Array 1 69490-69141 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKQ01000019.1 Bacteroides salyersiae strain BIOML-A30 scaffold19_size210619, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================== =================================== ================== 69489 42 100.0 34 .......................................... CAACCATTGACGGTGTGGATGGTTTACCTGAGGA 69413 42 100.0 35 .......................................... CAACGATATATAAGCATTTTGGCGTTAAACTTCCA 69336 42 95.2 35 .............................A..G......... TAGCAAAATCACATCATCAATTTCTTCTTCCAAAG 69259 42 81.0 35 T....CT.G..A...A....A...........G......... CAACAAATACTTTTTCGATATTATGATCGGCAAAG 69182 42 83.3 0 ......TCG....C................A....T....T. | ========== ====== ====== ====== ========================================== =================================== ================== 5 42 91.9 35 CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Left flank : ACTGGCCCAGCAGAATACATCCTTTTCTCCTTGTATGTTGGGACCCGCACCTTTGGTATAATCCCAAACTTCAAGTACCAGATCAAAGAAAGGTTGTGGGGGCGTGTCCTGTGCCTTACAGAAAGAAGAGATAAGTAACGCTGTCATTAGTAGTAAATAATTTTTCTTCATACCATGTGTTTTTTAAGTTTATGATCTTTAATTTTTTTTGGAGCAATACAGATCGGGACTTCGTCTTTAAAGAGATGCTTTCTCTATATTACTTTATTATAAAGCGGATGAGAAGAAAAAAACCACTAATCTTTTTCCAATAATAATTTAGTTTGGGATTTAATTTAGCAAAAAAAGTACAAGATATTGATGCTCTTGGTAGTAATTAGAACTCTTTTTAAATTAAAAATCCCATTAACTAATGGGATTTTCTTGAAGAAACAGCATTTATTTTTATTTTCTAAATTTTATTGTAATCTTTTGAATTACAGTTTGTTGTTGGCATTGTA # Right flank : CAACTAAAAAATGGTGGTTATTAAAATAATATTTGTAATTTTGTAGTCCTAACCCTGTGGGGGAGTGAGACTTTAGCGGGTTATGTGATATTTGTATCGTTTAGCCGCTAATTTGTTTTCATACTTTTCCTAAAGCAAACTGCTGTCGTTGCTGAGGATAATCACGATTGTGTAGAGAGAGAATTCTAACTTAGTGCAAATGGAATTTGATATGAACTCAATGAAACATATTTGATTGATATATTGGTAAATAACCATTGTTAAAAAAAAGTGTTCATTAATGAATTGGGGCGTAAATTATAACATTTTACATCTTACTTATCTATCTTCCTTTTTTAACATTGTTAATTGCATTTCTCATATATACTTTCCTGCTTAACAAGAAGCGTATTTCTTGTATATAAAGAACGTATCCTTTGTCGACAAGAAATACGATTTAACGCAGCGTTAACATGGCTTTCTTTCGTGTATAAACAACGGCTCTTTGATCTCAGGAAATT # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTCTAATGTTGCAAATGTACTAATTTGAAAGCGAATCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 151311-151536 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKQ01000005.1 Bacteroides salyersiae strain BIOML-A30 scaffold5_size380655, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 151311 30 100.0 35 .............................. TACAGCAGCGCTGGGTTTAGTCCTGCTGCTTCAAG 151376 30 100.0 35 .............................. AGGAAAAATTCACAAGACACAGAGCCTACAAACTC 151441 30 100.0 36 .............................. GTTGATCCGCTATTGTTTTTAGATATAGTCATACTC 151507 30 73.3 0 .T...............A......AATTTG | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 93.3 36 GGCTTAATTGTACCGTTGTGGAATTGAAAC # Left flank : GTGAAGCAGAAGTAAAAGAAGGGAAACGTCATGGACGTTATCGCGAATATTATGAAAATGGAAAACTGAAACTTCGCGGGAAATATGCCAATAACTTACCTAAAGGTACATGGAAGTATTATACGGACGAGGGAGAGTTTGAACGCAAAGAGAAATATTAATTGTTATATTGGGTTTTGATATAGTTTTATTAAATAGAAAGCCTCTGATTGATCAGATGAAAATGTATGCTTATGTATTACTTATTTTTTTCTTAAGAAATAAAATTATGTCAGAATTTTATTTGTAATTTAGTTGTCGATAATCGTTTGTATAGTCTGATTAATCTGGATTGATATATAAATTTTTCTTTGAAATGTTGATATACAGTGAAATAGCTATTGTGTCGATGTTCCATGCTTTTTATACGATTAGCCATCGACATAATTGATGTTATAAAATGGTGTTTTTATTGGATAACTTGCTTATTATTAGATATCTTTTTTGAATATTTAATGTGG # Right flank : GAGATTATCCTTATGTGTAATCTTTTGCTATCTATGTTACTACTTTTTTATTTGTTAAAAAATACAAGAAGAAAACGCGCAATTATATTCTTTTATATCATTTAACATCAGATAATTAACCTAATTTCTATTTTTGAGACCCCAATTCGACAATTCATATTTAATTATTAACCTATATATTTTATATGACTATGCGAACTAATTATTTATTATTTTTAGTAATCATGTTGGGAATATTTCCCTTGAGTCACACACAAGCATCCGATTCTATTTCAAACAATGTAGTACTTTATTCTCCTTACACGAAAATCTCAGTATCGCCCGGAGAAAGTATTAACTACAGTATCGATTTAATAAATAATGGTAGTGAGATTTATAATGAGAATATCTCATTGAGTGGATTGCCGTCCAGTTGGAAATACGATATAAAATCCGGTAGTTGGAATATCAAACAATTAGCTGTACTGCCCAATGAAAAAAAGAATTTCAGTTTAACGGTG # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 165253-166723 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKQ01000005.1 Bacteroides salyersiae strain BIOML-A30 scaffold5_size380655, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 165253 30 100.0 35 .............................. ATTGGGAGAAAGATTTTTTAACCACTGCCGTTCAG 165318 30 100.0 35 .............................. TGTTTAATATTTATATGTTATGAAAGAAAAAAAAA 165383 30 100.0 35 .............................. AAGCTAATCAAGCCGTGGGATCGCAACACGGGAGA 165448 30 100.0 35 .............................. AGTGGAGGATCACCACAAGCGATAAAATCACAAAT 165513 30 100.0 37 .............................. ACAAAATCGCGGTAATCCTTCCACAAGGCACGCAAAG 165580 30 100.0 37 .............................. GAGTAGACACACAACTCGCACAATCATTGATCGACCT 165647 30 100.0 34 .............................. TGGAAGTCAATCAAAAAGCGATCAGCGCAAAAAG 165711 30 100.0 34 .............................. AATATGAACGCAGGCTTCAAAAACAAAGAAGGGG 165775 30 100.0 35 .............................. TGGCTGCTTGTGCAATGTCCCATCTGTCTGTTCGG 165840 30 100.0 37 .............................. AACTCCACTTAAAGAGAGGAATTCATAAACAACTAAT 165907 30 100.0 34 .............................. ATCGTTGGATGTGTTAGTACGTTTGGTTGTAAGT 165971 30 100.0 34 .............................. AACCTTCTATTTCGTACTGTCTTGACAAGATCAT 166035 30 100.0 38 .............................. TGTTATATTTGCAAAGTAATCAAATCTATTATTCACTT 166103 30 100.0 35 .............................. TTAACAGAGTACTACGAATTCAATGGATACACTCC 166168 30 100.0 36 .............................. GTGGTAATCTTGCAGGTGCTTCCCCCCAATTGAATG 166234 30 100.0 36 .............................. ACTTTTGAAGTCAAGGTATTGCGGTTTGTGTACGAT 166300 30 100.0 34 .............................. GATTGGCGCGGTCGCTTTCGATGATTTGGCCATG 166364 30 100.0 38 .............................. TGTCAGAAGCATCAACCGTTCCATCACCTGTAATCTTG 166432 30 100.0 37 .............................. CTGTTTCTTACGCTTACCTATAATAATGAACATCTCC 166499 30 100.0 34 .............................. TGAAGATGATCCTGTGCGGTACGATTGTCTCCGG 166563 30 100.0 36 .............................. AATTGACCTAAGGTTATAAATATACCTAGTAATGTA 166629 30 96.7 35 .................A............ TAATAATTGGCAGCAGTACCCATTGCACAGGCATC 166694 30 86.7 0 ............T....A..A.......T. | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.3 36 GTATTAATTGTACCGTTGTGGAATTGAAAC # Left flank : CCTTTAAAATGTATTGGTAAAATATGTATGTCATTTTGGTTTATGATTTTGGCGAAAGACGAGTTGCAAAGATGCTGAAGCTATGTCGTAAGTATTTGAATTGGATACAAAATTCCGTATTTGAGGGGGAAATATCAGAAGTACGATTAAAGGAAATGTTATCTGCTGCAAAGGCTTTCATGAAGGAAGATGAAGATAGTATTATTGTTTTTAAAGGTTCCTCACAATGTTCTTTGGAGAAGAAAATTATCGGGAAAGAACGGTGTAGTATCGACAATTTTTTATAATTTAGTTGTCGATAATTGTTTTTATTGTCTTTGCAATAAGGCTCTACGTTGTAGATCGTTCTTTGACGTGTTGATATACAGTGAAATAGCTGCTATGTCGATGTCCGGCATTTTTTATGTTATTATCCATCGACATAATTAATCATATAAAAAGCATATTTGTTATTTGCTAACTCACTCATTTTTAATTGTTTTTTTTGAGTGTTTGTTAGA # Right flank : CATGTGAACCGTAATTTTGTTGGAACAGAGTGTTGTATGTTAATAGCACTACCATGAAATGAGATTTTATAGATTACTAAATGAAAGGGTGATCTACGTCACATTGTGAGCGCTTTAAATACCGGTTCTGCCTTTTGTATTTCTGATTCAAATCCAAACCAGTATCCTGCTTGTCCTTCTTGATTGGCGGGCAGGAAACATAAGCGTAATGTCTCTTTGTACTTGCCATAAATGGTTATCCACGTTTCGGGAGGGATTTGTCGTTTCGTTTTTACTTTTTCTGCCGGAAGTTTCTTTAGTGACATGCCCGCTTCTATCCAAGCAATGCTGACCTGTGTCTGATAGGCCGGATAATTTTGCTTACAGAATTCATACAAAATCAATCCTCTTTTTTCCAAGCTCAGTGGTTGGTCTATCAAGCCGATTTGCATAAGGTGATCCAGAAAATGATGCAAGAAATGTTCGTTTTCCAACATCAGTGTCCGAGTGATGTTTTGCCA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACCGTTGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 320829-323488 **** Predicted by CRISPRDetect 2.4 *** >NZ_WCKQ01000005.1 Bacteroides salyersiae strain BIOML-A30 scaffold5_size380655, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================= ================== 320829 35 100.0 34 ................................... ATTGTTGATCATTTGAGTGAGGAATTGTCTGCAT 320898 35 100.0 40 ................................... GCTTTAATTGGTGCATTTGTCGGCGTTTGCTGCAATGTAT 320973 35 100.0 38 ................................... GCAATAGTAAGTGTTTTTGTCTTCTGTGCTCTCTTTCT 321046 35 100.0 34 ................................... AAGTATATCTTTGCCCGGGCTCGTGAAAGCTTTG 321115 35 100.0 39 ................................... AAAACTTTATACAAAGTGGGAAAGTGTAGGATGTATAGA 321189 35 100.0 35 ................................... ACAAAACGTTCAAAATTCTAAATAACGACCACCAT 321259 35 100.0 45 ................................... CTAAAGCAGAAATGCTGATAAAGGGAAATACCCAGCTGTCAAAGA 321339 35 100.0 34 ................................... CTTATCATCGTTGGCGTTTGCTCTATGCAGGCCC 321408 35 100.0 36 ................................... AGTGTTACTGCCTTTCAGCCGGTATGCCTATTGGTA 321479 35 100.0 36 ................................... AAATATGGCGCTGTCATCGGCTTGGAGAAACGCTTC 321550 35 100.0 36 ................................... ATAACTGGAGCACCAGAAGAAGGCATTGACCAAACA 321621 35 100.0 36 ................................... CTTCTATGGCGACCCCAAGTACAACGGTACCAAGGT 321692 35 100.0 37 ................................... AATACCTCGCGAAGGTAGCTCTGTTCATCCATGAGGA 321764 35 100.0 34 ................................... TATGAGCATTTTGCCACGCCGCAAAGGTATAAAA 321833 35 100.0 33 ................................... ACTGTTCTCATGATTATAGCGATGCCTTTGCAT 321901 35 100.0 33 ................................... CATCAAAGAAAACATATTGCATCTATCAAAGGA 321969 35 100.0 37 ................................... CTCAAGAGTATAAAGCTCGTGAGGTTCACTCCAGCGA 322041 35 100.0 32 ................................... GAAAGACAATGCCAAACTTGCTATATTTGCAA 322108 35 100.0 34 ................................... ATTGTGGTTACATTCCTGCGATGATGAATTTGGG 322177 35 100.0 36 ................................... CCAGCCGTAGCGCCTTTATTTGAAATTGCCGAACCC 322248 35 100.0 35 ................................... GTTTGTACCTTGGTGCCGAAGGCGGTTACGCATTC 322318 35 100.0 36 ................................... TTTTCTCCTGGGCATGGGAAACAGCCGGCAAATACT 322389 35 100.0 37 ................................... GGTTTCTGGGGTGGCTATGCCAACCAGGATGAAGTCT 322461 35 100.0 33 ................................... TCATGAAGAGGCATTTGAAATTCCTTTTGTAGG 322529 35 100.0 38 ................................... TTTTTCAGCGGAAATAACCGAAGCATTAGCAGCCGGAA 322602 35 100.0 36 ................................... AGTAAAGTGGGAAGAAGTTGTAAAAGCTCGTATGGG 322673 35 100.0 38 ................................... TTGAGGGTTGCTGCTGGTCCTCTATCGAGTATAATAGT 322746 35 100.0 37 ................................... AAAAGTATGAAGACAATGAGAAATTTCGCAGCTGCGA 322818 35 100.0 35 ................................... ACAGTAGCCATCAACATAGATCACTTAGTAAGTGT 322888 35 100.0 33 ................................... GATTATAGGCTCTGTCAATGAGGATCCATCACT 322956 35 100.0 35 ................................... AACAGCGTTCGAAATATTGCGCCTTTCCACACTGT 323026 35 100.0 37 ................................... AAATCTCTTGAAAGAATACATTGACATATGTCTAAGA 323098 35 100.0 35 ................................... TAGACAGTGTATAACAAAATCAATATATCATGAAA 323168 35 100.0 35 ................................... ATACATTCGAAAACTTTATATAAAATGGGAGAGTG 323238 35 100.0 37 ................................... TATATTTATAACCGCTGCAGAAGCATTTGCCAAACGA 323310 35 100.0 36 ................................... TCACCTATTATGATGTTTGCTTTCGTGGCTTAAATT 323381 35 100.0 38 ................................... TTATTTATTATTTGTATGGTAATTTCTGCTTTTGCCAA 323454 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================= ================== 38 35 100.0 36 GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Left flank : GTGCCGGTTGATATATGATTTTTGTATAACAATTGACGCAAATCGGATAGTATATGACTGTATCGGAGCGTTTATCCAATATTTTTTTTATTTTCTCTTGCACTTGTAATAGTTGGATATCGGTAAACATACATTCGAATACACTGAAATTGACTCTTATTCCATATTTTTCCAGAATTTTAGAGACGCGTGCTCTTTTCCGGTCTTCTTTAATATCGTATGCTACGACACAGAATGTCTTTTTTGCTCTTGCCATTTGGTGTTGCGTATTTGGAGGTAAATATAATGAAAATGCGGGATATGTGGTATTGGAAAAGAAAAATTTTGAGGTTAAAATGGGGTAATATTATTAGAGTGAATTAAAGGTGTATGGATGTATCATTGTTTCTGAATTCGGGATAATGAGATATAAATGATTTTAGAGAGTTGCTTGTCTTAATATTCTACTGGAAGTAACTCAAATACGGGATCTGGGTTGTGACATGGCGTAACGGAGAAAA # Right flank : TACTCTGATTATCAATAATTTATTTTTTACTCTTTGTTTTGTATATTTCTCATAAAGTATTGTTATTTAATACAATACGCTATATTCCAATAACTTTTTCGCAAATGTATGTATTATTTTTAAGAAAATCAATAATTTGTTTGGCTAATATAGGCTTATCTGCTTAAAAATAAGATATTTACATTGAATATCTATTTTCGCAAATGATTTTGATTTTCTTTAAAAAAAATCATTTTCGAAAAACAGCATAGAGGTATTATACAATATATTATTGATTATAAATGCAATACGTCAAAGATCACTTGTATAGTAATGATTCATTTTCGCAAATGATTTACTTTGTTGCTAACATGTATTTTGTTGCGAATGTGATTTAAGTAATACAATTTATCTAAAAAATATAATATCAAATAAATCAGATAATTATCTTTTTATCGTTTTTCGCAAGAGTTTGGCCTTTTTTCATGTTTTGTTCACTTCATCTCACCACTTGGCTACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTCTACTGGAAGTAACTCAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //