Array 1 24626-22346 **** Predicted by CRISPRDetect 2.4 *** >NZ_QNUE01000022.1 Chryseobacterium flavum strain KCTC 12877 CONTIG22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 24625 47 100.0 30 ............................................... GTTAGTACAGACGAACAGGATTTGACCCGG 24548 47 100.0 30 ............................................... TCCAGCCACCTCTGTTAGCTGAATATAGTC 24471 47 100.0 30 ............................................... ATGGAAAGGTAATTACAGAGGAAGTATTGC 24394 47 100.0 30 ............................................... TCTTTAATTTCAACATTTACCCCTGCCATA 24317 47 100.0 30 ............................................... GTAGCACGAAGTATAACTATTTTCTTTGTG 24240 47 100.0 30 ............................................... GCGCCGTCGTCTTTGATATCCACAACGCCC 24163 47 100.0 30 ............................................... ACAATTCAGAGAATATATACTATTGATAGG 24086 47 100.0 30 ............................................... AACGCATGGTCATGGATGGTTACTGGTGAT 24009 47 100.0 30 ............................................... TAAATGGGTAAAGGACAAAGAAAAGTACGT 23932 47 100.0 30 ............................................... ATTAATAAAAATTTTATTGATAATAAAGCT 23855 47 100.0 30 ............................................... TTAATCCATCTCAGGTAGATGAAAACAATT 23778 47 100.0 30 ............................................... CGTACCCACTAACTCATAACCTTGCGAGTT 23701 47 100.0 30 ............................................... AACAAGCGATTGTCGCCGTCGAATTGTCTT 23624 47 100.0 30 ............................................... AACGGGGATTCAATGAACAAACAGACTTCT 23547 47 100.0 30 ............................................... CAACAGGAAGAAGATGTGCTAATTTAATGG 23470 47 100.0 30 ............................................... ATAAAAAGGTCTTAAATCCCTCGAATGGTT 23393 47 100.0 30 ............................................... GATTTAAGCTAATAAATCCTATCCATATAT 23316 47 100.0 30 ............................................... GAATTTCCCTTTAAGCCTGCTGTCATTCGC 23239 47 100.0 30 ............................................... AGTACTACATTAGAAAATTAGATTGATATG 23162 47 100.0 30 ............................................... TTTCGGGAGATAAAGCAGTTGAGAAAGAAT 23085 47 100.0 30 ............................................... CTGATATTTTAGAACCTGTGAAAAAGCTTA 23008 47 100.0 30 ............................................... TACATTTTCCTGATTTACAGAGGCGTAATA 22931 47 100.0 30 ............................................... CTAAAAGCCATTCTAAATTATCCACACCTA 22854 47 100.0 30 ............................................... GGGATGAGCTTAAGAATCACAGTATCCGGG 22777 47 100.0 30 ............................................... CTTTGTTCCGAAAAGTAGTTGACAATCCGT 22700 47 100.0 30 ............................................... CAGGGCTATTTAAAGGGAATCTTCCATCAG 22623 47 100.0 30 ............................................... AGCAAGAGCTTTAGCAGCGGCTTGATATGT 22546 47 100.0 30 ............................................... TAATACCTATATTAAAACGAAACAAGTTTA 22469 47 100.0 30 ............................................... GATGCTGCGATAAGTACCGCGTCTACGTTT 22392 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 100.0 30 GTTGTGAATTGCTTTCAAAATTTACTATCTTAGTGATTAGTCACAGC # Left flank : TTTTTCAGTTACTGAAGCAGGATCAACTTTAATAGAAGTCATATCGATGATAAAGTTTCCGGCAGCAACCTGTCCTCCTTCAATACTTAAATCTCCTGATTTTACATTAAGAGTTCCCCAACGAGGTGCAAAACCTCCTTTATGGAAAGCTTTCCAGTTCACTACGGAAGCTGTTGTATCTACTGCCAGTACTTCTCCTTTGCTTTCTGCTACAGCCTGTTCTGTTCCTACAGCTGTGGTGGATTTTTCTTTGTTACCGTTACATGATGCTGCAAGCAATCCTACGCCTACTAATGCAATTACGCTAATTTTTTTCATATTGAAATGTTTAAAAAAGTTTGTATTTTAAGATCCCAAAAGTAGAAAAACTTTATTTCTGAGACCTTAACATACATCAAGAAATGAAAAATTCCGGTTTTTATTGTGTGGTAGCTGTATATTTTCTGAAGAAGCTTTTTTGCATATTTATTATTTTCTGATTATGTGTCCTGGCCATTGTT # Right flank : CTCAAAAAATAATCTACTGATAACCAGTAGATTATTTTTATATTTAGAATTTAAAATTTAGAATAATTCAAGCTGCTGAAAGGTTGGAGGTGGCTCTTCTTTATTCCTGGCAAAGAAGATTTCAATATCTCCAAATTGTTTGTCTGTGATACACATAATGGCAACTTTCCCGGCCTTCGGAAGCATAAATTTCACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGACGTACATACATCGAAAACTGAAACAGCGTAAAACCATCATCAATAAGGGCCTTCCGAAATCGATTTGCATCTTTCATATTCGCTTTGGTCTCGGTCGGGAGATCATATAATACTAAAACCCACATAATCCGGTATGCATTAAACCTTTCGGAATTCATAACAGTTGAGGATAAGAGATCAGCCGTTTTTCTCCTGTGTAACATTTATAAAGCGACGAAGCTGTTATTTTTACAGCTACTAACAATGGTCTTGTTCTGTCATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTACTATCTTAGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //