Array 1 39521-40037 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCTW01000180.1 Vibrio breoganii strain 10N.286.52.C12 10N.286.52.C12_contig_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 39521 36 100.0 32 .................................... CAGCGCGAGCGAAATAAAGGACAGTGAATACT 39589 36 100.0 32 .................................... TGACACTAAGGCATCTCCGTCAACATTGTTGA 39657 36 100.0 34 .................................... ACAATCTGATTAGCGATTTTGAAAATATCATCCT 39727 36 100.0 32 .................................... TGACGAAGTTCGTCAATTTCCAGTTGAGTTTC 39795 36 100.0 32 .................................... ACCAACCTGTGAAAAAGAGAACTATATATCTT 39863 36 100.0 33 .................................... CAATCTCAACACTTTAAAGAACGACCAATACAA 39932 36 100.0 34 .................................... CGGTATCATTTGTCCGTCATACGGTACAAAGACT 40002 36 94.4 0 ................................T..T | ========== ====== ====== ====== ==================================== ================================== ================== 8 36 99.3 33 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Left flank : GGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGAAAAAAATGCATCGCCTCGCTTGTGAATACGGAGTGCCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCGCAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATTAAGCATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAGCAACCAAGGCACCATTATATTCAATGTGATATTAAGAGCAGGTTAAGTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGGGGCTTGCT # Right flank : TTTTAAGGCACTAGAACCTAGGTTCCCCCCTTCTCAATCAAAGAATAAACCCATTAAGATAAGGCAATGCACTCCCTATCGTTATGCCAAAGACCAAGCCCCATATCACGCGAGTATTCTTCTCACCGTACATGTGTTGAATTTGGCTTTGAACTGCCTTGAGTTGGTGGTGGTGTTCGCACTTTTGCTGTTGCATCTCATCTATGAGCCTGTCGCGTGCTTTTAGCTCATATCGCAACGCCGAAATAGAACTGCTACAGCGACACTCTTTGGTGTACTGCTTTATGATTTGGAGTTGCGCATAACTTTCACAACCCTTGCCTGCTAGTACCTTATCTTGAGCAATCTTAGTCAACTTAAACAATTCATCGCTAGGCATTGAACCTTTATCCGGATGAAGCCTATTTGCCAAAAGCCTGTAGCTTCTTTTTATCTCCAGCTTTGTTGATGCATCGTTCGTGCCTAGAATTTGATGAAAAGTGCCCATATACCGTCCTTAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 12172-11860 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCTW01000391.1 Vibrio breoganii strain 10N.286.52.C12 10N.286.52.C12_contig_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 12171 37 100.0 33 ..................................... CCCACCTTGCGCCGGTATCATTTGTCCGTCAAT 12101 37 100.0 31 ..................................... TGAATGTGAAGAGCTTTCGCGATAAAGGTCG 12033 37 100.0 32 ..................................... ACTGGTGTGTAAGCTTCGAAAGCCACCACTCC 11964 37 97.3 31 ....................................C AAACTGAAATTATGGTCCACCGATTCCCACC 11896 37 94.6 0 ................................T...C | ========== ====== ====== ====== ===================================== ================================= ================== 5 37 98.4 32 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACT # Left flank : TCTTAAAGGGATTAAGACAGGCAATACCCCTCATCGGTTTCCACTGTCA # Right flank : AATCACCTTTAATACCCACAACAAGCGAACGTCTGAAACTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAAGTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGTCTGAATGGGTTTCTTTAGTTCTTTAATCTTAATGTTGTTTACTTCCTGGATTTTATAGTGCCCACCAAACCTACTACCTAACTCACCTTCGATAGCGCCATTCACTTCAGAGAGTAACCTTACCCACAGACTGTACTGCTTCTTATGGACCACCGACTGGCTTGTTAAACCGTCAATATCGAAAAGGTCTTGTGCCCCTTTTCTTTGAAATAGGAATATATCACCTTGATACCGCTCGTCGATTAAATCCAGCAAATGATCCTC # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //