Array 1 5382-5806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATTN010000100.1 Campylobacter fetus subsp. venerealis strain NW_ME2 NODE_100_length_5828_cov_1.703912, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 5382 30 100.0 36 .............................. CCGTAAGCTACATTGTAAGCTAAGTCTTCAAAGACT 5448 30 100.0 36 .............................. TATAAAGGGACCTACGAACTAAGCTAGAACCCTTTT 5514 30 100.0 36 .............................. GTGTAAGCAAGATGGCAAGAGACTATCTCCTGTTGT 5580 30 100.0 35 .............................. CGGGGAGCAACGTTAGCAATCTCATTTCCGTCCAT 5645 30 100.0 36 .............................. TGGGGATTCGATGAAATTTTTAACTATATAGCATTC 5711 30 100.0 36 .............................. TTTTTATAAGGCTCATTTTTGAAGATATTATGCTGC 5777 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 100.0 36 GTTTGCTAATGACAATGTTTGTGTTGAAAC # Left flank : AATATAATTTTTTGTATAATCCAACTTCTATTTTATAGTTATTTATTACTCTAAGCCTAAATGGTGAAATTGGTAGACACGCTAGACTCAAAATCTGGTACGGGAAACCGTGTGTCGGTTCGAGTCCGACTTTGGGCACCAGGGGTTTTGTATATAACCCAACTCAATTTTAATGTTAGTTTTAATTTATAGCAATAATAATATTTATATACCACTAACTACAAATTTATATTTTATACTGCATTAAGCTTTTTCCAACCTAATTTTAGTTAAACTTTTAAAAACATAGATAAATAGTTTAAATTTAATGTTCCTATGATATTTAACTTATTATTGTTATTTTTTTAATTTAGATTGGAAAATAAATTTATTCTCATTATTTATAGCTATATTATATATATAACAAATAATCTATTTTTAATAGTTTTAGATAATATCTTTTAATTTATTTTTTATCTTAATTGCTTTTTTAAATTTACTTAGATGATGAGTTTATTATA # Right flank : TCCAGAGCTAATAAGGGATTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATGTTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 149-1100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATTN010000352.1 Campylobacter fetus subsp. venerealis strain NW_ME2 NODE_352_length_1152_cov_3.005854, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 149 30 100.0 36 .............................. TAAATTGTTTAAATGTAATAAATTAAAAGGAGGATG 215 30 100.0 36 .............................. AGAGCTATAGGCGAACTAGAATCAAATGGCATACTG 281 30 96.7 36 ....A......................... AAAAGAGATTGATGGAAGTGAGGTTAAAACAGTTCT 347 30 100.0 36 .............................. AAAAATGCATTGTAAAGAGCTTATAAGCCTTGCTTA 413 30 100.0 35 .............................. GGTGATTTTATATAACATTTTTGTTAAGTTGGATT 478 30 100.0 36 .............................. TTTTACTTTTTATTTAATTCCTGGTTTTTTTGGTGA 544 30 100.0 36 .............................. GTTATGTAAAGTAACCATAAAAGCTACCAACATACA 610 30 100.0 36 .............................. GAGCTAAAGGAATACAAAGAGGAGATAAAAGATGTA 676 30 100.0 36 .............................. CCAAGTCAAAAAAAATGGGAGTAATTCGGCTTTAAT 742 30 100.0 36 .............................. GATCCGTGTTCTAGTTATAGCGTCGTGCACTTCAAA 808 30 100.0 35 .............................. CCTTTCTGTTTTTTCATCAAATATATCGCAGAAGG 873 30 96.7 36 .......T...................... CGGAGAGAGCATGGCGCCAGAGGTAGATAACGGGGA 939 30 100.0 36 .............................. TAAAAATGCAAAGCTAATCAAGCAAAAAGTATCAAG 1005 30 100.0 36 .............................. TTTAAGCGGTATCAACCAGGATAACGAAATAGTTTA 1071 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 15 30 99.6 36 GTTTCAACACAAACATTGTCATTAGCAAAC # Left flank : CTTTACTCCGTATTTACTAGACTGATTTACTCTAGCTATGTTTTGAGCCTGACTTATAATGTGGTCGCTCACTCCTTCAAAATAGCTAGTATTTGCACTTAGTACGCCTTTAAACTTCTCTTTTAAGGTCTCTGCCATGTTTGCTCTTG # Right flank : GGTGATTTTATATAACATTTTTGTTAAGTTGGATTGTTTCAACACAAACATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACACAAACATTGTCATTAGCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //