Array 1 448159-447861 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081906.1 Parabacteroides goldsteinii strain BFG-241 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 448158 32 100.0 35 ................................ GGGATAAACAATGTTACTTGTTGACCCGCAATTTG 448091 32 100.0 34 ................................ GTCGTAAGGGTAAAGGTAGACCAACCGGAAAGAT 448025 32 100.0 34 ................................ TTTGTTCCATCTGTATACATGGTAATCGGCTCCT 447959 32 100.0 35 ................................ ATCTGTTATAGAATTAAGGTCGATACCCGGGAAGT 447892 32 90.6 0 ................A.G.....A....... | ========== ====== ====== ====== ================================ =================================== ================== 5 32 98.1 35 GTCGTATCTTATAGAGGTACGTGGGTTGAAAC # Left flank : TTAGATAATTATCCGGTCTTTTTAATGAAGTGATTTTATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAGAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAGCTATCGGATATCATAGATCATAAAAAAGATAGTATCCGTTTCTATTTCCTGGGAAATAATTATTCTAAAAGGGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGACGAACTTATAATATAACTGTTCGCGAACATTAAGCATTACCCCAAAAGCCGGGGTTTTCGCATTTATTGATTGTTAGTCTATTGCACATATCTATTGGTTCTATTTCATCAATAAAGAATCCAAAAAGTTTATTATCGCATAAAGATATTGGTAACAAACTGTAAATGTTTGTGTTATTTGTAATGCG # Right flank : AAACATTGATCGGGAGTTGATACACGGACATAACCGTCGCACCCGTAAAGGATGCGACGGTAGTGTTATTGTTGCAATTTCAATTCAGACACGTTTCAATCCACGCACTTATTATAACCAACTCAATCTGTAACACCTATCACACCAACAGCAACTCCTCCACCCAAGCGCCATCCAAAACCAACCCGGCATGTTCATCATAACACCTTCCATCCTCCAATATAAATATTCCGGCATACTCTCCCACAGTGCCCTGTTTACGGAACTGTTCGAAATCCCATTTTCTGACGGATACGCTATACTGTTGCAGCTTACGCAATAACCAGAATTCCGGACCAATCCGCTTCAGTTCTTCCAACAAGGTTGCGCCATCACCATAGCCGACTAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAATTGATCGGCCGCCGTAGCAAAAAGGAAATTCATTTCTCCGGCACCTTTATATAAAGAGTCTTTGATCTCTGCCTTA # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTATCTTATAGAGGTACGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 454319-454024 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081906.1 Parabacteroides goldsteinii strain BFG-241 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 454318 32 100.0 35 ................................ ATCAAATAGCATAATTGTCGGTATCTCAGCACGAC 454251 32 100.0 34 ................................ AAATGCAGAAGCAAAAGACAAAGAAGCCAAGGCG 454185 32 100.0 33 ................................ TTTGCCATATTATAATTTTATTGGTAATCCTGC 454120 32 100.0 33 ................................ AACATCTTAGGAGCCAAGATTGATGCTCAGACT 454055 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 5 32 100.0 34 GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Left flank : CATAAACACCATCAAGATGAAAACGCTGATGCCTTCGGCCATGAGCGCATACAACCGTCTGCTCAAAGCCGACTTGGTAGCCATCGATGACATAATGCTCTTCCCGGTGAAAAAAGAGGATGCCGCAGGATTCTTCAATCTGATCAACACGCTTCACGAGAAAGCCTCACTGATAATTACCACGAACAAGGCACCCACCGAATGGGCCAAAACGCTGGATGACGAAGTGCTGGCTTCAGCAATACTGGACAGGCTGTTATATCACTGCGAGGTCATAAAACTCACCGGGCAAAGCTACCGGATGGGAAACCGAAAATCCATTTTTGAAGAGGAAAAAGACACATCTTTGGCTGGGGGTACCCCCAGCCAAAGATGACCGACATTAAAATGTAATCAATAGTATAAACTGATAGTCTCTATTATTAGATGGTGATTTAACTTTACCGAAAAATGACGATTTAAAATTTGCTTATTACATTTAAAGTAATATTGCTGATTGT # Right flank : CTGCAACGAGTACCCTGTACGAACAGTATCTATGTCGCATCCTTTACGGATGCGACACGTTCCTTTTTCAGAGCGTTCAAATCATCATCGTTTCAATCTACTTAGTGAGTTCGTTTCATTACTAAGAATTACTATACTAAGTATAATTATAAACAAAATACAAACGACCACAAAAAGAAAATGTCATTATTCATCAATAGACTGTTCTTATGTCATTTACCTCTACTAAATCAAATTAATTTGCCTTCCATTGTAAATTAAAGCATGAAAGCTTAGTTCATTAAAAAATAAAACATAACTTTGTGAAATAGGAATAACAGAGAAAGTATATTTCTCAAAATGTGGACACCTATATTATTATTCACAATTTGTTAACCTAAACTTATGGTATACACGAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGTTTTACCAGACCTGAAATGAAAGTCGAAAGAGTCAGCTATGATGTGATAACTCCCTCTGCTGC # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 457150-456921 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP081906.1 Parabacteroides goldsteinii strain BFG-241 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 457149 32 100.0 35 ................................ GACAGGTATATGCGAAAGGTTTTGTAGATGGCACC 457082 32 100.0 32 ................................ AATAAAAAAGAAAGTACTATATCTATCGCTTA 457018 32 100.0 34 ................................ AATGTCAACTCATTGAATGTAATCTGATAAGCCT 456952 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 100.0 34 GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Left flank : CTTTCAGGTCACGCTGTCCAAAAGCCTGCGAAGTCATACCACTCGTCCCCATCCGCAAAAAACCAAACAGCCAGTAAATAATATTGAATAGCATCCCTCCTACGGCAATCGCCCCGATATAAGCCGCCGATCCTAAATGACCGACAATAGCGACATCAATCAGTCCCAATAAAGGCACGGTTATATTCGAAACAATAGAAGGTATTGCTAATTGAAGAATTTTTTTGTTCATGTTATTGTATATACCAAAAGCTTATTCTTAAATTTGTAAGCAAAGTTACGGATTACTTTATATATAACATTATAACGCAACAATGTTTCAATAACAGATAAAACGCGAACCCAAAGTGGTTGTAAAAACACAGGATGTTCGCACTCCCTGTTATTCTGATATTTACAATATTATTAATAACTATACAAATACCTATTATTTGTACACTTTATTATTCGCAAAATTATATGCTGAAAATGTTATCAATAAAGCTTTCCATAAACATGGA # Right flank : ATATTATGATTGTTTAAATGTAATCGGTAACTTTGTCTCGTCAAAAATCGGAAAAGTAAAATCGACATGATTCTAAAAAAAATAGCATTGTAATTTTGTGGTGCGAACTACTAATTACAATGCTATGACCGAGACTTCCCAATTAAAGAAGTATCTGATGTGGTACAAAGTTAACGAATTATTTTCAGATGGCCTAAATAAGACACAAATAGGTCAATCCTTAGGTCTTCACCGTCAAACGGTGGCCAAGTATCTGTCCATGACAGAAGAAGAGTTCATTTCCAGCCAGAGCTATGACCGTCATTACGGTCATAAACTTGACGGCTATGAATCTTATGTAGTCAATGAGTTGCGCAAGTGGCCTTTTTTGTCCGCTCCGCAACTCCATGACCGCTTGAAAGAGCATTTTTCGGATCTTCCCTGCGTAACCCCCAAAACGGTCTTCAACTTCGTCAACCGGTTGCGTTTAACGCACCATCTTCCCAAGGAGTTTGAAAAGA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //