Array 1 1115141-1113647 **** Predicted by CRISPRDetect 2.4 *** >NZ_NROJ01000001.1 Cronobacter dublinensis strain cro2864A2 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1115140 29 100.0 33 ............................. AGCTCAATCGACTGTTTTGACGACTACGAAGCC 1115078 29 100.0 32 ............................. CAACCTCGCCCGACTCCAGTGATTTCATTCGG 1115017 29 100.0 32 ............................. TAGCGTTGCCGATTGTTACGCGTTCCACTATT 1114956 29 100.0 32 ............................. CGCTAATTTACCGTTGGTGAGCGCGTCGCTCT 1114895 29 100.0 32 ............................. AACACACTCATAAAGTTTATTGCGAGGGTGTG 1114834 29 100.0 32 ............................. ATTTTTAGCGGTACTGACGGAATTAAGTTCGA 1114773 29 100.0 32 ............................. CGCAGCAAATTAACGCTGTGGCGCCAGGAGGA 1114712 29 100.0 32 ............................. AAGACGGCGACGTTCAGTTATTAGATATCGAA 1114651 29 100.0 32 ............................. TGGAATTACGCTGACCGGCCACGCACCGGTGA 1114590 29 100.0 32 ............................. CGGAAATGTGGCAGGTTTTATTCTCACGGCAC 1114529 29 100.0 32 ............................. TGGGTAGGGTGGTTAACCGGCTTGCGGTTTGT 1114468 29 100.0 32 ............................. GTGGGGGATCCAGTATGAGCACAGTAACCCAT 1114407 29 100.0 32 ............................. GAACCTTGCTCTTGAAGGGATTACCAGCTTCT 1114346 29 100.0 32 ............................. CCCACCTTTCCGCCGGACACCTTAGCGAACAC 1114285 29 100.0 32 ............................. AGCATCGTCCCCGGATCCGCCTGGTCTGAATC 1114224 29 100.0 32 ............................. CGTAGCTGGGTTGTTGTCTGCGTAGAGTCCAA 1114163 29 96.6 32 ............................A TGCGCAAAGAGCCGCTCGCCACCGCCGCGCCC 1114102 29 100.0 32 ............................. ATCTGCGCGATCAGCTGGCGCAAAAAATTTAT 1114041 29 100.0 32 ............................. CTCGCAACGTGGCTGGGAAAAACCGTTCTGCC 1113980 29 100.0 32 ............................. TCCTTACACTTACTGACACCCATGAGCGTCAG 1113919 29 100.0 32 ............................. CGCTGGTACGTATGGGTCTCGTTGATCTGAAG 1113858 29 100.0 32 ............................. GTGACGGTCGCAGAGAGCGCCGCCGGGCTGCA 1113797 29 100.0 32 ............................. TGGCAGACCCCACGGTCTGCGCACGTATCTAT 1113736 29 96.6 32 .................C........... GAAATAAAATGCATGAAGGGAAAGATAAAAAA 1113675 29 96.6 0 A............................ | ========== ====== ====== ====== ============================= ================================= ================== 25 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGAAAGCTTTAAATGGATGATGGCGCACAACATCGCCTTTATTGTCGTCAATATCAACATCAACTATCGCCGTCCTGCGGTGCTTGGCGACATGCTGACCATCACCAGCGAGATGAAACAGCTCAATGGTAAAAGCGGGGTGCTGAGCCAGGTGATTACGCTGGGGCCCGAAGACGAGGTGGTCGCCGACGCGCTCATCACGTTCGTGTGTGTCGATCTTAAAACCCAGAAAGCGCTGCCGATTGAAGGCGAACTGCGCGAAAAACTGGAAAATATCACAGGGTAAATTCTGCAATCACGCTGCCTGTGCGTGTAGTCATGGACTTCCACTCACCGAAAGCGAACAATCCGGTAGATGTTATCGGCCCGAAAGCACGCGGAAAAAAGGCTTTTAAAATCAACAGGGCAGCCGCTCTTTAACAAGATGGGGTGTGAAGTAAATGTTGGTAGAATGTTGGGGTCGATAAAATTTTAAAGAAAACAACAGGTTGTTTTTAGA # Right flank : AACCCGTTCGCCGCGGCGCAAAAAACGCATCTCTGTCACTCGTGCCAGCCCGAATATCCAGCTAACCACCCGCCAGGGCAATCCCTCCCAAACCCCATATTCTTCAGCGGCGTTTATACTTCAAAGCCAACATGAAATTTCGCAACACTGCGCAACGAAGGAGAGGCTATGCGGGTACACCATCTTAACTGCGGTTGTATGTGTCCTTTTGGCGGCGCGCTGTATGACGGCTTCAGCAAAGGGTTGCACGCGCATCTGATTTGCCACTGTCTGCTGATTGAAACTCAAAATAACGGACTGGTGCTGGTGGATACCGGCTTCGGCTGCGACGATATGCGCCATCCTGGCCGTCGTTTGCCCCTCTTTTTCCGGGCGCTGAATAACATTCAGTATCGCGAATCATTAACGGCGCTGCATCATATTAAGTCGCTCGGTTTTAAGCCGGAGGATGTACGGCACATTGTGCTGACGCATCTGGATTTCGATCATGCGGGCGGCAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //