Array 1 16555-17237 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK211298.1 Ruminiclostridium cellobioparum DSM 1351 = ATCC 15832 T344DRAFT_scaffold00031.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 16555 28 100.0 38 ............................ ATTTAAGCAAATATTTTAATACGAGGAGGTTAACTTGG 16621 28 100.0 39 ............................ ATATCCTCCGTCGGGGAATGAATAAATCGAGATATCGGG 16688 28 100.0 38 ............................ TTGTCAATATCTGTGATCATAACGTCCAAAACCGGAGT 16754 28 100.0 37 ............................ GTGAAAAAGTCAGAACAACTGACTTTGGATATATAAG 16819 28 100.0 38 ............................ CGGATTATCATTGTCAGTTCCATATGTTCCTGGGACGT 16885 28 100.0 37 ............................ ACCACGACCACGACCAGTACTACAATTAGCCACCCAT 16950 28 96.4 36 .............A.............. GCTCTTGATGGGTGCCCGTTGCGGGCCTTGTATCGG 17014 28 96.4 38 .............A.............. AGATCAGGCGTTTCGAGGAACATTGCCAGCGGCAGGGT 17080 28 89.3 38 .......C.....G.T............ TCACAAAATACCCTTGCTTTTCTAGGGTTAGTTCTGGT 17146 28 96.4 37 ...........T................ ATGGGAAAGAATGACGGTGGCCCGGACGGTTTGCAGC 17211 27 75.0 0 ..........T..A.A...-.GA....G | ========== ====== ====== ====== ============================ ======================================= ================== 11 28 95.8 38 TTTTATATAAACATACTGGAATGTAAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT # Right flank : GTTTGCTCAAGAAATAAATCCTTAACCGGAGGGAATAGTAAGGTTTTATTTGAACTCATTTACCTATTGTCAATCAAATAATCTTCTCAAATAAATAAACATTCCTACCATTTAGGTACGTATTTGTACCGGCAGATTCCGTAAACTAAAGATTCGGCATAGTATATAGGAAAAAGTTGTCATAATAAGTCAATTTAACTAAAAAACAGTTTCAATTTACCTTCTCTGGGTATATAATCTAGGAGTATATACAAGTTTACGTAATAAGTAGAGAGAGGTGCTAATGTTATGTTCAAAAACATGAAAGTATTTAACAAGGTATTGGTTATGGCTGTTTTTTTCCTGATATTGCTGTTAGGCCAGGGAGCTGTATCCTATTACTTCTTGAATGTGGCCAATTCCGGTATTGACAGTTTATACAACAATTATCTTAAGGGTACGGAATACATAAATGACATAAGAGCAAATTCGCGGGCTAATGAAGCGAATTTGCTCTATAT # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTATATAAACATACTGGAATGTAAAT # Alternate repeat : TTTTATATAAACAAACTGGAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 8665-8230 **** Predicted by CRISPRDetect 2.4 *** >NZ_JHYD01000010.1 Ruminiclostridium cellobioparum DSM 1351 = ATCC 15832 T344DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 8664 33 100.0 35 ................................. TGTGACATTTCTTTCGTTTGACGTAACTGTTTTAG 8596 33 100.0 34 ................................. GACACAGGTATGGTAAGGCCTTTGAGAGTATCAG 8529 33 100.0 32 ................................. GGATGATTCGCACGAAACGTGGTTTTTTTTAT 8464 33 100.0 34 ................................. GACACAGGTATGGTAAGGCCTTTGAGAGTATCAG 8397 33 100.0 32 ................................. GGATGATTCGCACGAAACGTGGTTTTTTTTAT 8332 33 97.0 35 ................................C AAGAGCTGATTGTAGTTGCTGGGAAAATTGGCATT 8264 33 84.8 0 ....T.............G..A..T..A..... | C,C [8234,8242] ========== ====== ====== ====== ================================= =================================== ================== 7 33 97.4 34 GTCGCTCCTCTCGTAGGAACGTGGATTGAAATT # Left flank : TTGGAGGATGCACAGCAAGAGAATATAGGTGAACAATTAAAAGTGACAATCAGAGATAGATACTTTATACCTGCATGTACGATGCCTGGAAGTGTTTTTCCAATATTAATAAAGTTTTATATACATAACCATAAATATAAAAAAGGAATGGATTTTTATATATGCAAAATTATAGATATGCTGGATATGAAGAAAAATCCGATTCCTGCTCATTTGTCACTTGAAGAACAAGGAGTTTGGATTTTGGGGTATTACCATCAAAAAAGTGCATTATGTAAAAAGATAATATGAAAAATATAAAAAGATTAATGCCCCTGCTAAAATAAGGTGCGAATGTGGAGAGAACATTAAAAGCTAAGTACATTTGCACACCTTATTTTAGCAAAAGTTTGCTGGATTTTATATCATATTCATAAGAAGTATTTTGAAAACATTGATTGATTATTAAAATATTGTATAATTTGTACAGTTTAAATTAATACTTCTTGTTTACTTTTGCT # Right flank : AAGTAAATCAAAATTAGCATATACTGTGAATTATTTAAATCAAATTGATTGATTTGTAAAAATAACAGTATATAATAGGAAATAAGTAATAAATTAGTATATTATTATAATAATTCACAGGAGAAGGCTATGTTTATTGCTCATATCAGAAAAAACGACGGAGTTAGACAAAGTGTAAAGGAGCATATTGAAAATGTATCGCAATTGTGTTCAGAATTCTGTAAAAAAATTTCACTCGAAAATACTGGAAAGCTAATAGGGCTTCTTCATGACATGGGGAAGGGAACCGAAGCCTTTAAAGTATATATCATATATTGTTTCCTCAACCCGGAGGACAAGTCGCGGAGAGGTTCTGTAGACCATGCTACCTCAGGTGCAAAATTTATCTATGACACTTTTTTTAGTTCCAAAGATTCTTATGAAAAGCTGGCGGCTCAAATTATAGCTTTGGCAATATGTTCACATCATGGAGGGCTTATTGACTGTATTGATATGAACTT # Questionable array : NO Score: 5.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTCGTAGGAACGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //