Array 1 224-2338 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPEW01000454.1 Rhodoplanes piscinae strain DSM 19946 NODE_454_length_2376_cov_6.8134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 224 36 100.0 38 .................................... CACGAATTGGTATTCGTCAGGTTCGCGCCGAAGATGTC 298 36 100.0 36 .................................... CAGCCACTCCACAAGGTCCGTGGTGTAGTAGCTGAT 370 36 100.0 38 .................................... CCGAGCACGCCGCACAGGCGGTCCTCGCACTCGCGGTA 444 36 100.0 41 .................................... CCCGGGCGGACGCGCGGGCCGGGCGACCTGATCTTTCCCGG 521 36 100.0 40 .................................... CGTTTTGCTATTGGAATTGTCGCGTTGGTATTTTCGACAT 597 36 100.0 36 .................................... CACAACACTAACACGGAGTAGATAAATGGACGAGAA 669 36 100.0 40 .................................... CTTGAGACATCATTCGAACGAATGATTAATGTTAATCTTC 745 36 100.0 38 .................................... CCCGGGCAGTTGCGCTGCAAGAACTGTCGAACCAAACA 819 36 100.0 38 .................................... CCATTTTCGTCACTTGTGTCGGCTGCATTGGGCTTCGG 893 36 100.0 35 .................................... CTCGATCACGGCCACGTCCTTGCCGCGCCCAAGCA 964 36 100.0 38 .................................... CTCAGCCACTACGCCGCGTCGGATATCACTAAGGTTGC 1038 36 100.0 38 .................................... CCCGAGTTCGAGCGTTTCCTGCGCGAGGCAGGATTCTC 1112 36 100.0 38 .................................... CGTCGCGGCGCGAGCGCTAATGCCGACTGGCTCGCGAA 1186 36 100.0 38 .................................... CCAGACCGATGAAAATCCCAATCCGGCGAAGCGCATCG 1260 36 100.0 36 .................................... CACCGTCCGAGTGCAAATGAGAACGCAGCTTTCATC 1332 36 100.0 37 .................................... CCCGGCTCTACGCCGTGAGCCGCGAGCTTGGTTGGCG 1405 36 100.0 39 .................................... CGCGGTTCGATGCGCTGAACGACGACGGTGCGGATTCAG 1480 36 100.0 41 .................................... CTTGGCAGACATGCTATCGGTCGATCCTTACGAGTGGACAG 1557 36 100.0 38 .................................... CGTGCCGGGCTCAGTGGGCTGCTTGCCGCCAACATGCT 1631 36 100.0 38 .................................... CGCGCCACCCCATGCGTTTTCCCACGTCGCGCCAGCCA 1705 36 100.0 39 .................................... GGTGGATCAGTAAGACGATCCTCGATTGTTTCTAGGGCA 1780 36 100.0 38 .................................... GTAGCCAATACCGGCACCAGCGAGCCGAACTATCCAGG 1854 36 100.0 40 .................................... GCGCCGGGCGACCCGATTCCGGAGCCCGTGCCATGAGCAT 1930 36 100.0 41 .................................... GGCGCCACGGTCGGGGCGCAATCGCTGACCCCGCTGCGGGC 2007 36 100.0 37 .................................... GGAGCAGCGGCAGACGGCCATCGAAAAGCTCCTTCAG 2080 36 100.0 39 .................................... GCATCCAGACAATTGGCTTTTTGTCGCCCCAACGTTCAA 2155 36 100.0 36 .................................... CAGACCGACGGAGCCTGAGGGCTCTGCAATTAATTG 2227 36 100.0 40 .................................... GCGTCCAGATCTGCGGCCGCGGCACGCGGCTGGCCGAAGG 2303 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 29 36 100.0 38 GCTTCAATGAGGCCGCGGCGGTGAAACCGCGGAAAG # Left flank : GGCCCGGCCGGGCCGGCGGCGGTGCCGGCCGGCGGCACCCCGGGCGCCCCCACCGCGGATGGTGGCACCGCGGGTGGCACGCCGCATCGCTGGGGCCTGTCGCAGCAATGGGCGATCCGCTGACCGCGGGGCCGATCTCCGCACGGTCGCCCGGCCCGGAGAGGCGGCGCGGTGGAGCTGCGGAAAGCGATTGGTTCGAAGTGTGCGAGAACGCGCAGTGGTGG # Right flank : AACCGACACCCTCGCCGAGAACGATCTGTGGCGCTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCGCGGCGGTGAAACCGCGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.80,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 372-924 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPEW01000547.1 Rhodoplanes piscinae strain DSM 19946 NODE_547_length_973_cov_14.3058, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 372 37 100.0 37 ..................................... AGCAGCGCGTAAGACAGGCCGGATGTTGTCGCGCCAG 446 37 100.0 36 ..................................... GTACGCCCCTGCGAAGGCGCGGCGGGCCTCCTCAAG 519 37 100.0 36 ..................................... TTGCCCCCGGAAGTTATCCAGGCGCAGGCTGAAATT 592 37 100.0 37 ..................................... TGGGTGGGCAGGGTCAGACGCGCTTCGATGCGCCCGA 666 37 100.0 36 ..................................... AGACAAATCTACGGGCTGATAGAATTGACCAATATC 739 37 100.0 37 ..................................... ATCTTCCATGCGTCGTCGGCCGCGGAGAGTTCGGCCG 813 37 100.0 38 ..................................... TGGGCAAGACGCGCCTTTGCGCAACTGCCCCGAACCCG 888 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 8 37 100.0 37 CCTTTCCGCGGTTTCACCGCCGCGGCCTCATTGAAGC # Left flank : TGGTTTCCGGCCGATGCGCTCGCCAGCCTGCCCGACGACCGCCTCTCCTTTCTGCTGTTCCCGGTCGAGCGGCCGGATCCAGCGAGCCAAGGGCCTGATGCTGCGGATTTGATCGCCCAGACCATGCCGCGACCTCCCAGGGTGTTATGATGGCCGGGCGTTGTCGGCAGGTCGCCGCCGCCGCGCGAGCGCTGCGGTGGCGACGGAATCCCGGGGACCGCTCGCGGGCGGGATTCGGCTTACACCAGCGCGGGTTGTTTGACATCGTGAAGGATCGGAGCAGCCCTTCGGCGGGCGCTCGGCCGTCCATTCCGGGAGCGCTCGCAAACGCCGTCGAATCGCTCGCCGCTCCGGCGGCTTGCAGGCAGACGC # Right flank : TAGAAGCGCCACAGATCGTTCTCGGCGAGGGTGTCGGTTCTTTCCGCGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTCCGCGGTTTCACCGCCGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.50,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 10302-10690 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPEW01000158.1 Rhodoplanes piscinae strain DSM 19946 NODE_158_length_10996_cov_39.0791, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 10302 37 100.0 33 ..................................... TCCTTTCTTCAACTTCCTGCGCTCCAACGATCT 10372 37 100.0 37 ..................................... CTCATCGTCGCCGATGATTTCACACCCCATGGGGTGT 10446 37 100.0 35 ..................................... GCAGGGCGGCCCGGAAGAACAAGACGAAGCACACC 10518 37 100.0 31 ..................................... TGCCGCAGGGCCGCTGCGGCGCCGGTTGAGA 10586 37 100.0 31 ..................................... GGCATCGGCCGGGTGGCGAACCACCAGACCA 10654 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 100.0 34 GTCTGGCGACCCTCCGCGACGTGAAGCGGATTGAAAC # Left flank : TTCGCCATCGGCGACATCAACACCTATCCGGGCAAGCTCAAGCTGATCCTCTCCGGCTTCCACGAGGGCGCCCTGATGGCCCAGGCGGCCGCCCGCTACGTGTTCCCGGATCGCCGCCCGGTGTTCCAGTACACAACCTCGTCGACCAGCCTGCAAAGGAAGCTCGGCGTCGAGTGACGGAGAGCATCGTCCGCCGACGTGGGCTCCGGTTCGCCGTCGAGAATGCGATCCAATATGAACTTCTGGAGCGCGAGGCCCCGGGCGCGCCTCGCGGAACCCAGGACGGGCGCGCCGGTCCGCGCCGGCAGAGCCCTTGTTGTTTCAGGGGTTTTTCGTGCGACCCATGCTGGAAAATCGACAAGTCCATGATGTGAAAGGCGAAAACGCCCTGCGACGGGGGCTCGTTCCGGGTTTGTGCAAAACCCCTTGACGGCTTCGGCCGGGGCTTGCTGGAAACGCCACCTAATTCCTGAGCTTGACGCGAGGGTTGCAGAGGATCA # Right flank : TCCTCGTTCTCCGTTGGAAGGATGAAGTGGACTTGTCTGGCGACCCTCCGCCCAATACCAACGGCAGCACTTTCGGACTGCATCCTCCGGCCGAAGGCCGGGCACGACGAGTCGCATCAGCAGCCATCGGCATGCGAGAGCATGTCGTGAGCCTCGTGCACCGGACGCGGCGCGCAGTGCCGCGAGCGGGGGCCCAGAGCCGCAAGCGCCGTGTGATCGCCGCTCCTGGGTCCCGGGTCTCCGGCGCGTCGCGCCTCCGCCCGAGACACGCGACCTCCGACCAGATCAGACCAACGGCAGCACTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGGCGACCCTCCGCGACGTGAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : NA //