Array 1 266503-266793 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFE01000004.1 Clostridium sporogenes strain AFW AFW_contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 266503 29 100.0 37 ............................. AGAGTTATTACATGATAGTGATTTTGAATTTATTGGA 266569 29 100.0 36 ............................. TTTACAATCATTTGATGCACTGTTAAAGGCAAGTTG 266634 29 100.0 35 ............................. GGAACAGCAGTGTGGTTATTTAATAAAGATGGTGG 266698 29 100.0 38 ............................. CTGATATTTTAAAAGAAATCGAAGAAAAAAAGAGTGCG 266765 29 93.1 0 ...........................GC | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 98.6 37 TTGAACAGTAACATAGGATGTATTTAAAT # Left flank : AGCAGATATTATGGCTAATTTCGCAGAATCGTTAGGTATTCCAAATAGTTGTTTGATTAAAGAGAATAAATCAAGAAACACATATCAAAATATACAAAATTCAATAAAGATAATGGAAGATAAAAATTGGTCATCAGCAATGGTAGTAACTTCTCCCTGGCATTTAAGACGTTCTAACTATTTTTTAGCAAAATTTAATATTACATGTCAAATGGAGAAATCTGACTATCCAAGAGAATTTTCTTATCTTTATATTATTGCTATATATATGTGGGAAAATTATGTAATGACCAAAACTAAAATAAAAAGACACTAATACTATTTTTCCAGGTGAAATAAACTTACAAACTTATTCAAGCTATTGAAACATAAGGGATAGAATAGTTTTTTATTATACGTTTATGAAAAAACAAAATCACTTGGAAAATTATCTATAAAACCTTGTAAAATCAATAGTTGTATGATATTCTTAAAAACAAAGAATGGCTATTTTACTATGG # Right flank : CAGGGAATCCAAATTTGTAATTTGGTGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTCATTAAATAATAATTAGACATTTAGTATTTTAAGTTTAGATATGATATGAAAAGGTTAACAATAACATGAAAAGTATATTTTTAGAATAATATATGAAAAATGAGTAAAAATAAAAACAAGGTTCAAAAACTTTTTCCAAGCAATTTTAACTTTAAAACCTATCTTAAGCATTGAAATATAATGCTTAAGATAGGTTTTTGTTTTGTAAATACTGTTTTATGTTATTATTTATCTAATTCATCTAGAGACATTAGTTTTAATAATCCATTTCGTAATAAAATTAGAATTACACCAAATACTATTACAATGCCAGATATCAAGCCAAATATTTGAGTATATCCTAGAGTATCTGTAAATCCTGCAAGTTTTCCTGAAATTATGCTTGAAAAGAAGAAGCTTAAGTACCATGCACCCATTGCTAGGGAGCCGTATTT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACAGTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 70521-71334 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTFE01000005.1 Clostridium sporogenes strain AFW AFW_contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 70521 24 100.0 44 ........................ GAAATTTATCATACAAAGAATTGTAATATCTTTGAAGATGCATG 70589 24 100.0 42 ........................ GAAATAAAGAAGTACCAAAATCGCTATAATAAAATAATTTGT 70655 24 100.0 41 ........................ GAAATCTAACATAGTTATATTTTGGGCTTTCAGCATCTTTA 70720 24 100.0 43 ........................ GAAATAATATATCTTTCTATTATTTTTACTTTCGATTCTCTAG 70787 24 100.0 42 ........................ GAAATCAAGTTTTCATTTCCAATTCTGTCATGGTTTTTGCCT 70853 24 95.8 42 A....................... GAAATTTTTAAACTTCAAATATATCTTTTATTTCATACTCAC 70919 24 95.8 41 ................G....... GAAAATTACAAGAATTTTTATTTGTTGTAAAATTAAAATAA 70984 24 91.7 43 .........C.....C........ AAAATTTACTTAATTTAGGTTTTATGTTGACCTTACCGGATTT 71051 24 91.7 40 ............T........C.. AGGATATATTAAACATCAACCAATTTTGAGCTTGCACTGT 71115 24 100.0 41 ........................ AAAATAAATTTTCTATGTTCACTATTTTCCCAGCATGTTCA 71180 24 95.8 41 .......................C GAGATATTACATATGTAGCAAATGCTACAGCAACAAAGATT 71245 24 95.8 42 ...............C........ AGAATGCGCTTGCAGCTCTAAGTAAACATTTCTAAGTCTTAC 71311 24 91.7 0 A.............G......... | ========== ====== ====== ====== ======================== ============================================ ================== 13 24 96.8 42 GTTTTATAGTTCCTATAAGGAAGT # Left flank : TAAAGAGTTTTTAATCAGTATAAAGAATAATATAATAGCAAAATACAATTCATTTTATAATGAAGAATATAAAGGAATTTTAAATATAAGTATATTAGATGCAAACAATATAAGAAAGAAAATAGATAAATATAAGAAGTGGATATATGAAGGATATTTAGGTGGTTTTATAATAGAGGGAGATACTGAGATAGTAGAACTTGCTTATAGCTGTGGATTAGGTAGCAAAAATTCTCAAGGCTTTGGATGTATTGAGACATTTAAAGATCTTAATGGTATTAAAAATTATAGCAGAATAGTTTAAATTTAAATATTTTGCAGCGAGCTAACTTTTTTATTATATGTATATAAAGTATTGATTTAACTGAATTTTTTAAAGATTAAGTGGGTTTTATAAAAACATTACTGAAGGTTTACTGCAAAATCCATAGATTTAGGTGATTCTTAACATTGTTAAAAACAAGATGTAGCCTTATTTTATGGTAATTTTGAAATTGGGG # Right flank : TTAAGTAATTTTAATAATATTTAATTATTTGTATTATTTTTTATTGGGGGGAAATTTTTAATCTAACATAGTTTAAAATTTACTATAACAAATAAATACTATTAAATCCTTTATAAGTAAGTTTAAAAAGAATTGTTATTTGGTATAATGTATATAAGCGTAATTACTAATTAGTAACCTTAATTGATAATTAAGTATTGAGAATTAAACATATGTTAAGGAGGTGATAATATGGAGTTTGATATTTATACATTAGTAGAAAATGATGAAATAGAGTGTAAAGAGGCTTTAGGTGGATTACCTAAAGATTTATGGGAGACTTATTCAGCTTTCGCCAATTCTAATGGAGGAACACTTTTTTTAGGAATAAAAGAAAAGTCAGCGAAATTCTTTTTTACAGGAGTTAAGGATGAAGAGAACATAATTAAAGATTTATGGGACAATTTAAATAATCCTAAAAAGGTAAGTGCAAACATATTAGGTAATAATTCAATAGAGAT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATAGTTCCTATAAGGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //