Array 1 1723165-1718640 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019981.1 Pediococcus inopinatus strain DSM 20285 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1723164 36 100.0 30 .................................... CCATGCAATCTAATGATAGCCGAATTGAAC 1723098 36 100.0 30 .................................... GCCATAAGGTAAGTCTGCTAGAATCATGTC 1723032 36 100.0 30 .................................... CGCTAAACATTGTTGTTCTAACAAGGTTAT 1722966 36 100.0 30 .................................... AAACTGATAACGAGTTTTTTGCCTTTATGT 1722900 36 100.0 30 .................................... GAACACGTGAGTTAATCTTGAATATTCGTA 1722834 36 100.0 30 .................................... TCATGGACTTCGTCACTCGCATGTTTCATA 1722768 36 100.0 30 .................................... GAGTAATATTTTAGATGTACAAGCAAGTGA 1722702 36 100.0 30 .................................... TGATGCTGATTCCGTCAAGAACAGACACTA 1722636 36 100.0 30 .................................... TGGTTACTCACGATAAAAACGGATTGGGAA 1722570 36 100.0 30 .................................... CAATGATTGTGGCAAGCCATAAGCACCTGA 1722504 36 100.0 30 .................................... AGTATTTTATAATTATATCTATATTTCACG 1722438 36 100.0 30 .................................... CGTTCCATTAATTAGGTGCGCTCCAAAACT 1722372 36 100.0 30 .................................... CAGACTGCTGACTTAATTGCTAGCAAAGTA 1722306 36 100.0 30 .................................... CTTAATGCAATCGATGTAGAAAAGTTCCGG 1722240 36 100.0 30 .................................... TGCCACATGTTAGTATTACTATCAAAAGGC 1722174 36 100.0 30 .................................... GCAGACTCTTGGACTCTCACTCCAATCAGT 1722108 36 100.0 30 .................................... GAGTTTACTTTAGTGAACGCAGAGCGAAGT 1722042 36 100.0 30 .................................... ATCATAACGATCTGGTAAGAACGCAATCAC 1721976 36 100.0 30 .................................... ACATGTCGGATCGATGTCATCTTTCAGTAG 1721910 36 100.0 30 .................................... AGTTAGTAATAACTTTTCATCTTCATTTTT 1721844 36 100.0 30 .................................... CTTACGCAGGAGAATTGGCTAAAGGCAATG 1721778 36 100.0 30 .................................... TGCGGGGTGAGCTAGACGATCCACGCGGAT 1721712 36 100.0 30 .................................... CAGAGAAAAGGTATATTGTACCTTTGCAAA 1721646 36 100.0 30 .................................... GGTCTTTTTATATGGTCTAGTCTAAAGGGA 1721580 36 100.0 30 .................................... CTCAGTAATAACTGGAATGGCTCGGTTAAG 1721514 36 100.0 30 .................................... TCAGTACCAAAGTAAGGCTTATCTAAGTTC 1721448 36 100.0 30 .................................... AAACGAATCGGAACACTGACGGTCGATGGG 1721382 36 100.0 30 .................................... CCAACTATGGGTTTGACATGAACCGACAAA 1721316 36 100.0 30 .................................... ATACATATCTTCAATCTTTTCCAAGTCTGT 1721250 36 100.0 30 .................................... ACTTGTCTAACTTTGTCGCTATCCGTGTAT 1721184 36 100.0 30 .................................... AACAATGGATGACCAGTCACCAGTAAACTT 1721118 36 100.0 30 .................................... ATGTATGCGCGACCAGTGAAGCCAGTGAAA 1721052 36 100.0 30 .................................... TTAACTGGGCTGTAGTAATACGTATTGAGC 1720986 36 100.0 30 .................................... TGCACCAGCTATGGCTGAACAAGTGACTGA 1720920 36 100.0 30 .................................... TTAGTTTCAACTTTATTATGCGTCCTTCCC 1720854 36 100.0 30 .................................... TTCTTTTGTGAATTAGTTGACGCAGTATAT 1720788 36 100.0 30 .................................... AATAGCGATAACTCAACCACCAGAATTGAG 1720722 36 100.0 30 .................................... ACCGTCATTGTAGATGTAATTGATGATGTT 1720656 36 100.0 30 .................................... CAATGATAGGAATGATTTACCTAGTGTTTT 1720590 36 100.0 30 .................................... GCGTTGATTATTAACGATGATGAAATGACC 1720524 36 100.0 30 .................................... AAAACATAACATTGTCAAAGCAACCTTTGC 1720458 36 100.0 30 .................................... AGCTAGTTTGTACTTACTTGCCGAGGTTGA 1720392 36 100.0 30 .................................... GCCAGAAGAAATTGATATTGATGATGACAG 1720326 36 100.0 30 .................................... TTTTTAAACAATTTTTTGCGACAATCTGGC 1720260 36 100.0 30 .................................... TTAATATATTCGTCAGCCTTATTCAAATCT 1720194 36 100.0 30 .................................... CTCGTGGCTTTCTAGCTGGTCTAGGTCTAC 1720128 36 100.0 30 .................................... GTGATTCCAATCGCATTAGTGGTTGGATTA 1720062 36 100.0 30 .................................... TGGCAATTACGTATGCCTATACTAAAGATA 1719996 36 100.0 30 .................................... GCAACCTGGTGGCATGTGACTAAAGCAGAT 1719930 36 100.0 30 .................................... AACCAATGCATTCATAGCAGTTTGATTTTC 1719864 36 100.0 30 .................................... CCATAACCCTAGCTTCAGATAGTAAAGCTT 1719798 36 100.0 30 .................................... GTTTAATTGATTAGTTAAATCATTAACCTT 1719732 36 100.0 30 .................................... GGCACTAAATAGCCCAATACTGTATAGACG 1719666 36 100.0 30 .................................... GTAGCAGTGCTAAACCGCTTCTGTTCTGCC 1719600 36 100.0 30 .................................... GCTACTTGGTGGCATGTGACTAAGTCAGAT 1719534 36 100.0 30 .................................... CTTGTCTTTTGTTTTTCTCTACACTCATAT 1719468 36 100.0 30 .................................... GACCCAACGACTGGTCAAGTTACCGTTGCC 1719402 36 100.0 30 .................................... AGATTAAACTGATTGACAACGTCACCCTTT 1719336 36 100.0 30 .................................... TAGTGTCTGCAATAACGTGCTAGCCTTAGT 1719270 36 100.0 30 .................................... AGATTAAACTGATTGACAACGTCACCCTTT 1719204 36 100.0 30 .................................... TGCCTTATCAATTTCATCAGTCTTAACACC 1719138 36 100.0 30 .................................... CAGATACCGAACGCCAACATCCCAGGAACA 1719072 36 100.0 30 .................................... TTCGTAGTAGACCCAAATGGTGCGATAACG 1719006 36 100.0 30 .................................... AAATTGGAGTTGTGCTAAAACACTTAAACC 1718940 36 100.0 30 .................................... TACTCCCTTTCCTTATCTATATATATAGTA 1718874 36 100.0 30 .................................... GGTATCTGCCAATGATAGTCACATCAATAG 1718808 36 100.0 30 .................................... ATACTGGCAATGCAGAACGGTTTTTTGATA 1718742 36 100.0 30 .................................... TAAGTTTATTCCTGATGGTGTCGTTGTCTA 1718676 36 97.2 0 ..................................G. | T [1718644] ========== ====== ====== ====== ==================================== ============================== ================== 69 36 100.0 30 GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGATC # Left flank : AAGCTGACTTAAATAAAATGTTTCAAAGCCAGTTGCAAAAACAGATAGCCACAAAATTAGATGATGAGACCCGAATGAAATTGACTGAGATTAATAACCAATTGAAATCACTGATCTTTGATGCAACGTTTTCCTTGGATCTTCCGTTAAAAGTGGATAGTGAATTTGATCCAGCTAAGTTAGTTAAATACTGTGATGTTGGCTTTGTAAGTGCTTTAAATAGGGATCCATATGGTATAATAGAAACTGTATTAAAAACTGCTTCAGAATTAAAAGAGTCTAAAATATTAGTCTTAACTGGTGTACGAAATTATCTCAGTGTCAGCCAATTTAATGAATTGGTGAGGTTAATTAGTACCCTTGATTTGAACACTTTGTTTATTGAATTCTCAGAAATAGATAATCATGAAGAATTTGATGAATGCCGCTATTACTACGTTGATCAGGATTTTGTTGATTGGCGTTACTAATACTTATGAGAGTAGCATTGCAAAAAAACG # Right flank : GGACCACATGGGAAATGGATAGCATTTGAATTGAACTGCACTAAAGTATAAAAAATAATCAAGGAGCCTAAAACATGGAAGTCACAGTAAAAGAATTTTCCCAGCTATCCAACCTAGAATTGTTTCAAATCTACAAACTCCGTACCCAAGTTTTTGTAGTCGAACAATTATGTGCGTATCAAGAAGTTGACGACGCAGACTTGATTGCGCAACATTTACAAGTTTTAAATGAAGATCAGCAATTAGTGAGCTATTTACGAATAATTCCGGAAACGGACAAAACTATTGTTCATATTGGTCGTGTAGTTGTTGATCCGCGTTTCCGTAAACACGGATACGGTCGGCAATTAATTGTGAGTGGCCTACAAACTATTCAAAGAGATATGCCGCAGGTGACGACTGTGAAAATTCAGGCGCAGGCTTATCTGCAAACGTTCTATCAATCATTTGGTTTTAAGCCGGTGAGTGAGGTTTATCTAGACACGGGGATACCACATTTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //