Array 1 1259-1586 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VIOR01000072.1 Vibrio cholerae strain A12JL36W91 NODE_91_length_3183_cov_19.892241, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      1259	    28	 100.0	    32	............................	TATATTAACAACCAGCTAATTTTCTCGGATAT	
      1319	    28	 100.0	    32	............................	CTCAGTTTTTGCGCCAAGCAGGTAAGGAACAA	
      1379	    28	 100.0	    32	............................	AAACTTGGCAACACGAAAAGAATTAAAAAAAC	
      1439	    28	 100.0	    32	............................	ATAAGGCGCGATTTAGCTAGGCGCAGACGGTT	
      1499	    28	 100.0	    32	............................	TTAAGCCCGTTCACATTGTCCCAATGAGCGTA	
      1559	    28	  96.4	     0	........................A...	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	  99.4	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   AAAAGTTTAAGAAAGTAATTGATGAATCTCTGGATGTATATAAACCATTATTAAACAAAGAGTTGATTGAGGCTATTGAAGCCTTTCAAAAAGAAGATCGAGAAATTGTTGTAGCAGTTGAGAATGATGCAATGAGTGTTTTCGAGGCTTATGATGCATTGCATGCAGAGCAAAAAAAACTACATTCGACAGTAAGTGATTTCATAAAAAAAGTGTCTGCTATTTAGCGCATAACAAACGCCTCAAGAGGGACTGTCAACGCGCGGCGTTTCCAGTCCCAATGAGCCGAAGTGGTTACAGTTGTTGTGTTTGAGTTTGGTGTTATGCGTTGCCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAAATAAAAAGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA
# Right flank :  ATATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGTGGTGGTTTCGGTTGTTGTGTTTGAGTTTTGTGGTAGTGCGTGGCCAGCCCCTTAGGCGGGCGTTAGGTTTAAGGTTGTTCATGGAAATCAAAGAGTTTAGTGACTGTAATCTCGAATCGTTGAGAAAGCTCTACTTGGACTCTAGACGAGATAATTTCCCATGGCTCAAGGCGGATAGTTTTCGGATAGAAGACTTCGACCGCGATAGTCAAGGTGAACGAATTTGGTTGTCTGAGGTTTTAGGGAATGTTGCCGGCTTCATTTCCATTTGGGAGCCTGACAATTTTATTCATCATCTCTATGTCGCAACCGAATATCAGGGCCAAGGTGTGGGCTTGATGCTGCTTAACGGCGCAAAAATGAAATATGGCAACTTAAGCCTTAAGTGCATGGTTCAAAATCAAAAAGC

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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