Array 1 1850241-1849527 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYU01000008.1 Clostridium botulinum B2 128 B2_128_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================================================== ================== 1850240 29 100.0 36 ............................. GTCTAATGTATAAGTTCCATCCCATACCTCGTGTTG 1850175 29 100.0 37 ............................. GGATGATAATAAAACAAAGACTAAGAAGCCAGACAGT 1850109 29 100.0 37 ............................. TAACCATTGAATTGTTAAATTATATTCACTTATATAA 1850043 29 96.6 36 ................A............ TAAGTTTACTCCACCTTTTGCACCTTTTCCACCTAC 1849978 29 93.1 36 ...............GA............ TTATTTTGATGCTTTGGTTTGTATAAGTACTCTTTG 1849913 29 79.3 116 .......CT..G....A....C......G CAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTGCTCATTCGAGGTGAGGAGAATGAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAGTATGCTTTTAAACT AG [1849906] 1849766 29 82.8 116 T.......T......GA...........G TAGCGAACCCAAATTTGCAATTTGGTGTGAGTCACTTACTCATTCGAGGCAACGAGAAGGAGTTTCATTAAATAATTAGACACTTAGTATTTCAAGTTTAGGTATGATATGAAAAA 1849621 29 82.8 37 A.......T..G...GA............ TGATAGTTAACCTGTTGTTTATATGAAGAAACATCTA 1849555 29 86.2 0 ........T......GA...........G | ========== ====== ====== ====== ============================= ==================================================================================================================== ================== 9 29 91.2 56 GTTGAACAGTAACATAGGATGTATTTAAA # Left flank : AAAAGGATATACAAAAGAAGCCGTAAATGCTTTAGTTGATTGGTGCTTTAGTGTGTCAGATATAAAGTATCTTATATTGTCTATTGATTGTGCAAATATCTCTTCTTGCCGCCTTGCGGAGAAATGTGACTTTGAATTATTTGAAAAAAGAACACCTATAGGACATAAGCAACCCAACATGGAAAGTGATAGTTACTTCTACTATAGAAAATATAGAAATCTGCCATAAATGTCATTATATTTATTACGCACTTTTCATATTTAACATCACAACTAAAAAAACGAACAATTTACTTAAGCACCGCATTATGCATGAATTGAATTTTTCCAGGTACAATAAATTTACAAACCTATTCAAGTTATTGAAACATAAGGGATAGAATAGGTTTTTATCATGTGTTTATGAAAAAATAAAATCACTTGGAAAACTTTCTTTAAAATCTTGTAAAATCAATATGTATATGATATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : TAGCGAACCCAAATTTGAAATTTGGTGTGAATCGCTTACTCCTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAATTCCTATGTAAATTATTAGATTAATTTTAAAAACCTGTCTATTTTTAGGACAGGTTTTTAGTATTTAAAGGGGATAGATAAAATAGTTTTTGAAGTTATGTAAATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAACTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAATATGAAAAAATCCCATATAGCCTTATTAGTGATAATGTATATGGTGTTAATGGGAAGTTTCCCTAGATTTACGGGATGGGCAACTATTTTTTCAGCAATTGCAGTGGGAGGTTATTTTTTAAAGAACAAAAAAGACTTAAAAGAACTAACTAGGAAGAAGAAAAACTTTATATTTACAGGTATAATAATT # Questionable array : NO Score: 3.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-1.93, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 1858840-1858612 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYU01000008.1 Clostridium botulinum B2 128 B2_128_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1858839 30 100.0 36 .............................. AATTACGAATTAATTTTTATATTAATCTTACCTTTA 1858773 30 100.0 35 .............................. AATACTGTACTCATAAAAAGTACACTCATATCAGT 1858708 30 100.0 37 .............................. CTTATTTTTACCCTAAGCTTGTCTTTAAGTCCCTCAA 1858641 30 80.0 0 ........A......GA......C....GC | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 95.0 36 GTTGAACAGTAACATAGGATGTATTTAAAT # Left flank : ATTGAATATCCTGTTGAACATTAACATAGGATGTATTTAAATAAATACGTACTCATAATATATTTACAATCTATATTTGTTGAACAGTAACATAGGATGTATTTAAATGAAGATAAAGAGTTAAGAATAGAAAATAAAATAAAGTAACATAAGATGTATTTAAATGAAGCCTGCTCTGCTGTTATTCTCCCATTATAGTTATTGAACATTAACATGAGATGTATTTAAGCAGGGAACCTAAATCTCCGATTTGGCGTGAGTCGCTTACTCCTTCGAAAATTGGAGAAGGAGTTTCATTAATGAGCATGGTATATATAATTAAGTTTTCCAAGTGAATTAAAAATAAAAACCTATTCTAGCTATTGAAACATAAGGCCTAGGGTAGGTTTTTGTTATGTGTTTTTGAAAAATCAAAATCACCTGGAAAAATTTCTTTAAAACATTGTAAAATCAATAGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAGAAATGCAATTATTTGATTTGGAATAATCATTTATATATGGCAATAATTTTTTGTTTAGTACTTCTTTGGATTAAGGTATGGGATTTTTATTGACTAAAATATTTTTGAAATTTAGTTTTAAGTTTAGGTTGTATTTTAGAGTGCTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGGGTCTATATAAATTGTTAGATACTAATTATTTGAAAATTTATTTAATGAATCATTATCCTTAAATAAGTTTTTTAAGCTCCCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTCTCTACATTAAATTTAATAACTTCAGCGTTTGGTATAAGAGATAATAATACCACAGCATTTTTTTCTAAAAGTTCTTCAACTTTGTTGTCCTTCCAAAATTTATTATAATTTTCTTCCCCTAGATTTTTATTTATATTATAGTTAACAGTTATTTCATATGGCTCT # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1859392-1859110 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUYU01000008.1 Clostridium botulinum B2 128 B2_128_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1859391 29 100.0 36 ............................. CATTATCTCCCTTACCTGCTTCTATTGAATATCCTG 1859326 29 100.0 37 ............................. AAATACGTACTCATAATATATTTACAATCTATATTTG 1859260 29 96.6 26 .......G..................... GAAGATAAAGAGTTAAGAATAGAAAA 1859205 29 82.8 36 .AA..T.G.......A............. GAAGCCTGCTCTGCTGTTATTCTCCCATTATAGTTA AA [1859197] 1859138 29 86.2 0 ..............GA...........GC | ========== ====== ====== ====== ============================= ===================================== ================== 5 29 93.1 34 TTGAACATTAACATAGGATGTATTTAAAT # Left flank : AAGGTCTTGTCTTAAATACAAATGGACAGGAATCAATCATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTCAAAAAGATTTGTATAATGAAGTTAGATTTGATATTCCAAATGCAAGATTAATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAGACCTTTGCAAAAAACTAGAATGGATTTATATCCATATCTAGTTTTTTTGTTTTTTATTGAAATTCTATAAGTATATGAGTGTTTGTTATGTACTACTTGTGTATATTTAAAGTTTTCCAAGTGAACTCAAATTCAAAACCTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGTGTTTTTGAAAAATCAAAATCACATGGAAAAATTTATATAAAACCTTGTAAAATCAATGTTTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGC # Right flank : AGGGAACCTAAATCTCCGATTTGGCGTGAGTCGCTTACTCCTTCGAAAATTGGAGAAGGAGTTTCATTAATGAGCATGGTATATATAATTAAGTTTTCCAAGTGAATTAAAAATAAAAACCTATTCTAGCTATTGAAACATAAGGCCTAGGGTAGGTTTTTGTTATGTGTTTTTGAAAAATCAAAATCACCTGGAAAAATTTCTTTAAAACATTGTAAAATCAATAGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAGGATGTATTTAAATAATTACGAATTAATTTTTATATTAATCTTACCTTTAGTTGAACAGTAACATAGGATGTATTTAAATAATACTGTACTCATAAAAAGTACACTCATATCAGTGTTGAACAGTAACATAGGATGTATTTAAATCTTATTTTTACCCTAAGCTTGTCTTTAAGTCCCTCAAGTTGAACAATAACATGAGATGTACTTAAGCAA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.06, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //