Array 1 37684-38969 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JABDID010000004.1 Streptococcus equi subsp. zooepidemicus strain A02199501 STREP_ASSEMBLY_contig_4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     37684	    32	 100.0	    33	................................	GTACAAAATAGTGTGTTAATATAGTATCATAGC   	
     37749	    32	 100.0	    33	................................	CAGAGATTGATATCCAAAAAACAAAATCCAATG   	
     37814	    32	 100.0	    35	................................	CTACCAAGATATTTGTAACAATCTTGGAATGGATT 	
     37881	    32	 100.0	    34	................................	CTGAAGCAATAGCTAACAATCCCGCTTTACAATT  	
     37947	    32	 100.0	    33	................................	AAGCTTTTATATGGCTGATAAACTGCTTGGAAA   	
     38012	    32	 100.0	    35	................................	AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAA 	
     38079	    32	 100.0	    34	................................	ATTGCTAACACTAGTAAAATTACCTCGTAGTGTC  	
     38145	    32	 100.0	    34	................................	ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG  	
     38211	    32	 100.0	    35	................................	AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT 	
     38278	    32	 100.0	    34	................................	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA  	
     38344	    32	 100.0	    34	................................	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA  	
     38410	    32	 100.0	    35	................................	AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT 	
     38477	    32	 100.0	    35	................................	ACTAAAATATGCAAAATAATGAATAAAAAGGAGAG 	
     38544	    32	 100.0	    33	................................	AAAGGAAGATGAGTACTTGGCTAGACGACTTAA   	
     38609	    32	 100.0	    33	................................	CTAAAGAGGTGACGGAATGAATAAAAGCGAAAT   	
     38674	    32	 100.0	    34	................................	TCAGAAACAAATAGCTGAACAAATGAAGATTTCC  	
     38740	    32	 100.0	    33	................................	GTGTATCGCAGACATGCATTGCCTTGCGTTTCG   	
     38805	    32	 100.0	    33	................................	TGCGAGATTAACTTACTGCACATGGATTTTATC   	
     38870	    32	  87.5	    36	........C..TGC..................	CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC	
     38938	    32	  84.4	     0	........CCAT.C..................	|                                   	
==========	======	======	======	================================	====================================	==================
        20	    32	  98.6	    34	GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	                                    	       

# Left flank :   TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATATGGAAATGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCTTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATTACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA
# Right flank :  TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTGTCATGTTCAAAGCAAGCATAGATAAGTTTCTTGAAATTGTCAAAATTTATGTACCTAAAAGCATTGCATTTGATGCCTTTGATAAATTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATTAAGGTGTTCAAAGCTGTTTTGAAGGGGTGATTGAGATGAGGCATAACTCAAAGAAGAGCTCTGTATTCTTTTCTTGCAAATGAAAAAGAGGCAGCTGATAAAGGTCATAATAGTC

# Questionable array : NO	 Score: 9.19
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.40,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : NA
//