Array 1 13376-14161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000011.1 Methanococcus voltae strain DSM 14649 Ga0466840_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 13376 37 100.0 38 ..................................... AAACTAATTTAGAAACTGGTAATGGTTATTATTTGAAT 13451 37 100.0 42 ..................................... TTTGATCTGTCGCATGATTCAAACAATGCTTTTAGTATTGTT 13530 37 100.0 36 ..................................... GCAACTACCAAATCTCTAAGATCTAACCATTGTTTC 13603 37 100.0 40 ..................................... ACCATCTCAAACACCTTACTTCAATCTAATCCTGTGCGTC 13680 37 100.0 36 ..................................... GTATATTCTGCATCTTTAATCCCTTTTATCATTGGT 13753 37 100.0 37 ..................................... AAGTATATCAAAGCATTTTCTATGACAATTTTTGTCA 13827 37 100.0 40 ..................................... CTACTTGCTCCGTTCCTGATTTCATCAGTTCGCTTATATC 13904 37 100.0 37 ..................................... ACCTTTTTCAATTACTAATTTATAGTAAGCCCATATT 13978 37 100.0 35 ..................................... AGTTATCATAGGGACATATACCTTTCTCTTTTGCT 14050 37 100.0 38 ..................................... CCATATACTCGAGCCCTTGCGTCCTCAGTCCCTGCATT 14125 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 11 37 100.0 38 GTCACAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Left flank : AAAATATCCCGAATCATTTGTATCATATTATTATATTTTTAAATTTTAAAATAAATATGTTAATATTATACTCCACCAATTTGTAATATATTTTAGGTAATAATAGTAATACTTAGTATGATTTTTACGTGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCTCATTTTGAGCTCCTTTTTTTAGGGTTGAAAAATTTAGAGCTTATTGTGGGTAGTATATACCCCATATCAGTTCCCAAGTGCTAGGTTCATTTTCTATCGTTTAATTATTGGTTATTAGTTACTTTTTAAACGTTAAAAGAGTTACTTTTTACTTATTCAACTAACCCCGAATTATATTTTTAAAATACAAATGGTAACTTTTATATAGGGTTCAAAACAAACTATATATTGTCAGATTGAATAAATTTTGTGATAAGGTTAACTAGAGCTTTATTTTATCATTAAGTCTTATTTTGTACTTATTGCCAAGTAATAATTTAGTTTGGT # Right flank : CCATATACTCGAGCCCTTGCGTCCTCAGTCCCTGCATTGTCACAGTGGCAATTCCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 59211-58057 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000004.1 Methanococcus voltae strain DSM 14649 Ga0466840_04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================= ================== 59210 37 100.0 36 ..................................... CTATATTATATAGTATACGGGTAGCATTAACATCTA 59137 37 100.0 41 ..................................... TCCGATCAGCAAGGATTAGGTAAGACTAAGCAAGTTATTGA 59059 37 100.0 35 ..................................... AAATTGATCATACTGTATTAAATAAATTATTAACA 58987 37 100.0 36 ..................................... TTGATATCGAAAGCGTTATTATTTGATATAGTAGCT 58914 37 100.0 37 ..................................... CAGAACTACATTGTACCGATGAGGCAGATACTTATTT 58840 37 100.0 35 ..................................... TTGAACAAATTGTAGGTCTTGCAAACATTAAAGAA 58768 37 100.0 38 ..................................... TGATATGTTCAAAGAAGAGGAGCATACATTTAAAGAAA 58693 37 100.0 34 ..................................... TTCCGGAAATTGCTTGAAGTTCCATGAGCGTAAA 58622 37 100.0 37 ..................................... TTCAAGCCCTACACAAAAATGACCAAACTAGTCGAGG 58548 37 100.0 49 ..................................... TCCATATTACCCCCCTATTTAAACATTTTAGTGTATAATCTATCGACTA 58462 37 100.0 35 ..................................... TACATTTGTCAGGTACGTCAATATCCCATATAAAT 58390 37 100.0 34 ..................................... AAGCTAAAGCACTTGAACCATATTTATCTCCTAT 58319 37 100.0 41 ..................................... ACAACTACACTTGGCATTTATTACACCGTTTTATAAAATAT 58241 37 100.0 36 ..................................... ATACTTTCACTATTATCAAAATTTTCAAATGTTACT 58168 37 100.0 38 ..................................... CAATGTGGGCAATGTAGTTGATATATCATTTTTTCACC 58093 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ================================================= ================== 16 37 99.8 38 GTCACAGTGCATGATCCATTAAAACAAGGATTGAAAC # Left flank : AAAAAATAGATTAATATCATATATGGGGCAATATATCTATAAAAGAAAAATACATTTTAGTCCTATAACTAAAAGGGTATTTTTAGACAGTTTTATAACATTATAGTAATACTTAGTATGATTTTTAGATGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCCCATTCTGAGCTCCTTTTTTTAGGGTTATAAAATTTGGAGTTCTTTATAAGCTTTGTTTAATCTATGGTGTTATTCATGTGCTCAATTAATTCTATATCCTTTGATTATCAATTAGTAATTACTTTCTGTTTATTAAATGAGTTACTTTTTACTTATTCAACTAACCCCGAATTATATTTTTAAAATACAAATGATAACTTTTATATAGGGCCTAAAACAAACTATATATTGTCAGATTGAATAAATTTTGTGATACGGTTAAATAAAGCTTTGTTTTATCCATAAGCTGTTTTAAATGCTTATTGATGAGTAATAATTTAGTTTGGT # Right flank : CCCAACTGCCTTAGGACGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGACAACTTACATTGTCGATGGGCGAACGGCTTCATGTCAAATCGGAGATTTGATATTTTAATTACATTTCGAGTCCATCATCTTAAAAACCTACGGTTTTTAAAATACCTAAAATCTATGATTTTAGTATAAAGGATTTTTACGAGTGTAACGAGTAAAAAGGGTTTGTTTTATGAACGAAGTGAATAAAAGGGTTTGGTATAATCCATTGAAACAAGGATAATTAAAAAAAGCAAAAAAAGGTATTAGCAAATATATTTTTTAATCTCTTCAGGAGTTCCATACTTCTCAATCATCTCGTATTGGATACTTTTAAGGATTAAATCTTGCTCTGTTAAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTGCATGATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 1 5282-6183 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000002.1 Methanococcus voltae strain DSM 14649 Ga0466840_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================================================================================================================== ================== 5282 37 100.0 36 ..................................... CCCGTAGGTCCTATCCAGTAGGGTCTTGGTTGGGGA 5355 37 100.0 37 ..................................... TATATTGAGTATCCCCCACAGTAGTTGTAGATGTAAT 5429 37 100.0 36 ..................................... TATTAAAATCAAATCTCATATTTGAAATGGGGGTAG 5502 37 100.0 37 ..................................... AATTTGCAGTTATGTGGTATCCTTTTGCTAAGTTTTG 5576 37 100.0 36 ..................................... TCCTCGCTCCATCCTTGTACTAATACTGTTGCTATT 5649 37 100.0 39 ..................................... GCAGCTGCTACACTTGTTGCCCATCAATTCCTACAGGCT 5725 37 100.0 38 ..................................... AACAGTGAGGATTTGGCTTATTCCAGAATGTTAATTGA 5800 37 97.3 149 ....................................G CCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGCCAACTACGTTGTCGATGGGCGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAA 5986 37 78.4 45 AAG.GTT...T..A....................... TATATATTGCCATATTATAGCCTCGATAGTTAATTTTAGACTCGT T,T [5991,6017] 6070 37 100.0 40 ..................................... TTTATTGCGTTGCTATCGTACGTTTTAAGCATTGAATTAT 6147 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ===================================================================================================================================================== ================== 11 37 97.5 49 GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Left flank : TATAATGATATATTTATTAATTGAAATATATAATCTTTATTAATTTTTTTAATATATGCGATGAGGATATTGTTTATTTTCAAAATAAAAGTTGAAATTACCTGGGTAATACTTAGTATGATTTTTACGTGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCTCATTTTGAGCTCCTTTTTTTAGGGTTGAAAAATTTATAGGTTAATGTTAGCTTTATCTAACCCATATAACTACTAATATAGTTGGTTCATTTTCTATCGTTTGATTATTGGTTATTAGTTACTTTTTAAACGTTAAAAGAGTTACTTTTTACTTATTCAACTAACCCCAAATTATATTTTTAAAATACAAATGGTAACTTTTATATAGGGTTCAAAACAAACTATATATTGTCAGATTGAATAAATTTTGTGATACGGTTAACTAGAGCTTTATTTTATCATTAAGTCTTATTTTGTACTTATTGCCGAGTAATAATTTAGTTTGGT # Right flank : GCCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGCCAACTACGTTGTCGATGGACGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGCCAACTACGTTGTCGATGGACGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTACATTTCAAGTCCATCATCTTAAAAAACTAAAAATCAAAAATAATAATTAACAAAATTTTTCAAATTTAAATGGAATTTCAGAACTTAAACATAATACATAAAATGTCATAAGTTGGATTAAATACGTATATTCAACTTCATTTATTACTTTTAAAGAAAAGCAACTTTCATATAATTGATTCAATACTTTTTTATAGTTTAACTCTTCATTAGTTGTGGATTCGCCGATTA # Questionable array : NO Score: 5.02 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:-1.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Alternate repeat : GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 33439-31677 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000002.1 Methanococcus voltae strain DSM 14649 Ga0466840_02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 33438 37 100.0 35 ..................................... GTCTATTACATGATTCAAACAATGCTTTTAGTATT 33366 37 100.0 39 ..................................... ATATGGGTGTGGGGTATGGATATTCTCCAATGATGACAT 33290 37 100.0 36 ..................................... ACGGGATGGTGGGGCAATTAGATGTTAATGCTACCC 33217 37 100.0 37 ..................................... ATAAGTTAGGCCGGTCAGTATCTAACAATTGGATATA 33143 37 100.0 35 ..................................... ATTAGTTTGCAACAAATTTAAGAGTTAATTTAAGT 33071 37 100.0 38 ..................................... ACCAATTGGTCGCAAGTTCGAATCTTGCCCTGTCCGCT 32996 37 100.0 38 ..................................... GCTATTAATTCCACGTAAGGGCATAGCTTGTGGTTTGA 32921 37 100.0 45 ..................................... CGTCCTCAGCATAATATAATCTTGATTTGTCCGCTGTTGCTGGAT 32839 37 100.0 41 ..................................... TCGCCCCCGCTCCAACAATTGCCCCCGATATCATTTCCTTA 32761 37 100.0 37 ..................................... AAAACCTCCAAATTATGCGAATGTGTCCGCTCCTGCT 32687 37 100.0 37 ..................................... AAAAACTGTAAATTATGGGATCATAGATTAGATGAGA 32613 37 100.0 37 ..................................... TCTCCATTGTGTTATTAGTTCCCTTATTTGCTGATTG 32539 37 100.0 36 ..................................... TCTCACACCTCCTGCATTAATGCCCCTTATAGTCAA 32466 37 100.0 37 ..................................... AAACTACCGAACAAGTTCAATTGCTAACCACTACTAT 32392 37 100.0 37 ..................................... CCTCCAAAAAATAAATAATTGATAATTTAATTTTCAA 32318 37 100.0 37 ..................................... TTATTTTCTCTAACTCTATTAATTGTTTGTATTAAAA 32244 37 100.0 43 ..................................... TAGTATATAATTGTATTCATAGCAAATCTAAAGTGATTATAGG 32164 37 100.0 33 ..................................... CAATCTCAGGAATTGGATATTTCATTATCATTG 32094 37 100.0 44 ..................................... TAGTATTCCGTATTGTCAATTAAATCTTTTTCCAAATGTCCAAA 32013 37 100.0 40 ..................................... CAGGAGATATTATGAAATATGAATATCTACCAATGGAGGT 31936 37 100.0 37 ..................................... AGCATCAAAAATTAATAAAAAGCCTAAAAATTGCAGT 31862 37 100.0 39 ..................................... CTCTACAATTAAAAAAGCTATATTACTGCAACAATTAAA 31786 37 100.0 36 ..................................... ATATTACTGCAAAAGGTAATTTTATATTATGGGTTG 31713 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ============================================= ================== 24 37 99.9 38 GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Left flank : TAATTCATACTTGGAAGTTTTAAAAGGCATATATCCCGAAGCTACCAAATACGAGCTTAGATGCTTAGATTGTTGTTATAAAAACATATGTCCAAGGTAATAATAGTAATACTTAGTATGATTTTTACGTGACCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCTCATTTTGAGCTCCTTTTTTTAGGGTTGAAAAATTTATAGGTTAATGTGAGCTTTATCTAATCTATATAACTACTAATATAGTTGGTTCATTTTCTATCGTTTGATTATTGGTTATTAGTTACTTTTTAAACGTTAAAAGAGTTACTTTTTACTTATTCAACTAACCCCGAATTATATTTTTAAAATACAAATGGTAACTTTTATATAGGGTTCAAAACAAACTATATATTGTCAGATTGAATAAATTTTGTGATACGGTTAACTAGAGCTTTATTTTATCATTAAGTCTTATTTTGTACTTATTGCCGAGTAATAATTTAGTTTGGT # Right flank : CCCAACTGCCTTAGGGCGGACGGCTCCATGTCAAATCGGAGATTTGATGTTTTTATTTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTAGGGCGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTTTATTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAAAAGGGTATGTTTTATGAACGAAGTGAATAAAAAGGGTTTCGAAGAGAGTGAAAAAGTCATAAGGTCATTATATCGGTTAAATGAATTTATGAAATATATATTTCCAGAGTCTTTTGATAGGGATTTTGTAGAACCGACTCATATTTACAATTGGGGCAATATTCTGCAAAATAATAAAAAAACTGCGATGATGGCACCACGTGGTCATTTAAAGAGTTACCATATTTACGCATACGTAATGTGGAGAATTTTCCGAGCAAGGGAGTTTGGAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 53392-54977 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000002.1 Methanococcus voltae strain DSM 14649 Ga0466840_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================== ================== 53392 37 100.0 36 ..................................... AAAAAACAGTTCAAAATATATATAATAATAAATAAG 53465 37 100.0 37 ..................................... AAGATGCTGATGTTAATATATTATTATTACTATCTAC 53539 37 100.0 41 ..................................... ATGCAGAATTGTAATTTTTGCAGTGCTGGAAATATACTTTT 53617 37 100.0 39 ..................................... TACCAATATGTTATTGTATATTGACTTATATCTTGTAAT 53693 37 100.0 36 ..................................... AAGAAACATCGCCTGACGAACGTAGGGCACTTACTG 53766 37 100.0 36 ..................................... TTCCATACTGAACATGAAGCTTCATCTATTTGCATC 53839 37 100.0 40 ..................................... CTGCTGGTTTTGTGCAATTTGGAGTTGATTCTAAGTCTTC 53916 37 100.0 37 ..................................... TTAACCTTGCTTTTGCTTTGCTCTTTGATAGCTATTT 53990 37 100.0 36 ..................................... CGATTTCTTTCGGAAATTCAACAATAATTTTATTAT 54063 37 100.0 39 ..................................... TTAAATCTGGGGCTGGTTGCGGTGCTGGTGGTTTTGCAC 54139 37 100.0 33 ..................................... AAACGTACAATACGGTATTTATGGACATGTCAT 54209 37 100.0 39 ..................................... TATATTATATGCGTATCACCATTAGATAATAACTCATCA 54285 37 100.0 38 ..................................... TCTAGTCCTTTAAGCCAATTTACCCCTTGTATTACAGA 54360 37 100.0 33 ..................................... CGGTCTAATGAAACTGATGTTGCAGTAGAAACA 54430 37 100.0 35 ..................................... TCCCTTTTGACTAATTAGTCATCCGACATTATTGT 54502 37 100.0 34 ..................................... GTATTGTTCACTATAGTACTTACAAATCTGAGAA 54573 37 100.0 41 ..................................... CCATATTTTTGCCATAATTTTCCTTGCATTGTAAAGTCTGA 54651 37 100.0 38 ..................................... ATATAGAAAGATTAGTTACCAAAGTAACTGAAAACTAT 54726 37 97.3 104 ....................................G CCCAACTGCCTCTGGGCGATTGGCATTTACTCAAATCGAAGATTTGATATTTTTATTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTAAAACGAGTAAA 54867 37 78.4 36 AAG.GTT...G.........................G TCATGAATATAATTATTAATTTTTTCAATTTCATTT T [54872] 54941 37 97.3 0 ...A................................. | ========== ====== ====== ====== ===================================== ======================================================================================================== ================== 21 37 98.7 40 GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Left flank : AATTGACATATAATAGTTATAATATTTATTTAACAAGATATAAAAATAATCCCCTAAAATTAGCAAATTTGATATATATTTAGTTCACCATTATCCATCAATTTAGTAATACTTAGTATGATTTTTACGTGATCTTTGTAATAACGCATTTCAAAATCCAAAATTATTAAGCTCATTTTGAGCTCCTTTTTTTAGGGTTGAAAAATTTATAGGTTTATGTGAGCTTTATCTAATCTATATCACTACTAATATAGTTGGTTCATTTTCTATCGTTTGATTATTGGTTATTAGTTACTTTTTAAACGTTAAAAGAGTTACTTTTTACTTATTCAACTAACCCCGAATTATATTTTTAAAATACAAATGGTAACTTTTATATAGGGTTCAAAACAAACTATATATTGTCAGATTGAATAAATTTTGTGATACGGTTAACTAGAGCTTTATTTTATCATTAAGTCTTATTTTGTACTTATTGCCGAGTAATAATTTAGTTTGGT # Right flank : CTGGGAAATATGACCCATAGTTCCATAGATGATAACGGATATCAATTAAAATCACCGTAAAAACTTGGAAAATAGCTATTTTTAGTAATAATTTATTTAACGGTTGAATTCCTTATTTTTTGAAATAAACGTCAATTCGTGCTTATTTTTTTAGACCTTATTTGATGATATAGAGAATAATTTAAACTTATTTTGTATGAAATAATCATTTATTGTTGATATTCATTTTATGCTTCTTTTGAGTTGTGCGTGCTTTTTTTGAGATTTAAACCGAAAGTTTTAGATATTAGTCCTGCGCATATTATATTGTACAGTACACTATACGGTACATTAATATCAAACATAATAAAATAATGTGGGGTTGAGTAAATGGCATACATCGGTTATGTAGAAATTAAATTTAGAAACAAAGATAAAAAGACCGGAAAATATGAAGAATGGGAAAATATAGCACCATTGCGGATATATGTAAATTTCGAAGATTATGAAGACTTAAAAAT # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:-0.28, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 59-241 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGMO010000009.1 Methanococcus voltae strain DSM 14649 Ga0466840_09, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 59 37 100.0 36 ..................................... TAGTCAATGCCTGTATTTCCACCATTAAGCACACCA 132 37 100.0 36 ..................................... ACTTTGAATTCTTGTTCATTGATATATATAATTTCA 205 37 94.6 0 ...G................................G | ========== ====== ====== ====== ===================================== ==================================== ================== 3 37 98.2 36 GTCACAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Left flank : ATTAAAACAAGGATTGAAACCCATATACTCGAGCCCTTGCGTCCTCAGTCCCTGCATTG # Right flank : GCCCAACTGCCTCTGGGCGATTGGCATTTACTCAAATCGGAGATTTGATATTTTTTTACATTTCAAGTCCATCAAAGGATTTTATGAACGAAGTGAATAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGCCAACTACGTTGTCGATGGGCGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTATTTTCTTATTAAATTCCCATCAAAGGATTTTTACGAGTGAAACGAGTAAAAAGGGTTTGGGATATTCCATTAAAACAAGGATTGAAAGCCCAACTGCCTTAGGGCGGACGGCTTCATGTCAAATCGGAGATTTGATATTTTTTTACATTTCAAGTCCATCAAAGGATTTTATGAACGAAGTGAATAAAAGGGTTTGGTTGAAAGCCCAACTGCCTTTAAATAAATCTTTCAGATTTATAGCTCGCCAACTACGTTGTCGATGGGCGGACGGCTTCATGTCAAAT # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGTGGCAATTCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.50,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //