Array 1 33479-31158 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000078.1 Clostridium sp. N37 c_000000000011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 33478 30 100.0 34 .............................. AATTCCTCTTCTGCTCTTAAGAAACATTCTTTAT 33414 30 100.0 35 .............................. TTTCTGACCTCTTTAATTTCTTTCTTAGGAATAAC 33349 30 100.0 34 .............................. CAAAGAATACGGATAAACTTATGGATTTAAATAA 33285 30 100.0 36 .............................. TACAATAAAAAAGTATTTATTTAGTATAGGTACTTC 33219 30 100.0 37 .............................. TAATGAGGTGTCTTTTTATTTTACATAGAAAGGAGGG 33152 30 100.0 37 .............................. CATCTACCAAATATTTTAACAACATCACCGCGTTTAC 33085 30 100.0 36 .............................. TAAATATCTCTTGGATCAGTTAAAGCTTTATTTCCG 33019 30 100.0 34 .............................. TGATTACCACTTACAACTATAATCTTTTTAGGTT 32955 30 100.0 37 .............................. GTTAATAAATGGATAAATAAAATGGAGGTGTGTTAAA 32888 30 100.0 36 .............................. CCTCTAGCTAAGTCCTGTATTAATGTGGCAGGATAC 32822 30 100.0 34 .............................. TCATATATTCCGCGTTCAAGTAAATCGAATAATT 32758 30 100.0 36 .............................. TATTCCTCCACGCCATCCATCCAGTAACTTAAAGAC 32692 30 100.0 36 .............................. TAAGCATACTCCTTAAATAAAGGCAGTTCCTGCTCT 32626 30 100.0 34 .............................. TCTTTTTATTTAATGAAACGTGGAGAAAAGAAAA 32562 30 100.0 36 .............................. TTCTTTTAATTTATCTTTCTTTTCATAGTCCTTTAG 32496 30 100.0 37 .............................. AGGAACTTATGGGGAGATAAAGAAAAAAGAGAAGAAG 32429 30 100.0 34 .............................. TTATAATTTACTTTTATATACTGCTTACTTTCTA 32365 30 100.0 36 .............................. TTGAACTTGTCTAATTTTAAAGTTTGTTGGGAATTA 32299 30 100.0 34 .............................. CAATGCCTATAAAACCTGGAAATGAATGTTTAAT 32235 30 100.0 34 .............................. AATGGTAATGGTACAAGAGATAAAATTATCTCAG 32171 30 100.0 37 .............................. AAGAACTTTTCGACAAATAAAAAATAAGGTAGCTCCT 32104 30 100.0 36 .............................. AGAATATATTGTTAACCAAGAGTATAAAAAATTATT 32038 30 100.0 35 .............................. GATTATTACGTTAATAATTGGAGTAAGGGAGAACA 31973 30 100.0 36 .............................. AATGAAGCAAAGTCTGGTATTCCTACCACTGTTAAA 31907 30 100.0 36 .............................. TGAAAATAGGTATAGATTATGGGCATTGTCTAAAAG 31841 30 100.0 35 .............................. TTTGACCACTCCTTATATAACTCTATCCAATCTTT 31776 30 100.0 36 .............................. TTTAAAGTATCTAGCAGAATTTGATTATTAATCTGT 31710 30 100.0 36 .............................. TAAAAGTAATTTAGAACAAATTTATAACCATAACCT 31644 30 100.0 34 .............................. AACAGATTACAAAGGCGAAAAGAAATTAGCTAAA 31580 30 100.0 36 .............................. TGCCACAGGATTAAGGCGTGTACCGCACGACCGATA 31514 30 100.0 36 .............................. ATGTTTCTCAAGTTACATCGACATTTAACACTGTAT 31448 30 100.0 35 .............................. ATTACTCCGTCATTTCTGACTTCTTTCTTCTTAGG 31383 30 100.0 34 .............................. AATATGGATAGAGCAAGGAAACACAGGTACAGAA 31319 30 100.0 36 .............................. TCTACTATATTTTCAGTAACTTTCCTACTTTTCATA 31253 30 100.0 35 .............................. TTGTTCTCCCATAAATTTCTCGAAACGTGTTTTAA 31188 30 100.0 0 .............................. | T [31160] ========== ====== ====== ====== ============================== ===================================== ================== 36 30 100.0 35 GTTGAACCTTAACATGGGATGTATTTAAAT # Left flank : AGGTTCTACTGAAACCTTATCATTATCAATTTCTTCTATTTTACTAGCTAATTTTTCTTTATCTATAACAAATGAGTCCTTAAATAGTAAATATAGAGCAAATGAGTTCTTTTTCTCTTCCTCTTTATCTTTTTTCTCTTGTTTTTTATTAAAAATTTTAAACATCAACATCCCCCTTAAGTTCTTATATTAAAATAAGTATAGCATCATCTCCTCTAAACTCATAATCTTATTTAAAATTCAGATATAATTTTGAAATAAAATTATATCTGAAAATACTCTATACATATTTAAATTAAAAATATCAATAAATTAAACGAAATTTTACCAACCTCACTTAAAAGAAAACTCACTATAAACCATTGAAATATAAAGGTTTGTATGAAATTTTTTAGTAGATTTTTTAAAAATGCAAAACGGTTGGTAAAATTTTAAGAAAAGCCTTTAAATACAATGGTTTTAATGATATGATAAAAATAAAGAATGGCTTAAATTCAGTG # Right flank : GATTACCTTTTGATGACCATTTATAAAATAAAAAAATATGATAATAAAAATTATAAGCTGAATATTGCTTATATAATGTACAGTAAATAAGGATACTTATGTTTTGTATAGTAAGGAGGACTAAGAAAGCATGATAGTAAATGAAAGCACACCAACAATTGAAACGGAAAGACTTATACTTAGAAAGTTTACTGAAAATGATGTAGATGCTTTATTTGAAATATTAAGTGATGAAGATGTTAACACTTTTTTACCGTGGTTTCCGTTAAAAAATATAAATGAAGCAAAATTGTTTTTGAAAGAACACTTTTTAGAGTATTACAATAAGCCTTTAAGTTATCGCTATGCAATTTGTCTAAAAGAAGATAACAAGCCCATCGGCTATGTTTGTCTTTCTGATGATGAAAATCATGATTTGGGTTATGGACTAAAAAAAGAGTTTTGGAATCAAGGTATTGTAACGGAAGCATCTAAGTCAGTAGTTGAACGAATTAAATGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 32189-30981 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000006.1 Clostridium sp. N37 c_000000000021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 32188 30 100.0 35 .............................. GACGGAGTTTATAAAATTACAGCAGATACAGATGG 32123 30 100.0 36 .............................. TGTTCATTAGAGATTGCCCAACGCTATTATCTAATT 32057 30 100.0 35 .............................. CAAAAAGGTAGCGGTTTGGTCCATAGAGGATGTAA 31992 30 100.0 34 .............................. CCACACTTTGTTGCACAAATTATTTGGATTGCGA 31928 30 100.0 36 .............................. TACAAAAGTAAATAATAAATTAAGCCATTCATTTAT 31862 30 100.0 36 .............................. TATTCCTTATCAAATTGTTAATGGTCCTACTAACCC 31796 30 100.0 35 .............................. ATATTATCCATTGTTTCCCTCCACCCTATAAATTT 31731 30 100.0 34 .............................. CTAATGAAGGAGCAATAAGCAATTTAACATTACA 31667 30 100.0 36 .............................. AATTTACAAATTTTCAATAATCCAGAGTTTGGAGAT 31601 30 100.0 36 .............................. GCCTCTGTAATTAATACTCCGTATCTTTTCCCACTC 31535 30 100.0 35 .............................. TTTAATATTTTAAATATATTTTGCAAATCTTACTT 31470 30 100.0 34 .............................. ATGTTATAGAGGATAAATATATTTTATCTTCCAC 31406 30 100.0 35 .............................. TCTTTCATTCTCACCTTTCTTTTAAATCTTTCTTT 31341 30 100.0 36 .............................. GAAAAAGGTTTTAAGCGACATAGAGTTATCAAAAGA 31275 30 100.0 37 .............................. TAAAAGAAGTAAGAAGAATAGAAATAGCTTCTTTTAT 31208 30 100.0 35 .............................. GCAATTTTTTTTAAGGTTGCCATTTTAGGGTTTTT 31143 30 100.0 36 .............................. TATAAAATGTCTTTGCTTTACCATCTTTAAGACCGT 31077 30 100.0 37 .............................. TGGATTTTTATATTAATATCCAGAACTTATTAAAAAA 31010 30 96.7 0 ........T..................... | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 99.8 36 GTTGAACCATAACATATGATGTATTTAAAT # Left flank : CTGTAAAAGACACTAAATTTAATTTTATGTTTGCATTAAGTAAAAAAGAAATCAATATAAGTGAAGATGAATTTATTGATTATAAAAACTTTAAAAGTTTTATTTTAGAGTTAATACAAAATGCTTTTGAAGAACATGGTATAGGAGCAAAAACTTCAATAGGATATGGGTATTTTAATATTGATAAGGTTGAAGATTCTGAAAAAATGAATCTATAGATAATTCCTGCCAAGAAGAGATAGTAAGTGAGGAATAATTAAGGATGCTTGCTGACAAATATAGTAAGAATTCAAGAGTTAATTATAGAAAAAATAAATAGAGTATTTACCAATCACATAGAATAGAAAACTCCACATAACTCATTGAAATATCAAGGTTTATATGGAGTTTTTTATTATATTTTGTAAAAACACAAAACGTTTGGTAAAATTTTAAGAAAATCCTTTAATTTCAATGGGTTTAATGATATGATGAAAATAAAGGATGGCTTAATTTCAGTG # Right flank : AATAATATGTTTTCCATTGGTCAAGCTCGGTGATAAGTTGAACTTTAACATCAAGACCAGAATCTGATGAGTTATTTCAAAGGCTTTCCATTTCTGAGTATGAAACTGAAAAAGCTGTAATTACTAAATCTGATAGAACAATGGATAAAGTAATAAGACTAATAAAACAGGCTTATAAAGAAAATAATATTGAGCTTCCATAGCAGTATACATTTCATGTGGAGAATCTGTTTAATATTAGAGAGAAAGAAAGTGATAAAGTTAAGAAATTAGTAAAAGAGCTATCTAATATTGATGAACTGATGTATAAATCATGGAATTTACAGGATACATATCAATTTATTTGGTTAGCATGGGGAAACATTAATATTCAAATTAAATAAGCAAAAAGAAGTGTTAAATAAATATACCAATGCAATTATTGTTCACAAATTAAACTATAAAGGAAATTTAAAACATGTAGAATATCCAGTTCAGCCTTTATATATGAATTTAGAATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCATAACATATGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 41573-42457 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000006.1 Clostridium sp. N37 c_000000000021, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 41573 30 100.0 37 .............................. ATGCTACTGCAGCACTCGAAATACTAAACCCTAACCT 41640 30 100.0 37 .............................. GGCGTCTATTTTTCTTGATTTTCCTTATTTTTTAACT 41707 30 100.0 35 .............................. ATATATGAGCTATATAATAATATCTTTAATAGCAA 41772 30 100.0 35 .............................. GAGAACATTGATTATTCTAATTCGTTTTTAGATGA 41837 30 100.0 36 .............................. AATAGAGGAGTTCTATTTCAAGGGTAAAAAATGGTA 41903 30 100.0 36 .............................. GATTTTGATCTTCTATAATCACTTCTTCTTTTTCTA 41969 30 100.0 36 .............................. AGCTCTAGTTAGTAAAACTAGGGCTTCATTTATTTT 42035 30 100.0 36 .............................. AATTTTATTTCCATTTTCAATTTATCTTTGGTTATG 42101 30 100.0 35 .............................. TACATGGGCGCGGCTAAATATCTTAAGGGAAATAC 42166 30 100.0 34 .............................. TTCAAATAGCAACTAAATTAAATATAGATATTAG 42230 30 100.0 36 .............................. TTTAATCTAGCTTCTGCATTGTTAACTCGTATAGTG 42296 30 100.0 36 .............................. TTCTTATCTAACTTTTAAATTAGGCAAGAAATTAAG 42362 30 100.0 36 .............................. AAATTTTTCAATTTTGCACCTCTCTTTATATAAAAA 42428 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 100.0 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : ATAGCATAATTCTATTAATATTTTTTCCAATTACATAACCACTATCTGCAAAATATATATCTCTTTTTAGAAGTGTCGTAATAGTTATTTCGAAATAATTCATCAATTTTCTCCTTAATAAATTTACAATTTTAATATATTATACCATAATATGAAGAATTAAGGCGACAAAAAAACTATAGTAAGTTTATTAATTACAAATCTTACTATAGTTTTATAAGTTTAATCTTATGTTAAGGTTCAACTTCATCAATTGAGAATTAAAATGGACAATTATTGATATTTCTCTACTTTATATATTTTTCCAAATAAAAAGTTTTTGATAATAAATTGTTTATTAAAAATACTAATAGATAGCTATCTTTAATAAAAATAAATATAATGAATTAATAAAAGCTATCATATAAGAATTTGAAATTCTTATATGATAGCAAAAGAGCAATAGTTAAAATATTGATAATACAATATTATTTTAAATTTCACTTTTATTTTTTTACTTT # Right flank : CCACTGAATTTAAGCCATTTCTTATTTTTATCATATCATTAAACCCATTGAAATTAAAGGCTTTTCTTAAAATTTTACCAACCAATTTATATTTTTTAAAAAAACAACAAAAAACTCCTCATAAACCTAGATATTTCAATGAGTTATGAGGAGTTTAATTAGAATTGAGGTTGGTAAAATTATATTATAAGATCTTCTCCTGTATTATTTTGCTGTATTCCTAGTATTTCTTCACCATATACTTTATCATTTAATAATTTGATAATACATATAAAGTCTTCTTCTTTATCAATTACTTTATTTAAATCTTTTTTTAAAAGTATTAAATTAGATGGAGTTATTTCTCCTCTAAAAACAGATTTTTGGAAATGAGAAAGATACTTTTTACATATTTTAAATACTCTTCCAACTCTTTTTTCATTAACATCATAAAATAAAAATGCATAATTATAGTTTATTTTTCCACTCATATTACATATTCTCCTTTAAATTAAAAGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [90.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 15537-16949 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000079.1 Clostridium sp. N37 c_000000000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 15537 30 100.0 37 .............................. AATTCCTCTTCTGCTCTTAAGAAACATTCTTTATAAA 15604 30 100.0 34 .............................. TAGTGTTTATTAATATATTCGTTCCTTACTATAT 15668 30 100.0 36 .............................. ATGGAGAAAAGAAATTGAGGAAGAAAATAAGTGGCA 15734 30 100.0 36 .............................. TTTCCTAAGTCATTACTCCAATTTCTAATACCTTCT 15800 30 100.0 37 .............................. TTTAATCTATTATGGAACACTCCAATTAAATTTAAAA 15867 30 100.0 35 .............................. AGGAATACTAAAGATAAAACAGCTAAAAAAGACTA 15932 30 100.0 38 .............................. ACCATGGGGGTAGGTATGGGTATAATTGTTGTTATAAA 16000 30 100.0 35 .............................. ATTATATGAGCAGGTGTTAGAACCTGCTCTTTTGA 16065 30 100.0 37 .............................. GATAGTTGATAAATTGGTATCTCCCTATCGGCGTATT 16132 30 100.0 35 .............................. ACGTTTACAAAAGAAATGGCGGATAAATGGTTTTT 16197 30 100.0 36 .............................. AAACTCTCTGCTGCTTTACAAAGACCTATACATCCA 16263 30 100.0 37 .............................. ATCTATCTCCGAACAAAACTTATCCCTCCGAACTAAT 16330 30 100.0 36 .............................. GTTCTCCAATTTTGAGAAGGTCTTATCTCTACAACG 16396 30 100.0 35 .............................. CCTAGCCCCTACCCTCTAACCAATCCCCTCAGTCG 16461 30 100.0 37 .............................. ATGAGATATATTTCTCTCTAAAATTGATATTCTCTAC 16528 30 100.0 35 .............................. AATTAATAAGTATGTAGAACCTTCAAAACGTGAAG 16593 30 100.0 36 .............................. AAAGTGATGCCATCTATAGTTATTTTCTTTGAATTA 16659 30 100.0 34 .............................. CGTTTTAATAGCCCTTTTTCTTTCCTGTATTTAA 16723 30 100.0 35 .............................. GCGATTGGGACCCATTAGATTTAATATAACAAATT 16788 30 100.0 35 .............................. AGCATTGATATTACTAGCTTAACGAGTTTTTTGAA 16853 30 100.0 36 .............................. GCAAGTGTAATTGGAGTTTGCAGCTCATGCCAAGAG 16919 30 100.0 0 .............................. | C [16947] ========== ====== ====== ====== ============================== ====================================== ================== 22 30 100.0 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : AAACTACATTAATTTTCTTATGATAATTATACTCTAAATAAGTGAACTCTTGTTTATATCTATATTATAATTATGATTCAACTTATTTCTATAAGTTATACCATTACTATAAAAATAATTAATGTTACTAAATTATCATCCAATGCTGTAAATATAGTAACATATCATACTAAAATCCAAAGGTTTAAACAAAATTATAGTTTTTAAATAAAATCAATATAATACCAAAATTTACAATTTGCAGAGTTGAGGTAACATAATAATCATATAAATATAGTATTGATTTATTGCTTTTTTTATATTAATAAATAAATAAATAAAGTTTTACCAACCTCACTTAAAAGAAAAATCACTATAAACCATTGAAATATAAAGGTTTATATGAAGTTTTTCACTAATTTTTTTAAAAATACAAAACGGTTGGTAAAATTTTAAGAAAAGTCTTTAAATACAATGGTTTTAATGATATGATAAAAATAGAAAATGGCTTAAATTCAGTG # Right flank : TAACTATCTTTTGATGACCATTTATAAAGCAGAAAACATATGATAGTAAAAATTATAAGTGCAGCCAAAGAATATTTCTGTAACTTTTAGAACATTTCAATTTAATTTTGATGACAATGAAAAACTTACTTATATGGAATACTGGAACAGATATGAAGAACATTTTGTCGAAAATGATCTCTAACTATAGTTATGTTATGAATATAATATGAAGCCAAAAAAATTACAATTTATTATCTGTAGCGGTGAACAGTGTTCGCCACATACTGTTTCCTCAATATTAAGTTGCAGGTAAAATAAAAAACTGGAGAACACTGTTCTCCCTTACAATAAAAAAGAGTTCATTGAACTCCTTTTTCTAATGCAAAATTCACAATTGTGGATATTTCACAACAGTTGCTGATAAATTACTATTTACTCAGTTGTTTTACATTTTTCATAAATTCCATAATTACTACTTGTAATAATTATAGCATGTATATCAAGTATTTGTTTTAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 18875-17729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000048.1 Clostridium sp. N37 c_000000000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 18874 30 100.0 36 .............................. CTTTTCTCTACAAAGTAATAAACGTCATCGTTTTTT 18808 30 100.0 36 .............................. TGTAGAAAGTAATGGTGGTAGTGGCAGTTGGGTTAA 18742 30 100.0 36 .............................. ACTTCTCTACGCGCTTTATTTCGCAATGTATTCCTT 18676 30 100.0 37 .............................. TTTCGAATTCTTCTCTAAGAGCCTTTAGTCTATCTCC 18609 30 100.0 36 .............................. TTTCTATACTAAACATTTTTATATCCCCTTTACTTT 18543 30 100.0 38 .............................. CTATAACCCTGTACCCATACAGGAGTATTCTTATTAAT 18475 30 100.0 36 .............................. AGTTAAAAAATAAGGAAAATGAAGATAAATAGACGC 18409 30 100.0 36 .............................. AAGGTTAGATTGTATAGAAAAGAAGGGGACTGGATG 18343 30 100.0 36 .............................. ACACATTTATAAACTGGTCTATCCCAATCATCAACT 18277 30 100.0 36 .............................. TATATTAAGGGTAAATAATACTTTAAAATATTCAAA 18211 30 100.0 34 .............................. TGCTTTTAATTTAATATTTTAATTAATTATTCTA 18147 30 100.0 35 .............................. CCTCGAATATTTTTCTAAAGTATTGTCCACTAAAG 18082 30 100.0 36 .............................. GCTCTATGTGTAAACTACCAAAGGTGGCTACAAGCA 18016 30 100.0 34 .............................. CATACCATATTTGCCCTCTTCTTATTTCTATAGC 17952 30 100.0 36 .............................. TGGGGAGAAGACGAAGAATTGCTATTTGCGGATGAA 17886 30 100.0 34 .............................. AATAAGGTAAAATCATATGCTGAACGATTAACTG 17822 30 100.0 34 .............................. ACATTTTAAATTCTTCCGTACTTACACTAACGGA 17758 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 18 30 100.0 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : ATGAAAGATGAAATACCAAATGGATACAATGAAATAAGAGGATGCAAATTTAACACAAGATGTCCATATGCAACTGAAATTTGCCAAAATCAAGTACCAACATTGAAAGAAATATCAAAAAATCACTTTGTTGCATGTCACAATTTAATGAAAAATTAAAATGAATTTTAATTTTCACAGCAAGTCTTTAATTATCAATAAATATATATAAACTTTTACCAACCACCTCTGGGGAACAGTAGTGAAGCCCTTTAGGGTTCCCCTGAGGTACAGTATAGTTTGGAACAATATCAATAAGTTTAATAGCAATTTTCGTATAAAGTTTTACCAACCTCGAAGGAAATAAAACTCCTCATAACTCATTGAAATATCAAGGTTTGTGAGGAGTTTTTCATTATATTTTACAAAAATACAAAACGGTTGGTAAAATTTTAAGAAAAGCCTTTAATTTCAATGGGTTTAATGATATGATGAAAATAAAGAATGGCTTAACTTCAGTG # Right flank : TAAACTTTTCGTATTCATCTTTTGCCCATTTTGGTGGTTTATAAATGATAATATAGAAATGTAAGAAAATGATCATTTAAGAATGTACTAATTATGACTATGTATAGTATAATTACCAATATTAAAATTGGAGGTAATTATGATTATACAACTAGATATTCATTCAGAAATAGAAATAGATAACTTAGAAGAGCTTCATAAATTAAAGTTTATTATGGAGGAAAACAATTTGAAAGTGAACAAAAGTCAAATAGCAAGAGAACTTGGAGTTGATCCACGTACTGTGGATAAATATTTGAAAGGATATGTGAAATCTACTACTAGAAATCGTAAATCTAAAATAGACTCTTTTGAACCTATTATTAAAAAGCTTCTTAGCAAAGATTCTATTCAAATATTTTATTATAAACGTATTTTATTAAGTGCCATGATTTATTGCAACAATTAAAACGTGCAAATTTAGAAAATCGATTAGATGCCAGGCTTAAACATTTTAGTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 41376-40756 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000048.1 Clostridium sp. N37 c_000000000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 41375 30 100.0 35 .............................. ATGGAGAAAAGAAATTGAGGAAGAAAATAAGTGGC 41310 30 100.0 35 .............................. TTGAATTTGCTATAATATAAATTCATGTCTTCTAA 41245 30 100.0 35 .............................. AATATATTGTACTGCTACTAAGATGGATCAAGCTA 41180 30 100.0 36 .............................. TTTTCTTTTATCGTGCCTGTAGGTCTATATTCTATT 41114 30 100.0 36 .............................. TAAAATTCAACCACCTTTATATTGTATTCTCCAATT 41048 30 100.0 35 .............................. GTTCCTAAAGGCTCCATTCCTAAAGCTCTAAGGCT 40983 30 100.0 36 .............................. AGGTTTATTAAAAACAAATAATAAACTTTGGTATGT 40917 30 100.0 36 .............................. CTGGTTCCGTGAACAGTGGAAAGCAAGTGAAATTAC 40851 30 100.0 36 .............................. ACTATTTCCTATAAGGAGTAATCTATTAAATAAAAA 40785 30 90.0 0 ........................C..TG. | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 99.0 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : GGTGGACAAAAAGTTATAGTTAACAATGGAGCAGCACGTCTGGAAAATGGAGGGTTAGCTGGATCAACATTAAATTTGAAAAATGCAGTGTATAACATGGTAACAATGTTAAATATACCAATTCAAGATGCTATAACAATGGCTAGTTTATCTCCTGCTAAAGCAATTGGGGTAGACAATTTTAAAGGAAGCATTGAAATTGGTAAAGATGCGGATATGCTGTTATTTGATGATAATATAAATATATCAGCAGTATTTATTAATGGAAATTCTGTCAATTTTTAATATTAAATTATCATCTTAAATACCAATATCATATAAAATTTTACCAACCTCATTTAAAAAGAAACTCCCTATAATCTATTGAAATATCAAGATTTATATGGAGTTTTTTGTGCGTTTTATAAAAATATAAAATGGTTGGTAAAATTTTAAGAAAACCCTTTAATTTCAATGAGTTTAATGGTATGATGAAAATAAGAAATGGCTTAAATTCAGTG # Right flank : GTTGTCCAATTTACAATTTTATCTATAAAAGATAATATAAAACTTAGAGTAAGTGAAATACTTAGTTAAATTTGAAGATTAATATATTATATTAGTGTAATAAGTCAGATTTTTTCACTTTTTTGTTGTAAAATTTTCTTAAATAGAATTTGAAAAATTTAGTAAACTTTGATAATATATAATATGTAATACGTATTAACTAAATTTTAGGAGGAATATTGTATGAGAGGAAAAAGAATAAAAACTTTATTATTAACAGGAGTAGTGCTTTTAACAGCTACTGGATTTATGGGTTGCTCACAAAAGACAGATGAAACTCCAGATACTAAAGTAGAGGATAAGAATACAGACGAAAATAAAGATGAAAATAAAGATAGCAACCAAGAAGAAAATAAAGACGAAAATAAAGATAAAAAAGAAGAAAGTAAATAACATACTTAAATGCTATAAATCAAACATAGAGGATTACTGGGAACTACGCCTAGTAATCCTCTAATTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 58033-54988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSQB010000048.1 Clostridium sp. N37 c_000000000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 58032 30 100.0 36 .............................. GCTTGTAGTTGTGCGGCTTCTGTTCTCTTATCATAG 57966 30 100.0 34 .............................. GAAATGAAAGATATAGTTAATAATATGCATATAG 57902 30 100.0 37 .............................. AAGTTAGTTATATAATTTATTGCCTTATCTCTTGCCG 57835 30 100.0 36 .............................. AGTATCCTTCCAGCTAAAGCTTCGTCGATATTGACC 57769 30 100.0 36 .............................. AAGGAGGTGCAAAACGACATGCTAAGACAACTTAGA 57703 30 100.0 36 .............................. TCTATAGCTTTTATTTCTTCCTGTAAAGCTGCTATT 57637 30 100.0 34 .............................. TGTATAACGGGTACAGTTACGCTATTGCCTGCCT 57573 30 100.0 36 .............................. TCCTCTTTTTTACCTATTACAGCAAATGCAATTCCT 57507 30 100.0 34 .............................. CTTATTTCATATGTCCATTTATCCATTTCTTTAC 57443 30 100.0 35 .............................. AAGACTAATTACACAAATAACCAAAGATGATTTTA 57378 30 100.0 35 .............................. AAAGTTTTTGAAACTGGAGAAATACAGAAGGTATA 57313 30 100.0 35 .............................. TTACCTAAAAGAATTTTATTTTTTTTATGGTTGGC 57248 30 100.0 36 .............................. TAACTAAATATGAAAGCGGTGAAAAAAATATTAATA 57182 30 100.0 35 .............................. AAGAGGGATTAAGGGATATGTACCTATGTGAAACC 57117 30 100.0 36 .............................. GTTTTACAAATTTTCAATAATCCAGAGTTTGGAGAT 57051 30 100.0 36 .............................. ATAAGCGGTATGTTTAGTTGGGGTGGAGATGTAAAA 56985 30 100.0 35 .............................. AGAAGATTTAGTATTAAAAACTTAAAGGAGGAAAA 56920 30 100.0 37 .............................. TACTCTCCATGTACTACGTTATGGCACTTACTACACA 56853 30 100.0 35 .............................. GTATATTTAAATACAAGTGATATTGAAGTTAAAAA 56788 30 100.0 37 .............................. ATACATGTAAATGCTGGAGGAGGGCAAGGGACAGAAA 56721 30 100.0 35 .............................. TTGATTAATTTTTCCTTGTTTTCTTCTGTTGCTTC 56656 30 100.0 36 .............................. ATGGTTATATATTCTTTGTAAGTAGTAGTATATATT 56590 30 100.0 34 .............................. ATAATTGAAAGGTGGAATTAAATAATGATAAGAT 56526 30 100.0 34 .............................. ACTAAAAATGTAAATACACCCCCCACATTACGAC 56462 30 100.0 34 .............................. TCAAGAATTTACAGCAGAAAATCTTGAAGAAGCA 56398 30 100.0 36 .............................. TTAACATTAGCTGAAACTCCCACAGCTAAAGCAATG 56332 30 100.0 35 .............................. GAATAATTTAAATTTCTTAATGCTTGAGGTATTAG 56267 30 100.0 37 .............................. GTTAAAAAGATTACAAAAGTAGGAGTTTCAGAAGACT 56200 30 100.0 36 .............................. GTTATGTTTTTCTCCTCTTGGTCTTGTGTAGTTTCT 56134 30 100.0 36 .............................. CTATATAAATCCGTTGGGAAATTTAAAATCTTTTCT 56068 30 100.0 34 .............................. AAGTTAATTATTGCTTTATCTGGGGGGCTTTGTT 56004 30 100.0 35 .............................. TGCCAAAGGAAATCACTAGCGGAGCAAAGTATGTA 55939 30 100.0 36 .............................. GCAATGCTTGGTATAGCAAGTGAGAATGATGATGAC 55873 30 100.0 36 .............................. TAATATTTATTTCTTTGTTGTTGTCTCTCTTCCGCT 55807 30 100.0 34 .............................. TTAAGTCTCCAAATGCTACTTTACGTTTTGTCAT 55743 30 100.0 37 .............................. TATTGATGGAAGAAAGTATAATTCTTGTAAGGCAGAA 55676 30 100.0 35 .............................. GTTAAAAATAATTTAAATGATTGGAGAGATAGAAA 55611 30 100.0 36 .............................. TTATCTTTAGTTCCTCCGATTAACACTTCTCCAGTT 55545 30 100.0 36 .............................. TATTAATACACTTACCTAACTGCTCATGCTTACTTC 55479 30 100.0 36 .............................. TTTGATTATCATATGAGAATAGAGTGTTATAACCCT 55413 30 100.0 36 .............................. ACGCTTAGTATCTTTACACTCATATCTTTAAACCCC 55347 30 100.0 36 .............................. TAATCTGTGTATCTATTTTGCATAAAACTAAATTCC 55281 30 100.0 35 .............................. ACATATCTTATATTGACATCTTTAACTACGGTTTT 55216 30 96.7 36 ......T....................... TTTGATTTATAGTAACAATGAATTAAAGCAAAAATA 55150 30 100.0 36 .............................. CTTCTTGTGTGTCGCTACTATCTGGCATGTAGAAAC 55084 30 100.0 37 .............................. TGGTCAACCAGGCACAAGGTATGCATGAAGAAATAGT 55017 30 93.3 0 ................A...........T. | ========== ====== ====== ====== ============================== ===================================== ================== 47 30 99.8 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TCACAAGCTTTTAGTTCTTCTGCCATTATTTTTGAGAGTATGGCAAAAATAAATTTGCCATACTCTTGCCATACTTTATTAAAAATAAGATAAATATGAATATAATTTATTAAATTATAAAATATGCATTAAGTTAGTAATATAAAGGCTTTATAATACAATAAGATATTATAAAATATAAAGTTCTTAGAATACAGAACTCGGCTTATAGACTTGCTCGTACCAGTAAAATCAATGCTTTGGGAAGATAAGAAGTGAAAACTTCCGACATTCTTCCAACATTGATTTTTTTATTTATAATAGATTAATAAAGTAAATAAAATTTTACCAACCTAACTTTAAAGAAAACTTCACGCAAACCATTGAAATATCAAGGTTTCTGTGAGGTTTTTTATTGCTTTTTTTAAAATTACAAATCGGTTGGTAAAATTTTAAGAAAAGCCTTTAATTTCAATGGGTTTAATGATATGATAAAAATAAGAAATGGCTTGAATGCAGTA # Right flank : TTCAGTCACTTTCCAATAAATATTTATAAGGTAAATGATGTATAATAGCAAAAATTTTGAGTTAAAGATTATTTTTATAATGTGTATACAAATAGGAATTTGAAAGGAACATTGATATGAGTATATGTAAAGAGTGTTATAGCGAAGAAAGTCGTATTACTCCATTGTTAAAACCACGAGAGTGTTTAGAAAATCATAAACAATATGTTTGTGGAACCTGTGGCAGATGTATTTGTATTGATAAAGATGAAAAGCGAAAGGTACAGAGGTGGAATTTCCCATTTAAATCTCTAGAAATAGCAAAGCTATATTTAAGAACTGCTGATTTTACAATGAAAAAGCCTTGTGGAATTTATGAATTAGTTAATAGTAAAGGTAGAAAATCATATAAAATATTTGCAAGTATTGAAGATTTAAAAATATATATTAGCAACAATAAAGATAAAAGTTGTGAGTTAATGGAGCCTATTTATATAAAAGAGAAATATAAAGATTTTCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //