Array 1 638577-640016 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045798.1 Thermoanaerosceptrum fracticalcis strain DRI-13 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 638577 37 100.0 38 ..................................... GAAAATGTATTTGCAGAAGAAGAAAACTTAAAATCTGT 638652 37 100.0 38 ..................................... GTCAAGAACGTACCAGGAGAAATACTCACAGACCACCT 638727 37 100.0 37 ..................................... GCTCATAAAATCTCTGAATTTATCTTCTTTATCTTGA 638801 37 100.0 36 ..................................... CTGGTCGCTCTTGTGGGGTACAATATGGTCAACCAC 638874 37 100.0 38 ..................................... TTTCCGACTACCTTCGCGCTGTGCTGCTGCCAGTCTAT 638949 37 100.0 38 ..................................... ATATGATGGCATATAAACTAAACCGGTCCGGATTTTTG 639024 37 100.0 38 ..................................... GTTGGTTTATCCAGTCAAACCATTGCCGGTTACGTTTA 639099 37 100.0 36 ..................................... AAAGCGATATTGGAGTTGGAGATGCCGGAGAGTTGC 639172 37 100.0 38 ..................................... ATTTGTTTCGTTTTGCAGTTCTACAGCCTCATGGATAA 639247 37 100.0 36 ..................................... AATCAAACGGACAGGAGGTAAGCTGGGATGAAGAAT 639320 37 100.0 38 ..................................... GATATAAGAACCCGTAATCGAGGAATGTGAACGTTCGC 639395 37 100.0 37 ..................................... GACTAGAGGGTAGTGACAGGGGTAAATTAAGATATGC 639469 37 97.3 39 .....................A............... TGATATGGTGTAAGTCTGTAATCCCATACCCACACTTTA 639545 37 100.0 39 ..................................... GGCCGATGATAACTGCCAATGAACGTTCATTCCAGAATT 639621 37 97.3 41 ........A............................ AAAATAATAACTCTAAGCATCAAATCTCAGTTTCTAGAGCA 639699 37 78.4 38 ....T.G...T........GA...G.T.A........ GAAGCAAGATCGACATCACCAGTATGTACCAGCTTTAG 639774 37 81.1 35 ........A.TC.......GA...A...T........ ATTAGTTCTGTGGTCTCCTTTTTTTTCGGTTGTAA 639846 37 73.0 38 .C.A....A.TC.......GA...A.T.C........ TTATAACCACATAGTCCAGGCTGCCCTATACAATTCCC 639921 37 73.0 22 ...A....A.TG........A...GGTGA........ CCACTCCCTTGCCAGGAGCCGA Deletion [639980] 639980 36 83.8 0 TCG...................C..C..-........ | T [639982] ========== ====== ====== ====== ===================================== ========================================= ================== 20 37 94.2 37 GTTGCAATGCCTAGCTCAGAGGTTTAAAGACTGAGAC # Left flank : CAGGAAAATTTGCGGGATCAGGTTCTTCGCAGAAGGAAAGAAATATACAGGATATTTGCGGCCAAAATAACCAGGAAGTACAAAACCATAGTCCTGGAAGAATTCACGCTGAACAAAACGGTTCAGAAACCCAACCCCGAAGAAGGCCCGGCAGGAACATTGCCTGCAAACAGGAACAGGTTTATAGCGGCAATATCCGAATTCAGGAACGAATTGGCCAATGCTTGTCGGAAAAATCATGTGGAATTCACATATGTGCCTGCTGAAAATACAACAATAACCTGTCATAAATGCGGGCACAAGGAAAAATTCGATGCGGCGGCTCAGATAATACATACATGCAGCACATGCGGGGAACTATGGGACCAGGATTACAACGCAGCGAAAAACCTGTTGGCTTTTTCGCAAAAGGGCGGGGTAAAATAAGCGGTATTTGTATTTGCGAGAAAAAACAAAACAAAAAAACCGGAAACACAGGCAAAACAAGGTTTGTGTTTCCG # Right flank : CTTGAACTCGCAGCCTATAGTTGAGGATCATGCCGCCGCATCCTCTCCATTTTAACGGCCGATAAAGTCAAGCCCTTGCAACAGGTTTATAAAAGTGTTATAATAAACACGTAATATGTTTTTTATCGCATACCGCCTGCTTGCGGAGAGCGAGTGTATTGTTTAGAGTAATTTTTTTATTTTAAGATTTCGAAAAAAGAAGAATTTTAAAAGCCTATTTTAGCCAAAAAAGGGTAAAATAGGCTTTTTTATTTTCCCTTGCAGCAAACGCCCAAAACCAACGGGCGTTCAAATAAAAAATCTAAAACGAGGAGGTGAAACCCGGCTTAAGGCCGGGGCAATTCATGTCAATCAATGTTCCCCAAGAACAAAACGTGGCGGCAACCCTTCACCCTCAGCAACTGCCAATGGAAGTATCGCCGTCAAAACTGGTGGCAATGCTGTCACCAGAGGACAAAAAAACAATCATGAGTCTGTGTATGCCCAAAAACGCCACGGAC # Questionable array : NO Score: 2.94 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATGCCTAGCTCAGAGGTTTAAAGACTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-44] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 1399132-1393508 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045798.1 Thermoanaerosceptrum fracticalcis strain DRI-13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1399131 37 100.0 37 ..................................... GAATATTCTCCAGAGCCTTATCGCCCCCGCAGGCTTC 1399057 37 100.0 39 ..................................... GCAGTTTCAACCAGTCAGCCCCGAAAGGGGAATACATCA 1398981 37 100.0 38 ..................................... TATTTCTTTTTGTTCGCTACGCATTTTTTCCAGTAATT 1398906 37 100.0 38 ..................................... CAAACTTAGCCCTTCGCCCCATTTGAGCAGGACTTTTT 1398831 37 100.0 40 ..................................... TCGGTTGTAAGTTCGAAATATAAAGGTTCGTCTTGAGTTG 1398754 37 100.0 37 ..................................... TTGACACGGGGACCCCTGCCCCTCGGACTCCCCAGGA 1398680 37 100.0 38 ..................................... CCAACTCGAATAGTACGTTATTGTTGTGAAAAATTGAA 1398605 37 100.0 37 ..................................... AGGAAGTCTACCGGAGTAACGAACCCATAAACATTGC 1398531 37 100.0 40 ..................................... TTGGCCTTACCGCCTGCCACTCAAGACTTCACTCTTATCA 1398454 37 100.0 36 ..................................... CGGCAAAGTCTACGCCGTAATGGAAACGCTTGGTCT 1398381 37 100.0 38 ..................................... ATCTAAGTAACCGTAATATAGAATTACGGGTTTCGGTC 1398306 37 100.0 37 ..................................... AAAAATCATCCTCTGTCAATTTATTTTTTCCTTCTGC 1398232 37 100.0 37 ..................................... AACAAATGTATAGAATTGCCAATATTGGAAGTGTTGA 1398158 37 100.0 37 ..................................... TTATAATCTTGCAGCTTATTGATATCTTGTTATCGGC 1398084 37 100.0 38 ..................................... AAAAAATCGATTTAGATAATGATTACGCTTCCTTAATA 1398009 37 100.0 38 ..................................... TTGAAGTTACCGATGGGGAAAGTGACCGCTCAAGGAGC 1397934 37 100.0 37 ..................................... TTTGCATTGTGGGATTTTATAAAGCACATGATGACAC 1397860 37 100.0 37 ..................................... ATATATTTGTCTGGAAAGGAGAAATACTACGAGGCGA 1397786 37 100.0 38 ..................................... ATACCCTTTCCCGATACGTTTCACTATCTGCCTCCTGG 1397711 37 100.0 38 ..................................... TTATTTTCTTTGTCCGATAATCGTTATATGCGGTATCT 1397636 37 100.0 35 ..................................... TTTTTGACTTTCCATCAGTTCTTTTGTGATGTCGG 1397564 37 100.0 37 ..................................... ATCCTTTGCAGGTTGAGTTATTTTTCTAGCCAGTGCA 1397490 37 100.0 39 ..................................... AATACATTCCAACATATTCCCAATTAGGGTTTGATTTAA 1397414 37 100.0 37 ..................................... ACGTTATAGGCTGCTATAATTGCAGAAGTTGTTTTAC 1397340 37 100.0 37 ..................................... TATGATTCTTCCTTCTTCGGCTTGTCCAAAAATTGCA 1397266 37 100.0 38 ..................................... GTTATGTCGATTCTAACCGGATTTTTTATTCTCAAAGG 1397191 37 100.0 37 ..................................... CTAAAAAATCATACACAGACGACTATATGGAAGAAGC 1397117 37 100.0 38 ..................................... GGGAAACAACCTGCACTATATCCATTTCCACCGCACAC 1397042 37 100.0 38 ..................................... GCTTTATTTTTTGCTCAAGCAATCCTTCTTTTTTGATT 1396967 37 100.0 38 ..................................... TTTGACACCGGGACCCCGGGCCCGTGTCGCATGGCCCT 1396892 37 100.0 37 ..................................... GAAAGAAGCAGAGCAGAGATTGCGTGATTGCCGGGAC 1396818 37 100.0 37 ..................................... GCCAAAGGATTGCCAACTTGATGAGATGACATATAGC 1396744 37 100.0 38 ..................................... ACAAAAGGCGCAATGGTATCTGAATAAACTAATCGAGA 1396669 37 100.0 38 ..................................... GATGTAATTGTCTCTATAACTGCTACGATTTGTATTTT 1396594 37 100.0 38 ..................................... GCGGAAGAATATTTTAGGCAGTTTAGAAGATAGGGCTA 1396519 37 100.0 37 ..................................... CTCCTATCGTGCGATTCTTTTCGCCTGACGCAGGAAC 1396445 37 100.0 37 ..................................... TATATAGTATTGACGGTGAATGGCCATAGGTCCGAAT 1396371 37 100.0 37 ..................................... ATACTAGTAAAATTTTCAAATAATGAAAGAACCAACT 1396297 37 100.0 37 ..................................... AGGCTCTCGGCTATAAACCGTATAGGCACCATCGTCC 1396223 37 100.0 38 ..................................... TCATTAGCAACTACCCGCATATCACCGATAGCATTACC 1396148 37 100.0 39 ..................................... TTAGTTCTTCCAATTCGTTTCCTCGTTCAATCAGTTTAT 1396072 37 100.0 39 ..................................... GATACTTGATGACATGGCCCAGGACGGAGAAAGAGAAAA 1395996 37 100.0 37 ..................................... AGTTCTTGTTTCATTACACTAGTAGGTTTACCGATGA 1395922 37 100.0 39 ..................................... TATCAAAAACCGCCAGGAGGCAGACAGTGAAACATATCG 1395846 37 100.0 38 ..................................... CGCAAGTATAATCATACCCGTTCACCGCATCAGTAGTA 1395771 37 100.0 36 ..................................... CCCCTGACATCCATTTCTAGATTTATCATTTCATGA 1395698 37 100.0 37 ..................................... AAGACATGTTCGAGTTGGCTGACCTGCTGAGGGCGGC 1395624 37 100.0 38 ..................................... CCTCATAATTTTTCTTCGGCGGCATTTTTACAACCGGG 1395549 37 100.0 37 ..................................... TCATAGAAACCATTACAATTCGTGGACAGAGGAGTAA 1395475 37 100.0 38 ..................................... TTTTCTCGGACATAAGGAATTTCCTTGACAGCAGACGT 1395400 37 100.0 38 ..................................... TTGTTAGAACAACTCCTGCAAATACGGCAGTAACTTTT 1395325 37 100.0 37 ..................................... ACTCTTTCTCAACCCTCTGTTGTATATTTGGCTCTAC 1395251 37 100.0 38 ..................................... CAAACTGTTTTATGTTCGCCATTCCCATACCTCCTTTT 1395176 37 100.0 38 ..................................... TCCAAAATTGCTTTGTTATTGACTTTTTCAATGCAAAA 1395101 37 100.0 37 ..................................... AAATATTGTCCTGTTATAACATTAGATGTTGATACGC 1395027 37 100.0 38 ..................................... GTACTTATCTATAACATCTTGTATCCACCGTCCGGATT 1394952 37 100.0 36 ..................................... ACCAGTTTCCCCTGTTGATACACTGGCTTTTCTGTA 1394879 37 100.0 37 ..................................... CCCGCTCCCCCTGTGGGAGGCATTCAAGATAAAACTA 1394805 37 100.0 38 ..................................... GTAGATTTCACCATAAAGCTGTACGGCCCCGGGGATAT 1394730 37 100.0 37 ..................................... ATGACGTTCAGTCGCTGGTTTGCCAATCCCATCAAGG 1394656 37 100.0 36 ..................................... AATTAATAGGCAAGGGTATTCACCCCCCTTAGTCAG 1394583 37 100.0 36 ..................................... CCCTCTGCGGCCATAATAATGCATGCACCGCAAACT 1394510 37 100.0 38 ..................................... ATCTATACAGATGGCAACAAACGAACAAGCCAACATCT 1394435 37 100.0 38 ..................................... GTATAGTGACATCAAGCGTAGTCGGCACCTGGGCAGCA 1394360 37 97.3 38 ...........................T......... CGCATTTGTCGCTGACATCTTCGACGTTGTGATCATCA 1394285 37 100.0 37 ..................................... ACGAAAATTTTAAAAGGATTCTTATAAGGAATCTTGC 1394211 37 100.0 38 ..................................... TTAGTAAGTTAAGAATGATTGCTGGCCGAGATAGAGCA 1394136 37 100.0 37 ..................................... GTACGACCAGGGGTTCATTGTCTGGTCCCCACCCGAC 1394062 37 100.0 36 ..................................... TCAAACATAACATGTTTAGGCATGATTATCACCTCA 1393989 37 100.0 36 ..................................... AATTTCAGGCTTTATTTTTCTAATATGCCCTTTCTC 1393916 37 100.0 39 ..................................... ATGTGGGAAGCGGCGGTGGGTATGCGGCAATCCGGCCTA 1393840 37 100.0 37 ..................................... ATGATGATTCAAGCCATGTTGATATTGTTGCATCACT 1393766 37 100.0 36 ..................................... AAAAGTCATAAAGCCTTATCCACCCCTTTCATCTAT 1393693 37 100.0 36 ..................................... AATTTCAGGCTTTATTTTTCTAATATGCCCTTTCTC 1393620 37 100.0 39 ..................................... ATGTGGGAAGCGGCGGTGGGTATGCGGCAATCCGGCCTA 1393544 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 76 37 100.0 38 GTTCCATTGAATAGACCCGATACATGGGGACTGAAAG # Left flank : GTGATGGAGGCTATTCATGAATTTCCAGTTAACCTGGGGTGCTTAGTCTATGCGGAATTTAAGAATGGAAGACTGAGCGTAAAAAAAGACATTCACATTATTGATGATGAGTTAAGACAATGGTTTATCGAAGAACGGGATGAAAAAATGCGGATGATTTATGAGGAAATTGACCCCGGAATTGCCCAGAACTGCTATGATACCTGCCCTTATTACCGTAACTGCCTTGGCTAATATTTTTCTTTAAAAGACAGGATTTATCTTATCTTTTATAGAAATTATCTTATGAATGTTTGCAAGAAATGATTTGAAAGGGGGAAAGCTTATAGTAGTTAGCGTTTATCTACGATTTGGTTCGTAATAGGGGGAAATGGTATTTTCGCAAAAGACCTGGTATTTCAAACAGAAAATATTTTTGCGGAAAAATAGATGTAGCTTGATTTATTTTGGAGTCCCGAAACGCAAGTCACAAGCCATTTCTAGGCATTTCGCCAAAGTCG # Right flank : TCTTTTGGTTTGCCTTGGAGCATCGAAAAGAGCCATGGTGGTGCAATGAAACAGACAAGATGGTAATGAAAAAAGCAGCCCTATTAAGGCCGCTTTCTTATAACTTGTTTATCTATATTTAATTCTTTAATCAAAGCATTTTCAAGGTTTGAGAAAAATTTATATTAGCTTTTTCCGCTTTTGTGTTTAGCCAATTTGGTATACTAAGTGTTTTTTTAATTGCACGATTATCATTTTCTTTTCGATAAAGATCTGTATCAACGTCAAATAGATTAACAAACCCATTTTAGTAATCTATAAGTATTTAAACGAGGGGCTTATTTCAGCCCGCCGCTTTTAGGATGTTATGTAATGTACCGATTGGGACATCTCCTTTATGTCGAGGGATTGGTATCTTTATCTCCGGCTTATCTGGGTTAGTAGCCAGGTAGAGAGGGTAAGGAGATTACTACATCAGAAATTCTCTACTTATGGTATAATTTAGGAAAAGAGTGGTAACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCATTGAATAGACCCGATACATGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //