Array 1 993060-990103 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062137.1 Actinobacillus sp. GY-402 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 993059 32 100.0 34 ................................ CGGCTGCTTGCCGAGTACGCCAGCGACGAGGCAG 992993 32 100.0 34 ................................ TCGCCATCCTGCGGGAGCGCGAGGTAGCCGGCGT 992927 32 100.0 35 ................................ TGAGCGATCGGATACATAAGTCATCTGCCGCCCGC 992860 32 100.0 33 ................................ AGGCCAAACTTGCCTCTCAAACCCAAAAAAACA 992795 32 100.0 34 ................................ ATTTTGGCGGCGGGCGCATTATGCCTGGGTTGTG 992729 32 100.0 34 ................................ TTGTCGTCTTGGTATTTTTGGATTCGGGCGGCAT 992663 32 100.0 34 ................................ TAAATGTCCCGGATTTATACACACCTTTCCGGCG 992597 32 100.0 34 ................................ TCTTTGTAGTACCAATTTATTAGGACCGTAGCCA 992531 32 100.0 36 ................................ ATGTAACAAGATGATTTTAAACGATTTTTCGGGGTG 992463 32 100.0 35 ................................ TAAAGATTTGCCATTTGGACGATAGGGCCGTCATG 992396 32 93.8 35 ..........GA.................... GTCTCGTTTATCGTCACACTACCGTGAAATACCTG 992329 32 100.0 35 ................................ TGTCACAAAATATCGACTACAAAGTTGAAGAGTAC 992262 32 100.0 35 ................................ TGTTAAGGATTTAAAAAGACGATCGCGCAACATAC 992195 32 100.0 34 ................................ GCTATTCTTCGCCGTTTTTTCTGTCTAAATTAAT 992129 32 100.0 35 ................................ CTTGTGATCAGGCGGACGCGGAGACTCGGGCGAAC 992062 32 100.0 34 ................................ ACGCCATGTGCCAAGACGTGGCGAACCAAGCGGA 991996 32 100.0 33 ................................ CATTTGCCGCAATTTTTATAATTGCCGGCGGTT 991931 32 100.0 35 ................................ GGGCGCTATGCTCGCAGATTAAAGGATTGCGGCAG 991864 32 100.0 34 ................................ TTGACGTCATCAAAAAACATTAGTAGAAGTAGAT 991798 32 100.0 36 ................................ GTATTTAGGCAAATGGTCTAATTTGTAATAAGCTTG 991730 32 100.0 35 ................................ TTTTTAATCTGCAACACGTTGCAAGCGGTCAATAG 991663 32 100.0 34 ................................ AATTTTGTTACAGCCCCTACTAAAGCCGTGTCAT 991597 32 100.0 34 ................................ GCCAAATTAAAACCGGAGAGTTTTTACGTTGCAG 991531 32 100.0 34 ................................ AATCAATCGCTTGCAGCAACTTTAGTTTTATGCG 991465 32 100.0 34 ................................ ATGTCATCCAAGAACCGTCTGTCAAAGCAGTTTG 991399 32 100.0 33 ................................ CACTTTACCATCATGCTCGTATGTTTTGCCAAC 991334 32 100.0 36 ................................ CCCATCATAGATGGTCAGGGTTGCGGTACTTGCCGT 991266 32 100.0 33 ................................ ATACCTACTCCTTTTTTCAGATTGGCGGTTAAT 991201 32 100.0 34 ................................ ATACCTACTCCTTTTTTTCAGATTGGCGGTTAAT 991135 32 100.0 34 ................................ TTTTTAATTTTTTTGTGTTTTTATTCTGTTTTGT 991069 32 100.0 33 ................................ CGGCATACCTTATCAACCACGCGCACATATTCG 991004 32 100.0 34 ................................ TGTTTGTAAAGTAGTATTATTCATAACTGAATTT 990938 32 100.0 35 ................................ ACGCACAGTTTCCGGGGCGTAGCGGGCTCTTGCGA 990871 32 100.0 34 ................................ TGGTATCGAGGCCGCAACATGCGCTTGGCATGGC 990805 32 100.0 34 ................................ TAGAAAAGGTGGCAAGCGGCGCAATCTCGCTCGG 990739 32 100.0 35 ................................ AGGGCGGTTTTTTTAAAAAAAAATCAAGTTATTAA 990672 32 100.0 34 ................................ GATATCCGCGTAAAACGCACTGATTCGATTTTCT 990606 32 100.0 35 ................................ GCGGAGGAAATTATGTAGTAATCAAATAACAAAAG 990539 32 96.9 35 ............G................... ATCGAGGGCGCAATAGCGTTTTTTGCCCTGGGTAG 990472 32 96.9 37 ............G................... GACGGATGTTACTGTTGAGGTTTGACTATATCCGCCG 990403 32 96.9 36 ............G................... ATTATGGGTGGATCCGGATGAATTAATCGAAAAAGC 990335 32 93.8 35 ...A........G................... GGGTTAGTTGATAGTCAAGAAGAAGCAGAAACTAT 990268 32 96.9 34 ............G................... GATCTGAAATTGGTTAAAGAAGTTAAAGATAAAT 990202 32 93.8 37 ............G..............A.... CAGGTGTCCTCTTTGCCAGGCGTCCACTCTTGTTTAC 990133 31 75.0 0 ..................T.A.AA.G.-..GT | ========== ====== ====== ====== ================================ ===================================== ================== 45 32 98.8 35 GCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Left flank : TTGGAGTGGATCATTTATGATGATGTTAATTACCTATGATGTCTCTTTTGAAACGGATGGCGGCGAGGGCAGGTTACGGCGAATTGCAAAACATTGCCTGGATTATGGCGTTCGCGCGCAATATTCCGTGTTTGAATGCGATGTAACGCCCGATCAATGGGTGGTTTTAAAGGCGAAACTTCTCAATACTTATGATCCTAAATGTGATAGTTTGCGGTTTTATCATTTGGGCAGCAAATGGCGCAATAAAGTGGAACATCACGGCGCCAAACAAGCGGTAGACGTATTTAAAGATACGCTGATTTTGTAATTCGCTAACCTGTGGTTATCAAAAAAAGCCAAGCAGTTAGCGATAATAAAAAGTTCTTTAACAATCAGGACTTTAGAAAAATGAAGTATAGCAAAAAGAGCTGTGTTATACTTCGCATCACTTCCTGAGTAGAAGCTTGGCGAATTAGGGGCTGCAAAGCCTTATCGCGCAAGGCTTCAAAACCCAGGGA # Right flank : CAGCTAGAAATCACTGTAGGTTTGGCTTCTACTGCAATGATAAAAGGGCAGGTGACTGCCCTTTGTTTTTATCTTTTTAGACTTTCAATAAGAATTCGTGTTGGAATCTGTGTTTATAGATATCGTTCTTAAATTTTATCGTCCAACAATAATTCCACTAATCGTTTTGCCAGCGGGACGTAATGGCCGCTAAAGCGGTGGCTGAAATTAAGCAAATAATAAAGTTGGTAAACCGGTTTTCTGCTTACGTAGTTTTCGTCAATCGGGAAAGTGCGGTCATAATTTTCATAGAATTCGTCCGGAAACGGTTCGAATAATTCGGTGAAAGCCAGGTCGCATTCGCGATCTCCCCAATAGCAGGCGGGGTCGTAGGCATAAACTTTTCCGTCAACGGAACCGACATTTTCAATCCATAAATTGCCGTGTAATAACGACGGCTGCGGTCGGTGTTTGGCTAATTTTGCCGCGATGGTATCTACAATGACTTTGATAGAACCGAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //