Array 1 1012734-1015749 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP079821.1 Streptococcus rubneri strain LPB0404 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1012734 32 100.0 35 ................................ ATGATTGAAAACGTGGTGTATAAACTATACGGCCG 1012801 32 100.0 33 ................................ ATAGCAAAAAGGAGTTTGGGGTTTTGGTTAGTA 1012866 32 100.0 34 ................................ TTATGCTAGGGGCGAAAATTACAGCATTTTGACC 1012932 32 100.0 34 ................................ AAAACCGTTCTGCATTGCGTGAAGCCCGCGACGG 1012998 32 100.0 34 ................................ AAGAGTTAATTGCATTGGTTTGTTTTGGCCATCT 1013064 32 100.0 34 ................................ ATGTTACCAGCAGCATCCGTATAGCTCAAACCAA 1013130 32 100.0 34 ................................ AGATAGTTTGCTCCGATTCGTGATAGTTGCGGCC 1013196 32 100.0 33 ................................ TACAAGCCCTCAGAAACGACCATAGAAGAAACC 1013261 32 100.0 36 ................................ TAATTCCAACTTTTTCCTTGTTCATTTCCAGCCATC 1013329 32 100.0 34 ................................ TTTCGCTTCTCGACTTAAATCAGCGCCTGCTCTC 1013395 32 100.0 36 ................................ AAAGATTATGGCGAGCGATGGCGCCCGGTGGCCAAA 1013463 32 100.0 35 ................................ CCTTGTGACTGTACCCTTGGTTACATTAAGCTCAC 1013530 32 100.0 33 ................................ AATCCAACCAGTTTGAAGGTCAAAATTGGTCAC 1013595 32 100.0 34 ................................ CGGGTATGTGAAAGACCTTTGGGAACAGCGTCAT 1013661 32 100.0 34 ................................ TTTTACCATGATTTCATCCGTTACCGTGGTAAGG 1013727 32 100.0 33 ................................ CCACTTTGCGATACATTCAAAAACAGCATTCAT 1013792 32 100.0 34 ................................ TGCAAAAAAATAAAATAAAAAAAGTCTAGCATAG 1013858 32 100.0 34 ................................ AAAGTCCCACACATCATTGAAGCATTCGCTACAA 1013924 32 100.0 35 ................................ TTATGAATAATGAAGTAATTAATTTAAACCAGCTT 1013991 32 100.0 34 ................................ GCGTTTGCGAAATGGGAAGAAGCGCTTCGGGGAT 1014057 32 100.0 35 ................................ ATCTTAGATCTTGAAATTAAAAATAACAAAACCAT 1014124 32 100.0 35 ................................ CGTGATAAAGAACAAGGCGAGTACTTGCAAAAATT 1014191 32 100.0 35 ................................ TTTTGTGGTTTTGGAACTCTTAAAAGAAAAATAAC 1014258 32 100.0 34 ................................ CATTGTGTTCTGAATAGATTTCAAATGCCTTGTC 1014324 32 100.0 34 ................................ TTGACGATCCGCAAAGAGTACCGCACGTTGGATA 1014390 32 100.0 34 ................................ TCAAATGCTTCGATGACATCTGCTAATGTAATCA 1014456 32 100.0 34 ................................ GTTTGTGCTGTTTATTTTCACCTTGCATAGAACT 1014522 32 100.0 35 ................................ ATAAATTTATAGTGTTTCCGGCCAAGGATCGTCAG 1014589 32 93.8 36 ............................C..A TTAGTCTGAAATAGAGTGCTGAGAGGAAGAATCTGA 1014657 32 100.0 35 ................................ AATATACGGGCAATCCCACCGGCTGGTCTGGTATG 1014724 32 100.0 34 ................................ CGTCAAGGTTTTATCCGCGGAGATAGCCCGCAAG 1014790 32 100.0 34 ................................ AATCTAAGCAAGCAATGGAAGCCTATGGGCTATC 1014856 32 100.0 33 ................................ ATAGCAGAAAAACTCTTATCTGTATTTCCGTAA 1014921 32 100.0 36 ................................ AAAATCATCAAAGAAAAAATCTATCCAAGGGATGAT 1014989 32 100.0 34 ................................ AAGCTCTACTGCTAAGGACGCGATAAAGAGCCAA 1015055 32 100.0 34 ................................ TCAACTCTGGGAACCTCGCCATCTCTACCTTGCA 1015121 32 100.0 34 ................................ ATAACAGTGAAGCCATTTGCTCTATCAACGCTGA 1015187 32 100.0 34 ................................ GGGGTATTTAAAGCCTATGAAGTGACAATGGATG 1015253 32 100.0 34 ................................ TTGGATGATTTCAATCTTATTTACGACCCAACTA 1015319 32 96.9 35 ...................C............ TTGATAGACAAGAAGAACTAGGTCTATACAAAGAA 1015386 32 96.9 34 ...................C............ AGAATAAACTCCGTATTCCATTACTTTATTTTTA 1015452 32 96.9 35 ...................C............ TTAATATCCAAGTTGTAAGGCAATCACAGGAAATT 1015519 32 96.9 35 ...................C............ CGTAAAAAAGGCGACAAAACTGCTGCGGCTAAACT 1015586 32 96.9 34 ...................C............ CCAATGCTTTTCCATTCTCTTTTCTTCTGCTTCT 1015652 32 87.5 34 ............AT...G.C............ TTGAATTGTTTAGATTTAAGGTCCACCGTAGTAA 1015718 32 84.4 0 .......T....A..T...CA........... | ========== ====== ====== ====== ================================ ==================================== ================== 46 32 98.9 34 GTCGCTCCCTTCGCGGGAGTGTGGATTGAAAT # Left flank : CAAAAGCTATTCGTGGTGAACTAGAGTCATATCCACCTTTTATGATATAGGAGTTTATATATGATGGTACTGGTGACATATGATGTCAATACTGAAACAGCAAAAGGAAGGAAGCGTCTACGCCATGTTGCAAAACTGTGCGTTGATTATGGCCAACGTGTTCAAAATTCAGTATTTGAATGTTCAGTTGCTCCTGCAGAATTTGTAGAAATAAAGTCTAAGTTACTAGATATTATTGATCCTGATTCTGACAGTATTCGATTTTATTTCCTTGGAAAAAATTGGCAAAATCGAGTGGAGACTATTGGACGCGATACAAGTTATGATCCTGATATAGGAGTATTAATACTTTAAAATAAATAGTGCGAATCGGAGTTGCTCATAAAAAAGCAGGAGTTTCGCGCAAAAAACTTGAAAAATTAATGGCAAAATTGAATTTTAGGGAATAATAATTCCTTTGAATTAATCAAATTTAGCCAAAAACGGTGCAACTTTGCGCT # Right flank : TAATATCTTCATTTTTGAATGAAGTTGAACCAGCATTCGCAATTTCCGTATCCATTTATTGTTTTTTTAAGTTTTTATTGTTACAATAACCATACAGACAAAAAGACTGGATTTCCAGCCTTTTTAATTGTTTTAAAGAAAGGTTTTTTATGAAACGCAAATCGATTTTGTTTCTATTTTTATTCTTGCTCTCCATTGGTCTAGCCTATGAGACTCAGTCTATCACAGCTGGTTGGATGACTGGATCCCAGTATGGGATCATTGGTATCTCTGTCCTCTTGCTCTTAGTTTATGCGATTCCTGCTGTTTGGGCTCTCTTTCATTTCGCGAAGAAGTGGAAGTTGTCCTGGATTCCGGTCCTCTTTTCACTTCTAGGTGGCGGCTTGATCGCAGGTTGGTTGTCTAGTTTTGCCAATACCTATTTCCATGAGATGATTCAAGCAGTAGCGCCTAATAGTGATTTTTGGAATCAATATGAGAGTGCTATTGCAGGGCCCCTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //