Array 1 23639-25198 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHHS01000035.1 Brevibacillus gelatini strain DSM 100115 contig_35, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 23639 36 100.0 37 .................................... CGTGAGGATGCCGAAATATCACGCGCTGAACGTGCTT 23712 36 100.0 37 .................................... GCCAACCACGCCAGCCTTCCGCAATCGGGCGAGCGCC 23785 36 100.0 37 .................................... GAGGCGTTTTTGGCGGAGCTGAACGACCTCATTCCGG 23858 36 100.0 38 .................................... GCATCCACTGGAGCCTTCGTAGCAGTCAGGAAACCTTC 23932 36 100.0 35 .................................... ATGGTAGCCTCCAACTCTTCAGCGCTCGTCAGAAC 24003 36 100.0 35 .................................... GTGTTGCAGTAGTAATAGTTCCGCCACGGCTTCGA 24074 36 100.0 35 .................................... CATTGACTTTACTTCGACTTCGCGCGATGAGAATG 24145 36 100.0 38 .................................... CATTGACTTTACTTCGACTTCGCGCGATGAGAATGTTT 24219 36 100.0 41 .................................... CCAGGATGAGAAAACAGGTAAGCAGATCGCAGGTGCAAAGT 24296 36 100.0 37 .................................... CAAAGCCTGTGGATAAAGTATCAGTCGAGATCAACGG 24369 36 100.0 36 .................................... CACAGCCGCTTGATGATCGCACTCGCCGTCATCTTC 24441 36 100.0 36 .................................... CAAGCAAAACCTTGAAGCATATAAGGTACAAGCTTT 24513 36 100.0 34 .................................... TTGATTCGTTCGAGATCCCCTTCCACTAACTCTC 24583 36 100.0 39 .................................... AGCTTTTTACATTGAGGTACGAAGCAATTTCGGACGAAG 24658 36 100.0 36 .................................... ACACTAAAGCGGCAGATTTAATAGCTATCCAATTTC 24730 36 100.0 37 .................................... AGAGCAGGGTAGGATAGTATCGTGTCGTGTCGTAATA 24803 36 100.0 35 .................................... GGCGTGCTGCGTCCTGCCGGCTTCGTAGGTTAATC 24874 36 100.0 35 .................................... TTGCAGCAGCCTGCGGTAGTTTCGCCATCGCCCGA 24945 36 100.0 35 .................................... AGGACTTGAGACGTCAATTAAGTATGTTGGACTCA 25016 36 100.0 38 .................................... TACACGGTCGGGAAGGAGAAGGAAGCGCAGGACTTGTT 25090 36 100.0 37 .................................... AGTTGTTTTCGTTGTCAACGCACTTGCTCCATCTCTC 25163 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 22 36 100.0 37 GTTCGAAGGATTAGTGGAAAGTATCGTGATTAGCAC # Left flank : AAGCCTGGCTGAGCTGATTCACCATGGAGAAGACCAGGTCATGTTTGTAAAAATTGGTCCTGTGACGAGAGAGAAGCTGGACAAACGGATTTCTACGGTCGGAAGGGAGTTTCTGCCTCGTGATTTGACCAAATTTATCTATTAGGGAACGAGGAAATTCTGTTGTAACAAAAGTGGAAAAGGAGTAAAATAAAGGTGTGAGTCGCACGCTATAGGCTATAAGTCGACTTACATATCCGTGCGTGTGCATTATGGCCTTATCCACAGTGGCTATACCCACGGATAATCACGACTTTCCACTAAACCTTCGAACTTCATTACGCGAGCATCCTCTCAGACCAAAAAAGCTGGGGGATGCTCGAACTCTTTGTGGGAGTAGGGGTTTCTGAGCTTTGTCATCGAAAATACATTCTGTGGAAAAGAGGAATGGCGCATGAAATATGACATGCTCGAAAAACGGTTCTTCAGGGCTTGTGGTTGTAGGGGTTGAAAGGCAAGGA # Right flank : TCGACCTGTTAAACGAGACGTACCCGGACCTCGCCGTTCGAAGGATTAGCGAAAAGATTCCGAGAGCGTAAAAAGTTTTGTGTAAATGGTTAAACTTCCCATTAAGGAGATGATCATTTATGCATGACAAAAGAGACATGACGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAAGGATTAGTGGAAAGTATCGTGATTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 48786-50028 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHHS01000006.1 Brevibacillus gelatini strain DSM 100115 contig_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 48786 32 100.0 35 ................................ TTCATCGGCCTGTTGTCGATATTGACGAACACGTG 48853 32 100.0 34 ................................ ATCGACGAGACGAGCACGCGGTCGCCCGCCTTTA 48919 32 100.0 37 ................................ TACGAGGTCGACGCCCGTGTGAAACGCAGGCGCTCCC 48988 32 100.0 37 ................................ ACGATGGCGAAAAGGTCAAGGTCGAACAGGGCCTCGT 49057 32 100.0 35 ................................ TTGCGGAACTCCTGGACCGCGCGGACACCGAACAC 49124 32 100.0 34 ................................ CTTATTGGGAATACGACAACATCCAAGCGCACCT 49190 32 100.0 36 ................................ TTGCGGATTTCCTGAGCCACGCGGACACCGAACACG 49258 32 100.0 36 ................................ GCGAGCGCGGATACGGGCACCTTGTGCTCGAACGTC 49326 32 100.0 34 ................................ CACGTATAATATCGCAGGTACCGCGTCCGACCCC 49392 32 100.0 34 ................................ TGCTGCAATCCGCTTGTCGCGCTCCTCCTTGAGT 49458 32 100.0 35 ................................ TGCCGCTCCATGAAACCGTGAGCTGCCTTTTCGAT 49525 32 100.0 35 ................................ TTCGGCTATCCTACGGGCATTGTCGCTGGTTGCTC 49592 32 100.0 36 ................................ AGCATGAGTCAGGTCAAGACTATCCAAAAAGTCGTC 49660 32 100.0 35 ................................ GTAGTCGCCTTGGAACTTGTCAGCAGGCAACTGTT 49727 32 100.0 36 ................................ AACATCACCTTGGACGGAAGAGAGTATGGCGTACTT 49795 32 100.0 33 ................................ ATCCAGGACACTAGCACAGCTAAGGAGTTGGCG 49860 32 100.0 37 ................................ GTCACTCCAGTTGCGGCGCGACAACTCCACGATAATA 49929 32 100.0 36 ................................ GACCAGTGGTACGATCTTGGCTTTTCCTTGTTTGGG 49997 32 93.8 0 ...................T.C.......... | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 99.7 35 GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Left flank : TTGGATGAGTATCCTCCCTTTTTGTGGAAGTAGGTGAATGGTTTGCTGGTATTGATTACGTATGATGTGAGTACAGCCAGCAGTGCAGGGCAAAAAAGACTTCGCCGTGTCGCGAAAATATGCCAAAACTACGGTCAACGTGTCCAACATTCCGTGTTTGAATGCATTGTGGATTCCACGCAGCTTACTTCATTGAAGCTAGAATTGCTCTCGATCATCGATCAAGATCAGGATAGCCTCCGTATTTATCAACTAGGCAATCATTATAAAAATAAGGTAGAGCATTTGGGGGTGAAAGAATCAATTGACTTAGAGGGACCACTGATTTTCTAGTGCGAATGTGTAGCGCACACGAATTCCCAAGGAGATTCGCACCTGAAAAACGCGCCGAAATGCCAGATTTTTGTCTGTTTTCTCTAGTTATCTTAACGCATGAATGAATTTAGGCGTATTTTTATTACAAATATAAAACGAAAGTATATTTGAAGTGAAAATTCGCT # Right flank : TAACGTCAGGAGCGGAAAACGCGGGATTGTACGACACAAAAAGGCGATTAGCGAACCGACCATGCAGTGCTGTCGAGGGCGTAGATCACCGTGCCAAGCATCTACGACTTGGCATATAATGCTCCCCCTGCAAAAGCAGAGCGTTTCTACCATATGTTCGCATTCCCCCAAAAGACCGCACCGCTCCCCTCACTACGGCAGGGGGAGCCCCGATCATCTATCTGACCTATCATAACCCAAAGGAACGAGAAACTAAAACAAGTCGCCAGGTCGTGGTGTACAAGCTTGTTTCTCCGGCTACAATTATGAATAAACAGCGCAGTCCAACATTGGTAAATCCACCTAATTCGAACCCCAATTCTGATAAGAGGTGAGCAAATGTTCGGATACTTCATCACATTTGCCCTGAACTTTATTGTGGCTTGCTTTATTTACGACGATCCCAGCGTCCTGAAGCCTTTCGTGCACTCCCTTTTGATTCTGGCTTTCATCATCCTTGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTACGCGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.00,-9.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //