Array 1 4380-383 **** Predicted by CRISPRDetect 2.4 *** >NZ_QIBX01000011.1 Slackia equolifaciens strain DSM 24851 DSM24851T_contig_011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 4379 33 100.0 33 ................................. TTTGGTTGATTGGATTCGCGGTTGTCCATGGCG 4313 33 100.0 35 ................................. ATCGACCGTTGTTTCGGGGACGGGATCGTCATTCA 4245 33 100.0 34 ................................. ATGGGCGTTCCCCGAGTCCGTTACTGGCTCTCCG 4178 33 100.0 33 ................................. TTTCGACGGAAGAACGCGATTCATGAAAGTCTG 4112 33 100.0 33 ................................. ATGCTCAAGATGATGTGCGACTGGTCGAACGGG 4046 33 100.0 33 ................................. TATGACTGCATCGAATGCGAATGCGGCGAAGTC 3980 33 100.0 34 ................................. CAAGCATGAGGCTGATGTCAGACAAGCGCAAGGC 3913 33 100.0 33 ................................. TTCCACTCGAACACGGACACGGCCAGGTCGTAC 3847 33 100.0 35 ................................. ACAGGCGACCGAAGCGACGCACTCGTCTACGAAAG 3779 33 100.0 34 ................................. TATCATATCCCTAAATATCCCTAATGTCCGCTAA 3712 33 100.0 35 ................................. TCAAGGCCCTCTATCGGATTGAGGCCTTCCTTCTC 3644 33 100.0 35 ................................. TGGGGACGCCCACTCGCTCGAGGAAGGCGCCCTAT 3576 33 100.0 35 ................................. CGGAGTCGGTCATGTTGACGTCCTCCACCACGGTC 3508 33 100.0 34 ................................. TCCTCGGAAAGCTCCTCGATCGCGTAGGGCGAAA 3441 33 100.0 34 ................................. AAGACGCTCATCGAGGGCGCGGATCTCCCCTTCG 3374 33 100.0 35 ................................. TTTCCTTGATGCCCACGCTCCGTCCTTTCTCTTCG 3306 33 100.0 34 ................................. CGGCGAGGTTGTTCGACTCGACCAGCTCCATCCT 3239 33 100.0 33 ................................. TTGACAACCACGCCGAACTTCACGGACTTCGCA 3173 33 100.0 36 ................................. TCGGGCATCAGGTCGCCTTGCGACACCAGGATGGAT 3104 33 100.0 35 ................................. AACGCCTTAACTCCTCCAGTATCGTTCATTAGGCA 3036 33 100.0 34 ................................. TATACGATGCATCCAAGCATGCCATTTTCTCCAG 2969 33 100.0 35 ................................. CGAGGACCCCCTCTCCCTCCCCGCGCAGCAGCTCC 2901 33 100.0 35 ................................. AACGACCAGGTGTTGCAGCGCATCGACTACGAGAT 2833 33 100.0 35 ................................. AACGACCAGGTGTTGCAGCGCATCGACTACGAGAT 2765 33 100.0 33 ................................. TCGACCGCCCCGTTCGTGGTGTCGATGGTGTCG 2699 33 100.0 33 ................................. CTGCCAGGTCTTCGTTTGGTCGTGAGCGCCTGC 2633 33 100.0 36 ................................. GGAGCCATAAGCGCGGCAGCAGCTGGACTGATTGGC 2564 33 100.0 35 ................................. CCCGCCTACACCGAGTGGCTTGAGGAGAACGTGGA 2496 33 100.0 34 ................................. ACGGCAAACGGCTCAAGCTGGAGCGACGGCAAAT 2429 33 100.0 34 ................................. ATCGCCATCGTATGCAGTTATATACAACCGCGAA 2362 33 100.0 35 ................................. AAAGTCTGCGAAGCTATGCCCGTGGAATCCTCGGC 2294 33 100.0 33 ................................. TCGTTCTGACAGCTCCCATACGTGAGGCTTAGC 2228 33 100.0 35 ................................. CTTTGATGACCTCCTCGCCTTTCATGGCTCTCCTC 2160 33 100.0 34 ................................. TCGGTCGATGCGGTTGTTGTCGTGGCGGACGTTC 2093 33 100.0 33 ................................. TCGTACGCTATGCGCGCCACCATGGCCTTCAGC 2027 33 100.0 33 ................................. TCACGTACGTGATCGCGGGCGGTTCGAACCTGC 1961 33 100.0 34 ................................. ATGGAGCATCGAGTGCGAGATAGGAGAGGCCGTC 1894 33 100.0 35 ................................. TACGCGGGCGATGGGCGGATGTACGCCAACGAGCA 1826 33 100.0 34 ................................. ATCCTGCACGGAGTGCTTCCGGACGGAATGAGCT 1759 33 100.0 34 ................................. ATCTCGGCGATGAGGGCGTTGTTCACCTTGCGGT 1692 33 100.0 34 ................................. AGGCTTACGGCATCAATCGCGGATACAGCGACCA 1625 33 100.0 37 ................................. ACTGACATGTTGTCGTTTTCTGCTAGGCTAGAGCGAT 1555 33 100.0 35 ................................. TTCGACGGCCACGAGCGCTGGCGCGACACGGAGCC 1487 33 100.0 34 ................................. CGACGAATCAAGTCACACTGCCGCCGCGAAGGCC 1420 33 100.0 34 ................................. AAGAGCATCGGCGTCACCGATGGATGGCTCGAAG 1353 33 100.0 33 ................................. CTAGCTGGGGAAACTCTGATGCCAGGCCGTACA 1287 33 100.0 33 ................................. TACTGCAGCCCGCCCATCGGCGGACCGTGCTCG 1221 33 100.0 34 ................................. TCCGGAAAGCGGCGAGTGCAGGGAGGTCGACTGC 1154 33 100.0 34 ................................. TATGCCAAGGAGCGCTTGTGTCGTTACGCGCCGG 1087 33 100.0 35 ................................. TTCCTGCGCATGAGCGCGTCCAACTGCTGGGCCGT 1019 33 100.0 33 ................................. AAGCACGTGGTCGAATGGGAGCGGGCGAACGGC 953 33 100.0 36 ................................. TGCGTGATGCCGGTCGGGATTGCGCCGTACTTGCGG 884 33 100.0 34 ................................. TCAGGCATCTCCGGCATCGTCACGGACGCCCTAA 817 33 100.0 34 ................................. CGCGTGCCGTAGCGCTTCGGGGACCGGAGCCCCT 750 33 100.0 33 ................................. TTGTGGAGAAGTACGGGGAAGACCCAGAAGCAG 684 33 100.0 33 ................................. GTCATCGACGAGGCGGAGCGCGCGGTGCTCGGA 618 33 97.0 34 ....................T............ GAAAAGATAGCCACCATGATTAAGCTGAACGACA 551 33 97.0 35 ............A.................... TGCGTGTACGCCCACGCGGGGCTGGAGGCGATAAC 483 33 93.9 35 ............AT................... CACTGCCCCGAGGGCTTTTTGTACCCGTTGGGCGA 415 33 75.8 0 .....G...T..A.....C...C.T......GC | ========== ====== ====== ====== ================================= ===================================== ================== 60 33 99.4 34 GTCGCACCCCGCGAGGGGTGCGTGGATTGAAAT # Left flank : CGCAGGTAGGTCAGGCGCTCGTCGAGCGTGCGGAGCGTGGCGTCGTCCATGCCGCCGGTGGCCTCTTTGCGGTAGCGCGCGATGAACGGGATGGTTGCCCCGCCGTCGATCAGGTCGATGACGGCCTGGATGCGGGCGGGCGCGATGCTGAGCTCGCGGGCGAGCGCGGTGATGATGTCCAATGGTGCTCCTTCGCTGGTGGTGCAGATGCGGTGTATCCGCAAATTGCGTCGCGATGGTTTTGAGTCTGGAAAGTGGATGCGACGGGATATTATAGAATGCGACAGCCTTTCGACGGCAAAGGAATGAGTTGCTGTGCGGGAATGTTCAAATTTGGTCAAATGCGAACATGGGGCAATCATGCGCGATGCGTGAGGTTCGCACCTTGCGTAGGAGCAGAGAGGTTGGCAGGGGAGCACATATCGACCCAAGTGAAGCGCTTTTGCTTCGTCGTTTCCGATATTTTGTAAGGCATGCATTTTTCTGTACAATATACTGCG # Right flank : CAGCACGTCGGTGCCACCTATGCGCCGCGGTTCGGGAGGCAAAGGGATGGTCTATCGATCACGCCATGGCAGAGTCGGAGGATATGCTGTGCTCGGTATTGCGGAGGCGTTTCGTAAAGAGTGTGTTCGGCATGATGGAAGAGTCCTGCGCCTTCGTGATTGCGGGAAAGATGGCAAGATATTAATGCGGTACATATGATTGATGCCATACGTAATATGCGTTTGAGAAAGAATGCTTAACCCATGTACCTTTTATGCGTTGTGTTAGACCGCTTTGGATACTGGGACTTTTCCTATAATCTTTCTTGCTTAGATAGCAGGCGAAAGCGAAGGAGCTCCTATGGTCACCAAGGATGATGCGTGTTGGATAATCGGCCTTTCCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCGAGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //