Array 1 46828-44880 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLFB01000008.1 Acinetobacter baumannii strain AS012739 AS012739_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 46827 29 100.0 31 ............................. ACTACAACTCCTCCTGCAGATACGCCACCTT 46767 29 100.0 31 ............................. TGTGACCACCAGTGGAATCCAGTAAATTATT 46707 29 96.6 31 ............................T TACTAATCCACATTCTTCAGATACATATCTT 46647 29 96.6 31 ............................T CTATAAGTCATGAAATCAATTTCATGGCTTT 46587 29 100.0 31 ............................. AACTGCTTTTTTTGGGCTTCCTTCATACATG 46527 29 96.6 31 ............................T TGTATTTATACGGTTAATAAATCAGTACAAT 46467 29 100.0 31 ............................. TCTTAAGTTCGAATAAACGTACAAATGGGAT 46407 29 100.0 31 ............................. TAACGAGAAGCGTTGCGTAGACTTACAACTC 46347 29 100.0 31 ............................. AGAGCAACTAATTCCCCGGCTGTTACTGGTA 46287 29 100.0 31 ............................. TAAGAAGTGTGCTCATCAATCTGTGCTGAAG 46227 29 100.0 30 ............................. AAAAAGGCAGCAATTAAGCTGCCAAATCAG 46168 29 100.0 31 ............................. TATGATGAAGACTGAAAACGAGAAGGTTCGC 46108 29 100.0 31 ............................. AGATCTGACCAGCTAAAACATTCTGGTTATC 46048 29 96.6 31 ............................C GAGGATGATGTTGATTATGTCATTAAGAAGT 45988 29 96.6 31 ............................T AGAAGCAGAAAATATCCAACTCATTGCTACT 45928 29 96.6 31 ............................T TGAATGTCATTATCTTCAGTCGCAATGACAT 45868 29 100.0 31 ............................. CGTCCACGGTAGCGGCGCCAAGGCTGCCAAT 45808 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 45748 29 86.2 31 ...AC........C..............T CTCAACTCATTGATTTTTTCTTCTCTTGCCA 45688 29 93.1 31 ...GC........................ TTTTTATTCCAAGGGCTTTTGCTTCTTGTGA 45628 29 86.2 31 ...GC......T................T TCAAATGATTTAATGAGCTTGTAGCCATTTT 45568 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 45508 29 82.8 30 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTT 45449 29 82.8 31 CG..G........C..............T TTATAACCACCAGTTAAAGTATTGACTAAAA C [45444] 45388 29 75.9 31 ...GC.G...A..C.AT............ CAATCGGGGACGTGGTCAAAAAGATTATCAG 45328 29 93.1 31 ....A.......................G TGTTGATGTTGTTGTTCAGATCGTTTTTGGT 45268 29 79.3 31 ...GC....T..TC..............G ACATGCGAGCTTTCATTTAAATGTGTCATCA 45208 29 93.1 31 ....G........C............... TTAAAGCATTTTCATATGAGCCTTCCTCATT 45148 29 82.8 31 ....A......TGC..............T TCGGATCAGTCCAGTCATCATTCTCGTCAAT 45088 29 86.2 31 T..G........G...............T ATTATTGCGCGACAGAACGTATCAATTAATG 45028 29 86.2 31 ...GC.......CC............... GATCTATGCAAGATTTATTGGTCTACATTAG 44968 29 89.7 30 ...TG.......................C AAGCTGATGCTTCCTTATGGTTACAGTCAG 44909 29 82.8 0 .G..G...................AT..T | C [44904] ========== ====== ====== ====== ============================= =============================== ================== 33 29 92.9 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAGAAAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACAT # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [43-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 51918-53266 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLFB01000008.1 Acinetobacter baumannii strain AS012739 AS012739_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 51918 28 100.0 32 ............................ TGGAACTGTTGCAGGTTATTGGACTACTTTTA 51978 28 100.0 32 ............................ ATGTATTTCAACATCTTCAACAGAAAGCTGAA 52038 28 100.0 32 ............................ GTGTACCCTGTTGTGAGAACGCATAATATTTA 52098 28 100.0 32 ............................ TGATCAAATCGTGGGGCTGTCCAGTACTGCTT 52158 28 100.0 32 ............................ TTAGTCATATTATAAGTAACTGTAGAATTATT 52218 28 100.0 32 ............................ TGGCTGACCTGTAATGAGTTTAATTGGCATTA 52278 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 52338 28 100.0 32 ............................ ACGCTTAAAAAAGCGTTCCCCAAAGCCAGTGG 52398 28 100.0 33 ............................ CTATGGGGGAGAAAATTATATTAGCTAAAATAT 52459 28 100.0 32 ............................ TAAACAAAACAAAGTAACGGCTGTAGGTTTTG 52519 28 100.0 32 ............................ AGATCGCAAACGCTGTTAAAGCCGGGGTTTTT 52579 28 100.0 32 ............................ AAAAGTGACCTCAAACGACCGAACCATATGAA 52639 28 100.0 32 ............................ ACAACCAATCAAGGTTAGTGAGAAAGAAGTGT 52699 28 100.0 32 ............................ TTGTTTGTAGTGTAACGGTTAGCTTATATGGT 52759 28 100.0 32 ............................ AGTATCTATATATCCTGATTTACCAAGTATAT 52819 28 100.0 32 ............................ GCAGCCGCATAGCCCGCTTGCAGTTGGTTTAA 52879 28 96.4 32 ............C............... TATATGGCCTATGGAACTATCCATAGGCCTTT 52939 28 100.0 32 ............................ AGCCTAATTGCGCACGTCCTTGTTCAACAAGT 52999 28 100.0 32 ............................ TTGAATTGGCTAAACCTGCATTGATTGCATGT 53059 28 100.0 32 ............................ AAATTGGGTACACCAATCATCTGGCAGGAAAG 53119 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 53179 28 92.9 33 ............CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 53240 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 98.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //