Array 1 222301-224185 **** Predicted by CRISPRDetect 2.4 *** >NZ_NAWA01000008.1 Streptococcus agalactiae strain NNB013 119, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 222301 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 222367 36 100.0 30 .................................... AAGGGTGTTAGATGATAATACCTTTTTTAA 222433 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 222499 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 222565 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 222631 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 222697 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 222763 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 222829 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 222895 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 222961 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 223027 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 223093 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 223159 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 223225 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 223291 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 223357 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 223423 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 223489 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 223555 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 223621 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 223687 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 223753 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 223820 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 223887 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 223953 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 224018 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 224084 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 224150 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //