Array 1 261789-263494 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHQK01000024.1 Bifidobacterium longum subsp. longum strain MCC10031 contig0024, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 261789 36 100.0 28 .................................... CTGAGATGCGCGCTGGAACACGCTCAGT 261853 36 100.0 28 .................................... AATGCGCTGAAATACGGGTTGGCCAACG 261917 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 261982 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 262046 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 262110 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 262174 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 262238 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 262302 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 262366 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 262430 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 262494 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 262559 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 262623 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 262687 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 262752 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 262816 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 262880 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 262944 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 263009 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 263074 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 263138 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 263203 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 263267 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 263331 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 263395 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 263459 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 27 36 99.5 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCGGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //