Array 1 159133-159640 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANN010000001.1 Vibrio metschnikovii strain M3X Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 159133 28 100.0 32 ............................ GATTCAATAGCTGGATTGACTGAGAGTGTTGC 159193 28 100.0 32 ............................ AAGTGCACCAGACTACGTCCTCACAGGTAAAG 159253 28 100.0 32 ............................ AATCTGAGGAATGTCAGAAGGCAAGCGAACTA 159313 28 100.0 32 ............................ TTTGCGCGTCAACCATTTCTTTTCTTAACTGC 159373 28 100.0 32 ............................ AGACAAGGGTGGGCGATAGACTTGCTCATTGT 159433 28 100.0 32 ............................ TGACTGGGGTCAGATTGATACGGCCATTCGCG 159493 28 100.0 32 ............................ TTGCCGGAACCTTTTCTAAAAGTTCATCTTGA 159553 28 100.0 32 ............................ GTTTACGCATTGATGAACATCTTACTTGATCA 159613 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTGTCACGTACTTTGTCTAAGTGTTTGATGATGAAAATTTCGTTTAACCAGTCGTTCAGACTGAAAGATCTGAACGATAGAATACCTAAAAGTTCAATACCGGGTGATCTCAGCTAAGCGGCGCAATTTAAGCAGTGCAAAGCTGCGGCGTTTAATGGCTCGAGGTAGTATCAATAAAGAAGGTGAGCAGCGCTATAAAGAGAAGATGTTAAATCAGAGCATTAAAGCACCTTATCTTGACCTTCAGAGTAGCTCTACAGGGCAAAAGTATCGTAAATTCTTTGAGTGTGGTGAAAAGCAGCCACTGCCAGTATCCGGAAAGTTTGATTCCTATGGGTTAAGTCAGACTGCGACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAGGTTACAATGGGTGGTTTTTTATAAGGTAAAAATGCGATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGGCGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 105606-105753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANN010000010.1 Vibrio metschnikovii strain M3X Scaffold10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 105606 28 100.0 32 ............................ AATCCAGAAATACTCATCAACATACACATGGC 105666 28 100.0 32 ............................ CGTCTCCGCCGGAACAAACCCGCCTTCTATCT 105726 28 96.4 0 ..................C......... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGAGGTAACTTACGTCAGCTTTGTACGCAAGCAGGTGAAATCACCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCCGCGCTATGGGCCGAAAAATCCGGTAAAACGCTGGTGGAATGCCTAGCCGATTTGCAACAAAGCAAGCCGACAGCCTTATGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATT # Right flank : AAGACAGAATCAATCCAAGCGTCAATTAATAAATTCATTTTGTTACGGAGTTAGTATGAATCAAATTAATCCAGCCAAATTACGTAATAGTAAGTGGACGGCGGTCAAACCGATCAACCGAGAAAAGCACTTTTTGGTATCAGATATTGAGTATGATGAAGATGGTTCAGTCGTTTCATGCTTAATTGAATCTGTGCTTTCGAGAAAAGAATATTCCATTGATTGGCTTGACCTTAAAAGTGAAGAAAAATGGCTTCAAGGTTGGAAATAGGGGCTCCCTTGGCGACACGCCTAAACTGCTTCAGGAGGATGTACAACGCGTGGCATTTTCGTTATGCGCTATATTTACCGTCAATGGTAACAATGGGCAATGCCAGACGATCACTCGCGGCTAATAATGGTTGTAGGGCATCGATAAGTAACCATTCGCTAAAACCTTTGCCTTTGTAGCGTTCATCGATGGCTAAATAAGCCATGGGTCCGCCAGACGTTGATGATGG # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8111-8738 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANN010000032.1 Vibrio metschnikovii strain M3X Scaffold32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8111 28 100.0 32 ............................ TTTTCAAGCTCCTGTTTCTGACCCGACAAGGC 8171 28 100.0 32 ............................ AATCAGTGGGGTTAGCGTTGACTGCTTGCGCT 8231 28 100.0 32 ............................ TTTTCTTACGTCTGTTAGCATTTGTGGGCTTA 8291 28 100.0 32 ............................ AAGAAGACCAGTCAGAGCTAAGCAGCAAAGAG 8351 28 100.0 32 ............................ TTGAGCCATTGGAACGATTCGCAATCGAGATG 8411 28 100.0 32 ............................ CAACGAATTGCAACCCAAGCAAGACCGCGAAT 8471 28 100.0 32 ............................ GAGTAAATGGGCCAATCTTCTACTTACGTTGT 8531 28 100.0 32 ............................ TTTTGCAAAGGGTATCTTTGCCCGTATCCGGT 8591 28 100.0 32 ............................ ACGAATTCGTCACAGGTTAATTGGCTTGAGAT 8651 28 100.0 32 ............................ TTCTATATCTTCAATGGCATTACAACGAATTT 8711 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAAGTTTGAAGGTCAAGGTTATATGACCGAAATACTCGAAGCATCGATAGGTTACATGTTTGATATCGTTGGTCTTAACCGAATAATGGCGACTTACATGCCACATAATGTAGCGAGTGAAAGAGTGCTGCTTAAACTAGGTTTCGAGAAAGAAGGTGTCGCTAGGAAGTACTTAAAAATTGCAGGACAATGGGAAGACCATATCCTTACGTCCAAAATTAACGAACGCACATAACAAAGCGTTTAAGACGGATTCACAACGCTTGGCATTCTCAGTTTGCTTCTGCTTAAGTGTTTACGGCACAATGCTTTAGGCCGGGTGGATGCGTTGTTCACCACTTAACGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATA # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTATGTGATTGAGCATAAACAAAAACAGCCCTTCTGGTGTGGGCTGTATTATAGATGGTGAACATACTAGTGTTCAGGCATTTCTATTATTCTAATCGCGCTATCTATTGCTTTAGTGAAGTCTCTGCTGTTTTCGAGTTTTCCAGAGCTTGCTGGTCCTAGAACGCAAGAATACAAAGCGAGTTGTTTCTCGAAAGACAAATCCAGTTGTTCATACAGAAGTTGCCGAGTTTCAGCATGTTGTTCTGGTTCTTGGTTTGTAAGGTTGATTAAAGTTTCAGAAATAAGCGATTTCATATGATTTTTCCTTATTATGGTGTTGGGTGCTTATTGATTATATCGATAAGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7191-7698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANN010000034.1 Vibrio metschnikovii strain M3X Scaffold34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7191 28 100.0 32 ............................ TAGCCGATTTTGCTTTTTTGCTATGTGTTCCC 7251 28 100.0 32 ............................ GTTTGTGTTACTGTGATTTTGCGCTTTTCTGC 7311 28 100.0 32 ............................ TTTGACGCAACCATCAGTGCCGTAACGCCAGC 7371 28 100.0 32 ............................ AAGACGGCCAGCTAGAGTGAAGCAGCAAAGAG 7431 28 100.0 32 ............................ TCTTATTAGTGTTTTGTTTGTGATATAAAGGT 7491 28 100.0 32 ............................ TCCATTTTGTCGAATGATAGCGCCTTACCGTC 7551 28 100.0 32 ............................ TCTTCGCTTTTACACCAGTCATTAAATGCTAG 7611 28 96.4 32 T........................... CGTTAAAAGCGGGGTAATGGTTTTTTTATTTA 7671 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTAAATACACTGCTTGTATAGCGGTTTCACATGCGCTACCTGATGCGAACAAACGCACAGGTTTGGCTGTGGCACTTGAATATTTATCACTTAACGATTTTGAGCTTACGCAGGAAAACGATTTACTTGCGGATGCAGTTCGAGATCTTGTTATCGGCATTATCAACGAAACAGATTTTGCCGACATTCTCTACGCACAATACGCAAAAGAACAAAATTCAGCTCTCTAAACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTTTTACCATGCGTTGGCTTTTGTGATTACGATGTTATGCGGCAAGTTGGTAGTAGCGTTGGCTGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : ATATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATAGCTTACTGTTCATTTTGGCATAGACAGAGATGATTCGATGTTGCAGAGTATGTCATAACTTCATTTAAGAAAGGGAATTACCGTGTTTAGTCATATAATGATCGGCTCAAATAATATAGAGAAATCAAAGGCTTTTTATGATGCCATTATGGCCGTTCTTGGTTACTCGAATGGTTTTATTGATGCGAAAGGGCGCTGTTTCTATCGTAATAAAGAAAGTACTTTAGGCATTACGAAGCCAGTAAATGGTGAATCAGCTACTCATGGTAATGGCATAACGATTGGTTTTAAAGTTAGCAGTCCTGAATTAGTTGATGCATGGCATGCAGCAGGTATAGCGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7607-7814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANN010000035.1 Vibrio metschnikovii strain M3X Scaffold35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7607 28 100.0 32 ............................ TTACTATAGAGGATCCATTAATATGTCCAGTT 7667 28 100.0 32 ............................ TACTTTAGTTTTCACGAGGCTCGATGTGGAGG 7727 28 100.0 31 ............................ CAAACTCGCTCTAATCCAAATCAAGCAACCA 7786 28 89.3 0 ...T.......T.T.............. | A [7809] ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCAATCGTTTCTGCCGAAGTCGGCTTATTGAAACCTCAGCGTGAAATCTACCTATCACTACTTTCTCAATATGATCTCAATGCCGCAGAAACAATATTCATCGATGACATGCTATACAATGTTCAAGGTGCAGAGTCGGTTGGTATAAAAGGAATTCAATTTGAAAGTGCTTTCCAATGTGAGCAAGCCTTAAAGTCATTAGGAGTTCAGCTTTAAGTCGTTGAAATTTCACATAACAAACGCTTCAAGAGGGACTTCCAACGCGTGGCATTTTTATTGTGCGTTGATTTCGGTGGTTACGGTGTTATGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTTAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATACAGTTTCATA # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGTAATGCGGTGAGTTGGTAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTAATCTCATAAAATCAATCGGTTGTGGCCTTTTCTTTATTCCTTCGGCCATTCGATCTTGTTTGTCGGCAATTGGTTAAGGCGGTCGCTGTTTCAATTAAATTGATGCTGTAAATGTCGAGCGGTTGCCTCATTTTAATTTTGAGCCGGTTCGTGTTGAGTTTCTTTTTCTCAAAGTCGCTTTGAGTGATTTGGCTCCTTGGCTTATCAGCCAAAAGCGTATCGGCAATTTGCTATTCTTTTGCGCTGCCTAATGAAAAGGCAATTTCGCTGGCGCTGTTGGTCCAGTGTTGTTGCCTCATTCGAGTTTCACGCCAATTTGCTGTGAATTTGGTTGATGAGAT # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //