Array 1 1097239-1097390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1097239 30 100.0 31 .............................. TGATCTTCGTGTACCGCGACGCGTCCGGATC 1097300 30 96.7 31 ............................A. GGGTGTCGGCGGCCCACTGGCCGAAGGTGGG 1097361 30 73.3 0 .............AT......CATTC.T.. | ========== ====== ====== ====== ============================== =============================== ================== 3 30 90.0 32 GTCGTCCCCGCACGCGCGGGGGTGGTCCCC # Left flank : CAATAGCCAAACGCTGGGGCTTCCCCAACGCCGCCCACTTCAGCCGCACGTTCCGCTCGGCTTACGACGTCTCCCCGACGGCATGGCGGGACTTGCACGTCCCGCCGACTGTCGAGCCGCCTGGAGCGTGAGGGGGCTACGCCGTCGGGGACGCGCACTGGCATGGCGCAGCGTGGCGGCGGTGAAGCGGTCTGCTGCCCAGCGCCGCCAACGCACGGCAACCGCGCCACCCACCGTCCGAGGCGGCGCCCAACCGCACGCCTCCCGAGCGGCGTCCTTTGCCGAACCAATCGGCGATCCGACCCAGTTACTCAACCCAGGCTGCCTGCCTACGCATAAGCTGACCTACAGGCTCGGCCCCGAGCCGAACACCAGCACAGTCCGGAGGACTTGGTCTGTACATTGCGCTGTGCACTCTGCTCACCCGGAGGCTCCCGATCGCAGATCCGCAAGTGGAGGAAAACGGGCCCCAACCCGAGAAAAGCCGCAGGTCACGAAGT # Right flank : CCAGCGGCTACACCCGGTCGCGCGCCAGAGAGGCGTCCCGCACACGCGGCCTGGTCGGTTGTGAACGCACCAGCCCACCGAAGTCTTCGAGTCGCCCTTCACGGGCGCAGCATGGCGAAGCCCGACCCCACCCCCCGCCACTCACGCGGCGACACTCCATACGCCGCCCGGAAAGCGCGGCTGAAGTGGGCCGGGCTGGGGAAGCCCCAGCGGAGGGCGACGGTGGCGATCGTCGGGCGGTCCCGTCCCGGTGCGGGCCGGGTGAGGTCCTTGCCGGATTCCTCGACGCGGCGGCGGCGGATGTGGCCGCCGACGGTGGATTCCTCGTCCTCGAAGAGGCGGTGGAGGTAGCGGACGGAGATGCGGTGGGCGCGGGCGACGGTTTCGGGGGTGAGGTCGGGGTCGGGCAAGTGCCGGTCGATGTAGCGGTACACGGCGGGCAGCAGGTGGTCCCGGGCCGTGCCCGGGCGGTCGGCGGGCTCCTCGGCGTACGCGTCCAC # Questionable array : NO Score: 3.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1368765-1369892 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 1368765 30 96.7 31 .............................C CTGTCGTGGCCATCGTCGCGGCGATCCTGGC 1368826 30 96.7 31 .............................G CTGTTGGTCGTTGCCGGGACCTTGCCAGAAT 1368887 30 96.7 31 ............................G. GCGGGCGGCGCGGCGGGAGCTGCGTCGGCTG 1368948 30 100.0 31 .............................. CCGCCCACCGCAGTTCCCCCACCCATTCCCG 1369009 30 96.7 31 .............................C GAGGGACGTAGTAGGAGCTGTCGGTGAACTG 1369070 30 100.0 31 .............................. GGCCATGCCCGAACGCCCCCTGCTAGCCCTG 1369131 30 96.7 31 .............................G CGCTGGAGTACCACGTCAACGGCGTTGTCGA 1369192 30 100.0 31 .............................. CCCAGCTCACGAAGACGGAGCACCAGGCCAT 1369253 30 96.7 31 .............................G GTGCAAGGTCACACCATCCGAGGAGCCCCAT 1369314 30 96.7 31 .............................C AGCTCACCGTCTCCGTCCCCGACGACACCGT 1369375 30 96.7 31 .............................G CTCGGTTCTGCTCGCCCGATGGCTGGCTGAT 1369436 30 100.0 31 .............................. CGAAACGATTCTTCGACGTCCTGCTGGAGCG 1369497 30 96.7 31 .............................T GTGGCCCGGCATGCTCATTCAGATCCCCGCC 1369558 30 93.3 31 ............................AC AAGATCACGACCGCGTTCGGGTACGACGCCG 1369619 30 96.7 31 .............................C TGCTCGCCGTACGCGCCCCGCACCGCCAGGA 1369680 30 96.7 32 .............................T GGTGATGGGCCGGACAAGGCACAGGTGAGCTG 1369742 30 96.7 31 ............................A. CGACGCTGCCTCGGGAGCAGCGGATCGTGCT 1369803 30 100.0 31 .............................. CCTCGGCGTAGGCGTCCTCCAGCTCCATGGC 1369864 29 96.7 0 .................-............ | ========== ====== ====== ====== ============================== ================================ ================== 19 30 97.4 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Left flank : GGGACGAGCCGATCTGGTGACCGTCATCATCCTCACCAACTGTCCGGCCGGACTACGCGGATTCCTCACCCGCTGGCTGCTGGAGATCTCCCCCGGCGTCTTCATCGGCTCGCCCTCAGCCCGCGTGCGCGACATCCTCTGGGCCGAGGTCCGCCAGTACTCAGGCCACGGGCGCGCCCTCCTGGCCCACCAGACGAACAACGAGCAGGGCTACACCTTCCTCACACACGACCACGCCTGGCATCCCACGGACCACGAGGGCCTCACCCTCATCCACCGCCCTTCGACCACGACTCGCAGCGAAACTTCCGCAGAGCAGCGGTCTGTGCCCCGGCAGGGGTGGAGCAATGCCTCTAAGCGGCGACGGTTCGGGGGGCGTTGAGGTGCCGGGTGGTGGCGTTGCCCTGCCGAGCGAAATGAGAGCTATGCCCGTAAAGTCTGTCTCCGTGAAGATGAGTAAAAACTGGGTGCGGAGCGGATAAGGGTGCAGGTCAGCTCCT # Right flank : ATGTCCAGCAGCAAGCAGATGACGATCACCGCGGTGGCCCCGTCACGCTGGGGGGACCCCGGTAGCCGGGACCCCGCACCGCCGGAGGCGGATGCCCCGTGCGCTCGGAGCTTCGCCTACCGCCGCAACCCCAGCACCCGGTGCGGCCGGTACGGCGCCTCCAGGCGGGCGGTCTCGTCGTCCGTCAGGGTCAGGTCGACGGCGGCGACCGCGTCGTCCACGTGGGAGGTGCGGGTGGCGCCGATGATCGGGGCCGCCACGACCGGTTTGGCGAGGAGCCAGGCGAGGGCCACGCGGGCCGGGGGGAGGGCGCGGGTGGTGGCCACCGCGCGGACGGCGTCCACCACGTCGAAGTCCGCTTCCTCGTAGAGGCGGCGGGCGAGTTCGTCGTTGCCGGAGCGGAGGGTGCGGTGGGTGCCGGCGCGGTCGCGGGTGCCGGTGAGCATGCCGCGGGCCAGGGGGCTCCAGGGGATGCAGCTGACGTTCTCGTCGCGGCAGAG # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4160392-4159767 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4160391 30 96.7 31 .............................A GGCCCCGGTTGGCCGCCGTGTCCCTTGCGTC 4160330 30 100.0 31 .............................. CTGTTGGTCGTTGCCGGGACCTTGCCAGAAT 4160269 30 96.7 31 .............................T ACACCTACACGCGCGAGATGACCATCGAGGT 4160208 30 96.7 31 .............................C GCGCTGGCAAGAACAAGGGCGAGAGCTGGGA 4160147 30 96.7 31 .............................A AGCGCCTACGGAACGCGGCCTCCAACGCCTT 4160086 30 100.0 31 .............................. ACGACCTCCTCGACGCCCTGTACGACGAGCG 4160025 30 96.7 31 .............................T CCGGACCGTCCACGTCGCCAATTTCGGCACA 4159964 30 90.0 14 .........................GTT.. ATCGGTCGGGCCCG GA [4159936] Deletion [4159921] 4159918 30 96.7 31 A............................. GCGCCCCCAGCCCGGTCCTGCTCAGCTCCAG 4159857 30 100.0 31 .............................. TCTTGGGGGAGACGCCGCTGAGCGCGCGGAT 4159796 30 93.3 0 .............G...............A | ========== ====== ====== ====== ============================== =============================== ================== 11 30 96.7 29 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CAGTACCTGGCCCCGATCTTCCAGTTCGCCCTCGGCCTCGCCGTCTTCCACGAGTCGATGCCGCCGGAGCGGTGGGCGGGCTTCGCGCTGGTGTGGCTGGCGCTGGCCATGCTGACCTGGGAGGCGATGCGCTCGGCGCGGACGACGCGGGTGGAACTGGCGGCGGCCCGCGAGCGGGTGGCGGCGGAGACGCCGGGGTCCGACGGGCCGGGTGTGGCGGCGGGCGCCACGGCCCCGGCGGAGGCGGCGCGGCCGGAGGCCGCCGTGGAGGCGGCGGCGGGTGTCGTGAGCGAGCCGGACTCGGCGGCGGGGCGTGGCGGGGCGTGAACGGGTGGGCGCGGGTCGGCGCTTGGCTTTACGATCTGGGGCCTGAGAACGCTGCCCGTGCGCTCAACGCAAAGCCCTGGAGGCCGGTTTGCTATGAAACAGTCCGAATGCCGGAGTCTGCGAAAGTGAGTAAAAACCGGCCTGCCGCTAGTTAAACGCGCAGGTCACGCCCT # Right flank : TCCAATGTCGGGTAACAGACCCAGCCCACCAGCGACCCCGCGCACGTGGGGGGCCCGAGTACAGGGCGGCGTCCTCGATCGCGACGCCGCGGTCCCCGCACGCGGGGGCACCCCCGCCCGATATCCGGATAGCGAACCCCCCTGTCCGAATTCCGCCCTTGACGGATCTCCGAAAACCCCTTGAACATCATGGGCACGTCAAAAGGACGGGAGCCCCCCATGCTTGATGTCCAAGGTCCCACCCTGCCCACCAGCCCCCGAAGACGCCGCCGTTCCGCCACCCTCCTGGCGTGCACCGCGGCCGCGGCCGCGACGCTCATCGGCGCGTCTCCGGCCCTCGCGGGGCCGGGCACGGCAACAGTGGCCACAGCGACAAGAACAACCACAACCGCCGACGCACCCGAGATACCCGCCGCCAACGTCAAGGCGCACCTCACCCAGCTCCAGTCGATAGCCAACGCCAACGGCGGCAACCGGGCCCACGGCCGGACTGGCTACAA # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.15, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 4889453-4888815 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4889452 29 96.6 32 .C........................... ATCCGGAAGCCGGTCCGGCCCTGGCCGGTGTA 4889391 29 100.0 32 ............................. GCCTGCGTGACCCGTTCGTGCCCGATCCGGTG 4889330 29 100.0 32 ............................. GGGCAGCCGGTCGACCCGCAGGCCGCCCAGGA 4889269 29 100.0 32 ............................. CCGATCAACCCGGCATGGGCGGCGGCGTAGTG 4889208 29 96.6 32 ..............C.............. TCGCGGCGGACGCAGCGCAGGGGAAGGGCGGT 4889147 29 93.1 32 ..............C..........C... GCGTCGTCCTCATACTCCGTCTTCCGCCTCTT 4889086 29 82.8 32 .............GCA.C..T........ TGACGGCGCGCTCACGCGAACTCGGCTGGCCT 4889025 29 86.2 32 .C.....T..........T.........G TCGCGCGCGAGCAGGTATTGGACGTAGTCGAG 4888964 29 86.2 32 .C............C...A.........T GTTTCCAGGTGGCAGACAGTGCCGGCCCGTAA 4888903 29 86.2 32 ...........CT.C..........C... GCCTCCCGCATGTGCTCCGCGACGCTGTCCTC 4888842 28 86.2 0 ...C........-.C.........A.... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 92.2 32 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : ACGTCCCGATCGACTCCGTCGCCGCCGACTCCCTCGGCGCCCGGCGCGCGTCCGCCCTGGCCCTGCGGGTGGCGCAGCAGGGGGACGTGCACTCCGTCCTGGTCCCGGACAGCGAAATCGTGCGCGCCCGGCAGGGATTGTGGGACGAACGCCGCATCGCCGTGGAACACGGCGGGGCAACGGCGCTGGCGGCACTCACGGCTGGAGAGGCGGACTCCGCCTCTTACGGATACCGGCCGCGTGCGGGCGAGAAGGTGTGCGTGGTCCTGTGCGGCGCCAACACGGATCCCGCTACGCTCACTGGTCCGGCGAGTTGACTGTCGGCTGGGGCAGTTGCCCAGCGGGCGGGCCGCCGCAGTGTCCGTGGAAGGCGCGCGGCGGCAGGACAACTGCCGCCGGACGAAGGGGGGGAGCCGATGTCCGGCACATCCGCTTTGCCGGTTCCCGCGAAAGCGGGTAAAAACGCCGCCTCTCACAGATGAAACCGCAGGTCGGCTCCT # Right flank : CGCGCCTTGCCCCTCGGCTCGGCCGCCGGCCGGGACGTCGTTGTCCCGGCCGTCCCAGGGGATCCGGCACGACAAGAGTCGTCCCCACCAAACGCCGAAGGGCACCCTCACCCCGCCCTCCGAGCCGCCCGGTTCCTCCCGCCCGGCCCCGGCGACAGCGCAGCCGCGAGCTCGTCCAGGGCGTCCGTCAGAAGCTCAGCTCCCCGCACCGTGACCCCCGTATCGCCCTCCGTCGCCGCCCAAGCCGCCGCCCGTAGCCTCAGCGGCGTCCAGTCCAGCGGCCGGCGTTCACGCAGCGCCTCGACCGCGTCCGGCAGCAGCTCGCGCAGCGTTGCCGCGAAAGCCGCCGCGCCCGGGGACGGTGGAGCGTCCGGCTCCGGCAAGTGGGCTTCCATGAGCATGGTGACGCGGCCCATCGTCGCCAGGGCGGATTCCGCCGCCCGTTCGGCGCTGCGGGAGAGGCCGCGGTGGCGGACGGGTTCCTTCTGGGCGCGTTCGGC # Questionable array : NO Score: 5.32 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 4898130-4897856 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 4898129 30 100.0 31 .............................. CGAGCCCTTCGGGGTTGCTGCTGGCGCGCTT 4898068 30 100.0 31 .............................. ACGCCGCCTTGGATGACGCGTGGGTGGACGT 4898007 30 96.7 31 .............................A ACGGCATCCGCAAGGTGTGGAATGGCATCGC 4897946 30 90.0 31 .........A...A...............T TGTACGCGCCAACGGACCGCTGAACGGTGGT 4897885 30 93.3 0 .............AT............... | ========== ====== ====== ====== ============================== =============================== ================== 5 30 96.0 31 GTGGTCCCCGCGTGCGCGGGGGTGGTCCCG # Left flank : GCCCGAGCAACGCCCGGCGCCGGGGCAGCCGCAGCACGGCGACGGTGACGACCGGCCCGGCCACCGTGACGACCAGGGCGTACCAGGTGACCAGCGAGCCGACGGCGGGAAGCGGCTGACGCAATTCAGCTGCCAGCCCGGGCAGCAGCCCGACCATGACCCACTCGCTGGTCCCTATGAGGAAGACGCAGGCGGTGAGGGTGGCGAGAACGGCGGCGGGGTGGGGGTGGGAGTGAGAGCGGGAGTGGCGGCTGGTGGGGGGCTGGACTGGTGGTGCCGGAGTTGGGTGGTGGGCCGCCCCCGGTGGAGTGCTTGGGGCCATGTCGCGACGCTAAGGTCTGACATCGGTGTGAGAGTCAAGTGCGGGTGGGGGTGGCAGGGGGCGATGTGTCGCCGACTTCATCGAGAACTGCGCGTCGGGCGGTATGACGTTTTTGCCGGATTCCGAGAAGGTGAGTAAAAAGCCTGGCCCGCCGGACTAAAACACCAGGTGGCGCCCT # Right flank : CGGCGGGCGCGAGCGACACCAAGGTCGTGTCGTGGGCCCCGCATGCGCCGGGCCCGCAAGTCGGCGCCGCCGCCCGCCCCTCGGGCCAACAGGCAGGCAGCGGCGCCGTGAGCGGTCGCGGGCGGCACGTGCCCGCGACCGCACCGCGACCGACTACTTCAGCGCCGCGTCAGCCGTGCTGGAGACGCCGGAAGTGGCGGACTGGGCCGTGGAGTTGGCCGTGTCCTTCAGGGCGGTCACCGGGCCCGGCTCGGGGGTGGAGGGGGCGGAGGCGCCGGGGGGGCGGCGGCTGCTCCTCCGAGGACGACGAGGAGCTGGACGAGCCGCCCTTGGGGTCGTACTTGTAGGTCTCGGTGACCTTGTGCTCCTTGGTGATCTGGCCCGGGGCCGGGGAGACGATCGCCACGGGCAGGGAGCCCAGGCCGTGGCCCTCGTGGTGGCGGCCGTGGTGGTCGTCCGCCATGGCCGTACCGGCCTGGCCCAGCACCATGCCACCGGCC # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGCGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-13.10,-13.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 5411688-5411292 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 5411687 30 96.7 31 ...C.......................... ACTCGCTTCCCCGGCGGGCCCGTTTCCGAGG 5411626 30 93.3 31 ............................TC CACGGGGCGCCCATCTTGACCTTGATCTCGG 5411565 30 93.3 31 ............................CC GGCCACAGTGCCCGCAGCGACAGGAGCGGCG 5411504 30 96.7 31 .............................A GGATGATGTCGGCTTCGGGCGTCTCCACCAA 5411443 30 100.0 31 .............................. TCGACAAGGTCACCCATGCCCGCCTCAAGGC 5411382 30 93.3 31 .........................C...C GCCCCTGGAGCGACATCACCGGCACGCCGGA 5411321 30 73.3 0 ......T....A.......A..AACC..C. | ========== ====== ====== ====== ============================== =============================== ================== 7 30 92.4 31 ATGGTCCCCGCGCACGCGGGGGTGGTCCGG # Left flank : AGGAGAACTCGGGCCTTGACGGCCCGTTCCGGCTGCTGAAGCTCATGGACGGCACGATGGTCGGACTCGGCGGGGTGCAGCTCTTCAGTCATGTGATCACGGACCACAAGCAAGTACAGGCCCTTGACCTGCTGTACGGAGTCATCCGGGCTCAGGCTCTCAGCCCACAGAAGTCACTTGCCTTCATCGAGAAAGTACTGGGAGAGACATGAAACTCAATGCCTCGGCTGAAAACGGTTCAGCGACGGGATGGATAAAGAGCAGCCACAGCGGCGCGAACGAGCCCTCGTGCGTCGAGGTGGCAGCGACCCCCGGCGTGGTCCGCGTGCGCGACTCCAAGAAGGAGGAAGGACCGTCCGTCGCGTTCCCGGCGGGGGCGTGGATCTCCTTCATGGGATTCGCTTCCGGCGGGTGACTCCACGGCTACCCGGGGGGGGAGCGGCCCTGAGGAAGTAAAGGAAAAAGCCGTCGCCCCCCAGGAATGATGCAGGTCACGAAGT # Right flank : GCGTCACCACCCCAGCCCACAACCAAAGCGCGGGGCCCGCAGCCGACAACCGCGGGCCCCACCGCGCCCCTTGAGGCAGGAGACCCCGCCCGCCCCGCAGGGCTAAAGCACCGGCAGCATCTTCCGCAGCTCGAACGCCGTGACCTCCGACCGGTACTCCTCCCACTCCTGCTTCTTGTTGCGCAGGAAGAAGTCGAAGACGTGCTCGCCGAGCGTCTCCGCGACGAGCTCGCTCCGCTCCATCAGCTCGATGGCCTCGCCGAGGTTCTGCGGGAGGGGTTCGATGCCCATGGCGCGGCGTTCGGCGTCGGAGAGGGCCCAGACGTCGTCGTCGGCGCCGGCGGGGAGTTCGTAGCCTTCCTCGATGCCCTTGAGGCCGGCGGCCAGGAGGACCGCGTACGTCAGGTACGGGTTGGCGCCGGAGTCGATGGAGCGGACCTCGACGCGCGTGGAGCCGGTCTTGCCGGGCTTGTACATGGGGACGCGGATGAGGGCGGAGC # Questionable array : NO Score: 3.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCACGCGGGGGTGGTCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 7 7306386-7306719 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083590.1 Streptomyces mobaraensis strain DSM 40587 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7306386 29 100.0 32 ............................. ACCACCGCTTTCTGGAAGGCCACCGCCGAGCG 7306447 29 100.0 32 ............................. CGGTCCAGAGTCCGTGGCAGGGGCCGCCAGTC 7306508 29 100.0 32 ............................. CATGGCCAGCAGGCAAGGCAGCAGGCGCATCG 7306569 29 100.0 32 ............................. CTCCGGTGACCGGCGAGCGGCTGGGTCCGCTG 7306630 29 100.0 32 ............................. CACACGAGCGTGGCCGTCGAGCTGGAGCGGCT 7306691 29 79.3 0 .............AC......C.TAC... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.5 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CAAGGACTTCTTCCACCGTCGCGAAGGGCTCCAGCGGCGCCTGCTGCCCGGCATGCCCGCCTGCCCCGACCCGCAGGGCTGGGTGACCGAGCACGTGCTGTGGCTGGAGGACGTCGTCGGCATCGCCGACACCCTCCTCGCGGCCTGGCGAGGCTACCTCCCGGACAGCCACATGATCGCCCTCCTGGAGGCTTACGCCCACCAGGCCCGACCGGCTGTTCCGTACGCTGCCGACCTGCTTCGCGCATGGGAAGCCGAGGCTTTCGAGTCCTGCTCGGTGGAGGAGGCCGGGTGGTGGGAGGAGTGGCACATCCCGGAGACGGAGCGGCAGGCGCTCGACGCGCTGAATCACCGGCTGATTCCGATTGGCGCGATGCTGGTCACGGCGGTGGAGCGGGGGGCTGCGGCGGTGTGACGTGGGGCTTTTGAGTCTTATGTCGCGATCTGCGGAAGTGGGTAAAAACGGGGGTGGGTCCGGGTAGAGTCCCAGGTCGAGGCCT # Right flank : CCTACTCCCCCTCTACCTCTCAACCCCCGCCCCCACCAACCGATACCCCCTCTTAGTAACCGTCCCCACCACACCCCCATAAGCCCCCAACGCCCCCCGCAGTCGCCCCACCGTCGCCTCCAGCGCCCGCAGCGCGTGCTGCTGTTGCTCGGGCTCCCGCCCGAGCACACCGCCCCCCGCCACCGGCCACAGCCGTCGCACCAGTTCCGCGCGGCTGAGGACGGTGCCCGGGCGTTCGGCCAGAGCGGCGAGCAGGGCCGCAGGCAGGGGCGGGAGGCGGAGGAGGGTGTCGCCGGTCAGGACGGCGGTGCCCTGGATGGTCAGGGGCCCCGCCGGGGTGGTGAGTTCGCGGCGGTGGCGGCGGGGGAGTTCGTCGGTGAGGAGGCGGACGAGGGAGCCGAGGCGGCCGCGGTCGGGCCAGGCGCAGGGGACTCCGGCCGCCACAAGAGGGCGGGCACACAGGGGGCCTATGCAGGCGGCCACCACGTCCTGGCGGAGGG # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //