Array 1 18339-17090 **** Predicted by CRISPRDetect 2.4 *** >NZ_NLYZ01000013.1 Escherichia coli strain MOD1-EC6370 MOD1-EC6370_13_length_108723_cov_36.6134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 18338 29 100.0 32 ............................. CCAGGGTGAGCCAGCGCCGCAGGAAGACACGC 18277 29 100.0 32 ............................. CGTTCCCAACGCTGAATATTGCTGGCATAGCC 18216 29 100.0 32 ............................. GAGCGTAGAGATTCTCGAAACCGATCCGGACG 18155 29 100.0 32 ............................. GAAGTTGCGCGCACTAAGAAAAACAGGTTCGA 18094 29 100.0 32 ............................. CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 18033 29 100.0 32 ............................. TCATCGAAAACCAGCGGATCGAATGGGACGCC 17972 29 100.0 32 ............................. AGACGGCGCGTAAAACTCATACGGCGACAAAT 17911 29 100.0 32 ............................. CTCGCGGGCGTGGAATTTAACGAACGGTTACC 17850 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 17789 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 17728 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 17667 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 17606 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 17545 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 17484 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 17423 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 17362 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 17301 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 17240 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 17179 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 17118 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 21 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //