Array 1 110931-100464 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRSM01000004.1 Ectothiorhodospira shaposhnikovii strain DSM 243 scaffold0004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 110930 29 100.0 32 ............................. CTCCTGACCCCTACAAAAATTTCTTGATTCCC 110869 29 100.0 32 ............................. CCGGCGCACGTCGCCAGGCTGCACGGTCTGCC 110808 29 100.0 32 ............................. TCCCCGGACCTGTTCCGGGAGTTCCAGCAGCC 110747 29 100.0 32 ............................. ACGAACGCCTGGAGGACGTGGTGGCGGAGCTG 110686 29 100.0 32 ............................. CTGGTGGTCGGCAGTTCAATGGCGGACGTTCC 110625 29 100.0 32 ............................. TCCGTGATTTACGGCCGGCTGCGCCTGGAGAC 110564 29 100.0 32 ............................. CCCTGACCGAGAGCCTGGCCCAGGACCTGGTC 110503 29 100.0 32 ............................. TCATCCCAGGCGCGGCGGATCAGCACCAGGGA 110442 29 100.0 32 ............................. GAAACGACCATGAGCTACGAAAAGGTAACCGA 110381 29 100.0 32 ............................. CCCCATGGCCGAAAAAAACGGCGGCCAGTAAG 110320 29 100.0 32 ............................. CTGGCCGGCGCGCATGGGCTGGAACATGTGGA 110259 29 100.0 32 ............................. GCCGAACCCGAACTCGGCACGGACCAGTAGCT 110198 29 100.0 32 ............................. GCGGCGGTGAAGAACAGCCGAGGGGAGCCCAG 110137 29 100.0 32 ............................. CGTCCGTGCTGTAGTTATAAATAGCCCACAGA 110076 29 100.0 32 ............................. GCGTCCTGTGCGTTGCGCGCGGCCTGCCTGGC 110015 29 100.0 32 ............................. ACAGCAACATGCAAAGCGAAGCACTGAACGAA 109954 29 100.0 32 ............................. CTCCTGGATTCGGCGGGGAACGTAGGGTACGT 109893 29 100.0 32 ............................. GCCAACGACTGACCGCTGAGGGGCGGCACGCC 109832 29 100.0 32 ............................. TCCGCGGAGTCTGGGCGGACGGTCCACAACAG 109771 29 100.0 32 ............................. GCGCCATCCGGGAGAAGCTGGAGGAAATGGGG 109710 29 100.0 32 ............................. CCAGACCACGCCGCGCCGGCAATGACCCGAAG 109649 29 100.0 32 ............................. CAGCCTCAGCAGCATCCCGGGCTTCAGCCGTT 109588 29 100.0 32 ............................. CCTGGCTTTGACCTCCCGCCGACACTCACAGC 109527 29 100.0 32 ............................. TGGACCTATGATCTCGTCCAGGGGTCGAAAAA 109466 29 100.0 32 ............................. ATCACGATCTACAACGCCTCCCACGCCACCAC 109405 29 100.0 32 ............................. CGCACCGTGGACGGCAGGATCATGACGGGATC 109344 29 100.0 32 ............................. GGCAACAGCACTGCCTACGCCAGCAGCCAGAG 109283 29 100.0 32 ............................. ACCAGATCCGCGCGCTGCTGACGGAGCACATA 109222 29 100.0 32 ............................. GGCACGCTGCGTTCCGGCAAGCTGGACGAAAA 109161 29 100.0 32 ............................. ATTTCGCGGGCGGCCAGCTGTTCATCGAACAT 109100 29 100.0 32 ............................. ACGTTTACCGGGTGACCGACTGGGAGCCCCTC 109039 29 96.6 33 ............................A GACGCGACTGACCCCGCAAATGCTTGAGGACCG 108977 29 100.0 32 ............................. CTAACTTCCGGCACCCATTTAACAAGTGCGTC 108916 29 100.0 33 ............................. CGCGTACAGGTGCGAGCGGCAAAGCGTGTTAAT 108854 29 100.0 32 ............................. CCTGGAACACCGGCCACCCTGGCGGGGTGGCC 108793 29 100.0 32 ............................. GCAAACTGTGCTGTTCTGCTGGCTACTCAAAG 108732 29 100.0 32 ............................. GTGATTGAGAAGTCACGCCGGATCGGGCTGAG 108671 29 100.0 32 ............................. GCTTAATATTCCCGCTTGAGACACAATAAGAG 108610 29 100.0 32 ............................. CCCGGGGGACTGCCTGGCGGTGATCATGCAGG 108549 29 100.0 32 ............................. TCAGTGAAACGATCCTCGCGGGTGTGCCAGGC 108488 29 100.0 32 ............................. GCCACGGGCCAGGAGGGAACCGCCCCATGGAA 108427 29 100.0 32 ............................. CCTGTCGCGCCTGGTACAGTCGAACCGGGGAA 108366 29 100.0 32 ............................. TAACGGTGTAACGCCGGGGAGATACACCCCCA 108305 29 100.0 32 ............................. TGGGTCAAGGGCATGATTTTCTCCTGATCCCC 108244 29 100.0 32 ............................. GTCTACGTCCTGCGCTACCGGACCCAGGCGGG 108183 29 100.0 32 ............................. TCGGCCAACGATTACACGGCGGAGCATCGTCA 108122 29 100.0 32 ............................. CTCGTCAATCAGCGGCTCTGCATTATCCGGAA 108061 29 100.0 33 ............................. AGCCAAGAGATAGCGTCCGCCAACTTGTCGCAC 107999 29 100.0 32 ............................. CTTCTGCGGAAGTATGAGAAGGTGTCGTTTGC 107938 29 100.0 32 ............................. CACTTTCTTGCCGACTATTGGTTTGTGGGCCG 107877 29 100.0 32 ............................. TAAGGGTCTGCCTCATGCACACACCATGCGAT 107816 29 100.0 32 ............................. CAGGGTTTTTCAGTCAGGAGCCGGACAAGAGC 107755 29 100.0 32 ............................. CAGCGGTTCATGCTTGACCGGGCTCAGAATAT 107694 29 100.0 32 ............................. ATCGTGGAATGCTTTGAGTCTGGGCAGCGCCT 107633 29 100.0 32 ............................. ATCGCGCATCGTTTCTTCATTCATACCAGCTT 107572 29 100.0 32 ............................. AATTAGCTGAGGAGATTTGTTACCGCATTGCC 107511 29 100.0 32 ............................. CTGCAACACGCAATGACAACAGCGACGATACG 107450 29 100.0 32 ............................. CGGCGCCTTGTGGGTCGGTACTCCGGCGTCAT 107389 29 100.0 32 ............................. CCAGCCAGGGCGGCGGCCTTGGCGAACGTCGC 107328 29 100.0 32 ............................. GCAGGAACCCAAGCACCACGGGCGCAATCCGG 107267 29 100.0 32 ............................. TTGAAACCTTCACCGTTGACCGGGTGATATAC 107206 29 100.0 32 ............................. ATGCAGGGGGTTGGGGTATGACCCAATACACC 107145 29 100.0 32 ............................. TGGTACCACTGCCGGGAGGTCAGCATCAGCAG 107084 29 100.0 32 ............................. GCTTTTCGGGCAAAGGCACGAAAATAGCGGTC 107023 29 100.0 32 ............................. CCCTCAACCAACTGCCGGAGTGAAATCATGAA 106962 29 100.0 32 ............................. AGATTGCTCAAACTGCCATTCCCGCGCAACCA 106901 29 100.0 32 ............................. TAGCGCCAGGTGTTGGGCATGTCCCCGTCCAC 106840 29 100.0 32 ............................. GAGGCGTTCTTGCCTTCGGCCCCCGGCCTAGA 106779 29 100.0 32 ............................. TTCGTGGCATGGACTGAGGACCCGGTGATGCA 106718 29 100.0 32 ............................. GCTTCCGTGGACATGGAGTCCGCAGCACCCGC 106657 29 100.0 32 ............................. TAGGCGAAAAACGTCGAGACGTTGTCCTGACC 106596 29 100.0 32 ............................. CTGTTCAACCCTGAGTCCGGCGAATCCAAGGC 106535 29 96.6 32 ............................C GCGTTGAAGGCCGCCTGGCGCTGCACGTCTTC 106474 29 100.0 32 ............................. GTTGCCGTCGTGCTTGCCGCCGATGATGGGGT 106413 29 100.0 32 ............................. CCTCCTGCAGGATCGAGACGGCCTTGTCGATC 106352 29 100.0 32 ............................. TCTCCGCTCTCGATCACCACTGTGTACCGCAC 106291 29 100.0 32 ............................. CCTACCGTCCAGGCAGGGCGGCCACCTGGTAG 106230 29 100.0 32 ............................. GCATTTCTTCCGAAAACAGCGGCAGAGGATCA 106169 29 100.0 32 ............................. TAGCAGGAACAGGGATCACGGGAGACATAAAC 106108 29 100.0 32 ............................. CGGTGTGCTGGCCAGGGTCGTGGCCTATGCCC 106047 29 100.0 32 ............................. CTATAGGAAGCCGCCGCAGCACGGCGGGGCAG 105986 29 100.0 33 ............................. TACGGGCATCAGGATGGCGGCCGCCTGCACCCA 105924 29 100.0 32 ............................. TTGGACGAAATGGCAGCGAAAACCGCACAGGT 105863 29 100.0 32 ............................. ACCTGCTTCCCTTTGTGGACAAACTTGGGCGC 105802 29 100.0 32 ............................. TTTTCCGCCTCGGTATTCAGAAGACGCCCGAA 105741 29 100.0 32 ............................. GCGCAGACAGTTGAACTGGCATTGACCCTTCC 105680 29 100.0 32 ............................. TAAGGAGAACAGGACATGGCTTTTTATTTTGA 105619 29 100.0 32 ............................. GAGGTATACGCTGAAATGAGCCGGCGTATCGG 105558 29 96.6 32 ............................C ATACGGACTCAGCTTAGGGGGTCGGGTCGATC 105497 29 100.0 32 ............................. TCAGCTTCATGCTCGGGAGAACGACAAATCCA 105436 29 100.0 32 ............................. CGATATATGTCTGCTGGCCCGACTCAGTTGTC 105375 29 100.0 32 ............................. GCCGTGCTCCATCAACCGATCAACCAGCCTGC 105314 29 100.0 32 ............................. GCGGTGCGTCATGGCTGAGGCATGGTGGATCA 105253 29 100.0 32 ............................. CGCGCCATACAGCCACTCCCCAATGCGATCCC 105192 29 100.0 32 ............................. GCGGTGTCGATCCTGCAGGAGGCCTATCAGTT 105131 29 100.0 32 ............................. CCATTGGAGGATCTGGTACGGGAGCTGGACCA 105070 29 100.0 32 ............................. ACCTGATCCATGCCGCCGACCGCATCCATCGC 105009 29 100.0 32 ............................. GCATCCCGCTCGGCCTGCAGCTCCTTGGTGTG 104948 29 100.0 32 ............................. ATGTTTGAGGAGAAGGCCTGATGGAAGCTCAA 104887 29 100.0 32 ............................. GTTTAGGCGGCCCGGCCTTCGGGCGCGGAGAA 104826 29 100.0 32 ............................. ATCGTAGGGGTGACCGCCCCGTCGGTTGAGGC 104765 29 100.0 32 ............................. CCCAAGCCCGCCTGAAACTTGAGCATGACAGA 104704 29 100.0 32 ............................. CCCAGAAAATCAGGGTAGGCGCAAGGCGCTAC 104643 29 100.0 32 ............................. GGCCTGCCGACAGGGATGGTCACTATGAATAC 104582 29 100.0 32 ............................. ACCCGTACCGGGATCATGTGATCACGGATATG 104521 29 100.0 32 ............................. TCTTGACGGCCAGCGGGTGGCCGACCGGGATA 104460 29 100.0 32 ............................. ATGACCGAGGTTGTCATGATGGCGATTTTCCC 104399 29 100.0 32 ............................. GGAGTCCAGCGCGGCCCTTCCAGGGGGTCGAG 104338 29 96.6 32 ............................T ATTGCGATCACGCCACCGTGTGTCACAGCAAT 104277 29 100.0 32 ............................. GCCTTTGTGGAATGCACAACGGACCCCTTCCC 104216 29 100.0 32 ............................. TCACTTACTTTTGTGGGTTGCGGCTGTTTCAT 104155 29 100.0 32 ............................. ACGCCGAGCGAAAATATCAGCAAGTCGTGACA 104094 29 100.0 32 ............................. GCGTGACGTTGCTTTCCATGTAAAGCTGCGTT 104033 29 96.6 32 ............................A GCAGCGGTTGTGTCAGTGGTTGGAAGACAACT 103972 29 100.0 32 ............................. GCACGTCAAACGCTGGAGCCCTCTGCTATCGT 103911 29 100.0 32 ............................. CCCCCTCCGCAACTGAGGCAACCAAGTGAACA 103850 29 100.0 33 ............................. CATTGATGAGATATGGTCAAGTGCGTCGGGCAC 103788 29 100.0 32 ............................. GTCTACCCCCTGCTCGTTCAACAGGGCCTATA 103727 29 100.0 32 ............................. GCCGCCGATCTTGTTCAACTCCTGGCGGAGCC 103666 29 96.6 32 ............................C CCACCAGGCTGCCACCGGGTAGCACGTCCAGC 103605 29 100.0 32 ............................. CTCTCTTGCGCTGGGGTCAGACTCACGTCAAC 103544 29 100.0 32 ............................. TTTTTTCGGCCCCTCGCCTACCGCCAGCCACC 103483 29 100.0 32 ............................. CCGTGGCAGACGGGCACATTGACCGCAACGTG 103422 29 100.0 32 ............................. CGCAGAGATGCGCTGCGTGTGCTCGTCCACTC 103361 29 100.0 32 ............................. GCTGGCTGATGCCCCATTCCGTAAACCAGTCC 103300 29 100.0 32 ............................. GTCGCGCAGGCCTTCATCGAGGTGGCGAAGTA 103239 29 100.0 32 ............................. CATGGCGTTCGCGAGGAGTTCAGGCGGGCCGC 103178 29 100.0 32 ............................. CCGGAGGCGTCCGGGTGCATGCTGCGGTAGGC 103117 29 100.0 32 ............................. GCGAACATGGCAACGCTCACCGCGGCCACCGT 103056 29 100.0 32 ............................. GCCGCTCGCCCTATCGGGTCAGTTGCGATGGC 102995 29 100.0 32 ............................. ACGGCCGTCAGAAACGGCTCGTCGATCACTAC 102934 29 100.0 32 ............................. GCCCGCGCCGCGTCTCTCAGTTTTTTGCCGGA 102873 29 100.0 32 ............................. TTCGGGCGGCCGGCGGCGTACTCCGGCCCTGC 102812 29 100.0 32 ............................. GCATCCTGAAGGGAAGCGGCTGCTGGACGCCA 102751 29 100.0 32 ............................. AAATGACAAACCTGATGCGCGGCGGTGGTGAC 102690 29 100.0 32 ............................. GATTTTGTCGGGTTGGACGTTGATGAACGTGT 102629 29 100.0 32 ............................. AATTGTTGGATTACCAGAGACGCGGTGGTAAT 102568 29 100.0 32 ............................. GCTTTGTTGACAACACAGGAGCCCCCAGGAGA 102507 29 100.0 32 ............................. TTGTCCCAGGGCTGGTACCGGGAGCACATGCC 102446 29 100.0 33 ............................. TCCGGCTCGCCACCGGCCGCGCCATCGAGCCCC 102384 29 100.0 32 ............................. CTCCAGGTCAAGGACAGCATCCCCGTGTGCCA 102323 29 100.0 32 ............................. TCCAGAAGCTCAACCCCCTGCTACTGGAAACC 102262 29 100.0 32 ............................. GGGGTGCAGGGTTGCCCCCGGGTTGCATCGCC 102201 29 100.0 32 ............................. CCAATGCCTTTGTGGCTTGGCTGCAGGGTCAG 102140 29 100.0 32 ............................. ACCCCTGGCGCGCTCTCAAAGGCGTAGATCTG 102079 29 100.0 32 ............................. CCGTAGAGCGGGCTTTTGCTTGATTCATCCCC 102018 29 100.0 32 ............................. CCCGTGCCGCCGGTGGTGGCCTGTCCGGCGCC 101957 29 100.0 32 ............................. ATTGGCGGGGAAAAGCACGTAGAAATGGAGTT 101896 29 100.0 32 ............................. CGATAGGGGTTGCAGCAACACATCCCGCCTCC 101835 29 100.0 32 ............................. CCTCGTATGAAACCACAAACCACGTCGGCCCA 101774 29 96.6 32 ............................A CCTTCAACGTATGCCGCCATCATGCAGAACAT 101713 29 100.0 32 ............................. GCTGCACACAGCTAGATCGTTCCCATGCTCCA 101652 29 100.0 32 ............................. AAGGAGTTGTGCTGACTCTCCTGATAGTTCAA 101591 29 100.0 32 ............................. TTCGAGACAGTCATCATCGTTCCCAGTGATGA 101530 29 96.6 32 ............................A GCCCCTGATCCGATTCACCTACCGGAGGGGCG 101469 29 100.0 33 ............................. CATAGTGAGACGGTGTTCTTCTTACCATGTATC 101407 29 100.0 32 ............................. TTTACGCCGGTCGGCAGGGTCAAAAACTTCGG 101346 29 96.6 32 ............................A GCGTGAGGGCGTGTTGAACTATCAGGAGAGTC 101285 29 100.0 32 ............................. GCCTGAGCGACCTTCGGGCTGAGGTTTCCGCG 101224 29 100.0 32 ............................. ATCGTCGAGGGATCGACGAGTGCTCGCCGAAT 101163 29 100.0 32 ............................. GCAAATGGACGGATTTTCAGAGGCCGTACGTG 101102 29 100.0 32 ............................. CTGGAGAAGGAATACTGGCCCAAGGGGATGGA 101041 29 100.0 32 ............................. CCTTCCCTGTCTCCCCTGATGCCGTAGCAGTT 100980 29 100.0 32 ............................. GTCAAATTCATTGCTTCGGCTCCATTACGGTA 100919 29 100.0 32 ............................. GCAGGTTGTGTAGGTCCTCCCTGTGCGGGTAA 100858 29 100.0 32 ............................. GTCTGATCCGACATTATTGCCCAAACCTCCGG 100797 29 100.0 32 ............................. CGCGCATGGGCAGGTGTATCGGTGCGAGGGTC 100736 29 100.0 32 ............................. GGCACTGGCCGAGCTGTCCGTGGCCGAGCTGC 100675 29 100.0 32 ............................. GCCCTGTCGGAACAGTTCGACGCCGCCGCCAA 100614 29 100.0 32 ............................. ACACACCAGAACGTCCTGGTATTTGTTAAGGG 100553 29 100.0 32 ............................. CCGTCGAGTCCCAGCCCAGCGCCTTGCTTTTC 100492 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 172 29 99.8 32 GCGTTCCCCGCAGGTGCGGGGATGAACCG # Left flank : GGCGCCAGCCATTCCTCTTGCGGAGCCTTTGGGTGATGCTGGTCATCGTGGTTGAAAATGTGCCGCCGCGCTTGCGTGGGCGTCTGGCTATCTGGCTATTGGAAACGCGAGCCGGGGTTTACGTTGGGAAGGTCAGTCGTCGGGTTCGTGAGATGATCTGGGAACAGGTGGTAACCGGTATAGAGGATGGCAATGCCGTGATGGCTTGGTCCACCAATACAGAGGCTGGCTTTGATTTTCAGACCTGCGGTAAAAACAGACGCCTTCCATTGGACCATGACGGGATGAAACTCGTGTCTTTTTTTCCCGATCCAGTGGGGGATGAAGGAGGAAACTGATGCGCATGTGTTGGTACAAATCCTGACTGCCTCTGTTTGTTATGTATAACTACTTGATTTTTAATGCTCTTTAAAAACTTGGAAAGTGTAATGAAAGGAATAACTGTTGGTAGAGTTTTTTGTGATTTAAAAATTTAATTTTTTCATGGGGTTAGAGGAAGT # Right flank : AAATGACTTGGCGGCGCCTCTGCCGCAACGTCCGCAGCGTTTCGTGGTATGAGCACGACAGTCCGATGCGCTCGCCAAGTCTTACAGGAGCATGGCTGTGATCGAAGTACAGATCGACGCCAGCGAGGTGATTGCCGCGCTGGAGCGCCTGGGTAAGGCGACCGGCAATCCACAGCCCGTGACGAGAAGATATTCAAGATCTCTCGGGAGATGGTCCATGAAGTTGGTCTTTCAAGGTTTTCTGCTCATGCTGGCCGCCATAGGGTTGGCTGCAGCCTCGGTGGATCTGGCGGTGATGGTTTTGTTCGCCGCCCTGGGCGTGATCGTTACGGGCTTGGTCCGGGCGTTTTTGGCATGACTGGGTGTCGGTGGTGCACGGGTTCGAACCGGACATCTCGCGCAGGGCGCTTTGCCTCCCCCAGGGAGGATCACCACCGCACCCGTTATCGAGCATAGCTTGCGGCCATTACATGCCTCAACCCTAATATTCCACGCCCACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCAGGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCAGGTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //