Array 1 8717-9782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCWJ010000007.1 Escherichia coli strain 1832-43 1832-43_S3_L001_NODE_7_89935_cov_16.987763, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8717 29 96.6 32 ............C................ ATTTTTACTGAAATGACGGCTCGATTTACAGC 8778 29 96.6 32 ............C................ CAACGGAGGCCCAGGGCGTGCCGGTTTCGAAA 8839 29 96.6 32 ............C................ GTTAAAAACCATTTACGGAGATAATAAATAAC 8900 29 96.6 32 ............C................ TGAACACACTTCCAAAATTCAACGGTGACGCC 8961 29 100.0 32 ............................. CCGCTTCCCCGCTGGCTGTGTCTCGTCTCGTT 9022 29 100.0 32 ............................. GAAAATGCTCTTTGAAAATGCAATGCCCCGCG 9083 29 100.0 32 ............................. CAGATACCTTGTTTTGTAACTGCGTTAATGTC 9144 29 100.0 32 ............................. CCACCTTTAAGCGCCATACCATTTCACATATG 9205 29 100.0 32 ............................. TTGCTCATTGCGAATCCCTCATCTGGCCTTAT 9266 29 100.0 32 ............................. GACATCATTTTCACAGCGACGCAAACAGCCGT 9327 29 100.0 32 ............................. CCAGTGGATTGAGACCACATACCAAATCACCG 9388 29 100.0 32 ............................. GAAGATATTTCTGGCGTTGGCCTGCGCGTGAC 9449 29 100.0 32 ............................. GCGGATCAGATAGAAAAACTATTCCGACAGTT 9510 29 100.0 32 ............................. TAAACGCACCTGGCGCGCCACTTTATCAACAA 9571 29 100.0 32 ............................. ATCATCCTTGCTGCGACGGACTACAACCGCCG 9632 29 100.0 32 ............................. GTCCAACGACATGAGGCGGTGGAACGATACGT 9693 29 96.6 32 ............C................ TCAGCAACAATTATTTTCGTCGCATCGTCATA 9754 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGACGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTTTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACACCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //