Array 1 58276-58765 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAACD010000004.1 Streptococcus pyogenes strain iGAS300 NODE_4_length_144778_cov_41.0351, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=============================	======================================	==================
     58276	    29	 100.0	    36	.............................	GATGTTAAAGATTTAAAAGATATGATGAGAGGAATT  	
     58341	    29	 100.0	    38	.............................	GTGAGGTAAGAGAACTTAAAGATATTATGAGAGGTATT	
     58408	    29	 100.0	    37	.............................	TTAAGCTTGATTATATTATAATCCGTTTTAAAACATT 	
     58474	    29	 100.0	    37	.............................	GCAGATATTGTTACAAGTCAAGTCTATTGATGATATT 	
     58540	    29	 100.0	    36	.............................	TTTATTGACTTTTTAAACTTTTTAGAAGAGTGTATT  	
     58605	    29	 100.0	    36	.............................	TTTAAAAGTTATTTCAGATTTAAAAATCAGATAATT  	
     58670	    29	 100.0	    38	.............................	GAGGATGCAAAATCAAAATTAGATACTAAATTTAAATT	
     58737	    29	 100.0	     0	.............................	|                                     	
==========	======	======	======	=============================	======================================	==================
         8	    29	 100.0	    37	TCAATCCACTCACCCATGAAGGGTGAGAC	                                      	       

# Left flank :   AAGCTCTTAATGGTAATGAGGCCCATCTGATGAATCCCCAAGATAATGACCAAGGCTCCCAGGAAGGACCGAAACCATACCGCATAAAGGATATTTCCCAAAAAACCAGCCCCATAACCTAAAATCACAAAGATAGTGGATAACCCAAAAATGAAGGCTAAGGTCTTGACAATGCCATACCAATAGAGTTTTTTACCAAATATAGTAATCGTCTTTGAATCATCTGCATCCAGTAAAATACCTAAATAAACAGGAAGGACCGGAAAGATACACGGAGAGAAAAAGGATAACAAGCCTGCCCCAAAAACCGATACCATTAATACAAGTGATAGTGTCATAAATAACTCCTCTCTTAAGTTACCCTTAGTTTACCGAAAGCTAGTGGCGCAAACCATAGACTAGAACATGCAAAAACTTGAATTTGATACGCTATCAGATAAATGGTTGACTAAAGGCATGTAAAAACCCGACCTCATTAAAAGAGAGGTCGGATTCATCTT
# Right flank :  CTGCGCCAAATGACACAGTTTATAGAGAAACGGATGGCACACATAGAGGTGTTTTAAGCCTTTTTATCTCCATTTCGCTTCTTTTTTAAGTTATTTTTGCGCGAGCAAGCAAGGTTTTTCTGTGAAAGCTAGCTTCGCACAAGAGATTTTTACAATAATAAGACACCTTTATCTGGGTCATAGCTGTCTGAGCGACCAAGTGTTTCCACACGCCTCTGCCAATTTTTCCCCAATAAATAAAAGCGAATACTATCAGTTTTCTCATCAATGATTTGTGTTAAGCGGTGCTTTATATCCACAAATTCTGCGGGTGTCACAGAACATTCAAAAACAGAATTTTGAACACGTTGCCCATAGTCCACACAGAGTTTGGCAACATGACGCAATCTTTTTCTACCAGCAGGTGTTTCCGTATTTACATCATAAGTGACTAAAACCATCATATAACATCTCCTAAACCATAAAAGGTGGATAGCTTTCTAAATCTCCTCGTATGGCCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCAATCCACTCACCCATGAAGGGTGAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [9,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//