Array 1 7369-5418 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYRO01000022.1 Streptococcus agalactiae strain GCH62 22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7368 36 100.0 30 .................................... AATTATTGTTTAAAAAATCTCAAGACAAGG 7302 36 100.0 30 .................................... ATCAGTTTGCAGTGGTTTACCTCCGACTTC 7236 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 7170 36 100.0 30 .................................... AAGGGTGTTAGATGATAATACCTTTTTTAA 7104 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 7038 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 6972 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 6906 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 6840 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 6774 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 6708 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 6642 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 6576 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 6510 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 6444 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 6378 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 6312 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 6246 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 6180 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 6114 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 6048 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 5982 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 5916 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 5850 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 5783 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 5716 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 5650 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 5585 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 5519 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 5453 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 30 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : AAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //