Array 1 126952-127278 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJAO01000006.1 Serratia marcescens strain MSU97 contig00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 126952 28 96.4 32 ..G......................... TGCACCCAGAATCAGTCAGTCTTTTGAACCAG 127012 28 100.0 32 ............................ TGATTTGGTTGTTGTAGCGCTCATGGGACATA 127072 28 100.0 32 ............................ AACGCCAATCCCATCAGCAGAGGGGCGATTAA 127132 28 100.0 32 ............................ AGAGGCGATTTTACGGCTGGCGCAGGCTGTCA 127192 28 100.0 32 ............................ GGCGATGCCGGTGCCGCTCTCACTGTTCGCCG 127252 27 85.7 0 ..G..........C......-..T.... | ========== ====== ====== ====== ============================ ================================ ================== 6 28 97.0 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TCCGGCCTACTACGGCCGCTTCGGCTTTAAACCGGCCGCCGCCTATGGCTTGAACTGCCGCTGGCCGAACACGGAAAACGCATTCCAGGTGTATCCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATCGCTTTTAACGATCGGCAATAGATACTCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGAGCTGACAACTCAGCTCTTCTGTGGTGTCTATGCGTCTCAGTGAGACGGATGGAGATACCAAACAGAGAACCAATAATTCCCCCCTAAAAATGCAGGAATCTCACCTTACTTCGTTAGTGGTTGTCGAACCCTTTTTTGAGTGTCATTTTTAATTGATTGATTTAAAGTCATATTTTTAAGCGCTTTAAAAAAGGCTTTTTGAACGGGTATTTCGATTTTCCTAAATTAATCAGCTGATTAGCGCTAAGATTCAACG # Right flank : ATATAGAGGAAAAATCTTTACTAGGATGCATTAATGGTGAAGCAAATACTCCAACGACAGCGGCGGGTGGTTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCTACTTGGCAGTGAAATACCAGCGTCAGTTCCCCTTTGCCGCGCAGCGCCTTGGCACCTTTGCCAGCCTGATGCTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCACGCCGCTCGGTAAACGCAGCATGTAGAGGTGCCAGGGAGTGGGAGAGGTGTTGGTCATCGTACGCCGTTTCGGTGGCCAGGGTCGGCGTATGATGGCATGTTCACCATCACAATCCCATCCCCGGCCGCCGGTGCCTTACCGCCTTACCCCTTTTTTCCCGCCAGTTCGAAGCGTGGCGAGACGATGCCGTACAGCGTCCAGCCGAGGAAGGTGGCGATGGCGCCCCACATCAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //