. CAGAACCGGCGGCTACGGGACGGAGGGTTGCG 2589 29 100.0 32 ............................. TGGACCCCGGCCGCATTCGACCAGCTCGGCAT 2650 29 100.0 32 ............................. ATGCGCACCGCATCCCTCGTCGGGGCTGCCGA 2711 29 100.0 32 ............................. GCCGCACGGGCGGCATCCGGTTGGCCGACGTC 2772 29 100.0 32 ............................. TCCGCCACACACCACGGAGTTGCAACATAGCT 2833 29 100.0 32 ............................. GGCAGACTCGCCGTGCCCTTGGCGAAGAACCA 2894 29 100.0 32 ............................. CAGCTGCTGGCCGTAGCCCTCGCCGCGCAGGC 2955 29 100.0 32 ............................. GCTCGGCGGCGTGGTCCACGGTGCACCAGGGC 3016 29 96.6 32 .................A........... GATCTCGGCGTGATCGAATGCCAAGACGGGGA 3077 29 100.0 32 ............................. GGACAGGTTCCAGTTCGCCACTGGCCCGCCTT 3138 29 100.0 32 ............................. CTCACCAGCGCCCACGACCGCGTCGTGATCGT 3199 29 96.6 32 ........T.................... CTGGGTTGTCGCGACAACTCTGGTTTCGGTAT 3260 29 93.1 33 ...A............T............ AAAGTCGACGCGGAATTCGCCGCGAACCTGGCG 3322 29 93.1 32 ...A.............A........... ATCGAGAGCATGACGCGCGCCTTCGCCCGGCT 3383 29 100.0 32 ............................. GCTCCCACCTTGCCAAGTGGCTGGCCGCGCAG 3444 29 86.2 33 ..........TC..CA............. CTGCCCGACGATTCCCGCAACGGTGCATCTGGT T [3468] 3507 29 82.8 32 .............A..T.AC..C...... GGTCACACGCTTGACGCACGACCTATGAGACG G [3516] 3569 29 79.3 32 ....A..T.....A.....A...AC.... TGGTGGCAGGGAGCCAGCATTTCCGACGGCGC 3630 29 75.9 32 AC..........G.C......G..AC... TGGGTCTCGTGCTACGCCAAGCGGATAGCGCA 3691 29 100.0 32 ............................. GCTTCACCGACACCCTGCGCCGCGGGCGCCTG 3752 29 96.6 32 ............G................ CGCGCTAAGGAGGCCGCGGTGTCGTACGTGCC 3813 28 89.7 34 ..........G............-.G... CAGCCCCGACGTGTACGCCGCGACCTGGTGGCGC 3875 29 82.8 0 A..........C..C......T..C.... | ========== ====== ====== ====== ============================= ================================== ================== 62 29 97.9 32 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCTCCCGCCTCCCGCCTCCCGCATGAATGGAACAGCCCGCCAATGCCGAAATATATGCCTGTTATGTCGGAATCCCTGGAAGTAAGTAAAAACCCCTCCCTCGCCTGACAAAGCCGCTGGTCACGACCTG # Right flank : CGCACCACCGCCCCGTACACCGGACGCAGGTACCGGCGGCGCGCGGGTGCATATCCGGTGCCCTCGCGAGGCAGCGCACTCCCCACCAGGGAAACAGGAGCATCGGCCGCGGCACAGACCAGCTTCGCAAGGCCACGCTGTCTCGCGGGGCGGTGGAGAAAGTCTGTGGATGCTGTCGTGTGCGCCGCGGGCTGACGTTGCGCAGCGAATGGTCGTTCGACCTGGGTCGTTGAACCCCGGTTAAGCAGCGGTGCAGGGCTGCCTCAGTGTCCTTTAGGTGTCTGCTGGCGGTTTCTTGGCGCTGGTGGCGTGTGCTGTGGCTGTTCTGCTGCTGGTGCCGAGGAGGCTTCTCATGGCCGCAGCCCGACGGACGCGTGATCGGAGATACCGGCGCCTGCCGCTGGATCTGGTGTGCGAGGAGTTCGCCCGCCTGGTCGGCGGGTCCGGCCCGCTGGTGGTGGACGGGACCGTCTTTGCCCACCTGCCCGACCGGGTGCTGG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-39] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //