Array 1 66059-63893 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMQI01000024.1 Shewanella algicola strain JCM 31091 sequence024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 66058 29 100.0 32 ............................. CCATTTCTCAGCAAGTCGATATTTACAACACG 65997 29 100.0 32 ............................. TCTAAGTGTGTGGTTCCATGTGGTACTCTCAT 65936 29 100.0 32 ............................. TTTGTTAGCGACAATGATAACTCGAATGCTGA 65875 29 100.0 32 ............................. GTTAAGTACCGCGGCAGAAAGGATAGCGATAT 65814 29 100.0 32 ............................. CATGCTCGTTATACATACTTGCCTCATCCGTC 65753 29 100.0 32 ............................. CATCAACTGAGGCATCTACAACGCCACTAATT 65692 29 100.0 32 ............................. GTCGGAGGTTATACCGGTGAGTTTCCGATTGT 65631 29 100.0 32 ............................. CTGTTTTTTGCATATGTGATTGTTACTACGCT 65570 29 100.0 32 ............................. GCAACTATCAACAGCAAGGTCAGCGCCCACAG 65509 29 100.0 32 ............................. AGGGTACTTGTGCGCATGAACTAGCCGACATT 65448 29 100.0 32 ............................. TCTAGGCCGTAAGCGATAGATAGTACCTGATT 65387 29 100.0 32 ............................. TATGGTACAGCAATTAGGTAACAAATTGAATA 65326 29 100.0 32 ............................. CTAAACCTGCTTTAAAATCATTAGCCACAGCC 65265 29 100.0 32 ............................. CCACCATCGCCGATAAAAATAACATCATGTTT 65204 29 100.0 32 ............................. TCAAAAGCGCCGCTAACTAGTCTTGGGCAATT 65143 29 100.0 32 ............................. CCTGGTCATATCATCATAACCACCGTTACCAT 65082 29 100.0 32 ............................. ATGACGAGCTAATCGACGGGCTGGTAATTAAT 65021 29 100.0 32 ............................. CACGAAAATCATTTATGACAATGACGGCTCAT 64960 29 100.0 32 ............................. GTGAAATGTCTCGCAGCATGGGCGATATCATG 64899 29 100.0 32 ............................. TTTACAAACTTTCCGTCAACATATGCATCGAC 64838 29 100.0 32 ............................. CGGCTGGCTCTGTGAGATTGATATTTGACAGA 64777 29 100.0 32 ............................. CCCATAGAAATATCGGCAACATCTTCTTTAGT 64716 29 100.0 32 ............................. TAACCTGGCGTTTATTGCGACTTATCTATTAG 64655 29 100.0 33 ............................. CGGGTTGAACTTGGCGGGAGTAAAGCCAATTGC 64593 29 100.0 32 ............................. GACGTTAAGAAGCGTTTAGAGAGGTCTCACGA 64532 29 100.0 32 ............................. CAGACAGAATCATTGACGCGTTCGAAGATGAT 64471 29 100.0 32 ............................. GTGTGTCATAACAATATCCAACTCCTTACGTT 64410 29 100.0 32 ............................. GCTATGAGGTAGTTATGAGCGATATAGATTGG 64349 29 100.0 32 ............................. CCTGGCGAGTTTCGCGATGACATAGTGCAAAT 64288 29 100.0 32 ............................. CTTGAAGCGGATAAATTCAGCGCTAGGGCATA 64227 29 100.0 32 ............................. CCACTCTACAGCCTTTGTTTTAGTATTATGAC 64166 29 96.6 32 ............................C AGATCAAGCAGCTCGAACTCAACAAAATCAAT 64105 29 100.0 33 ............................. CGGTCTAAATCTGACCTAAATCTGACCCGAACA 64043 29 100.0 32 ............................. ATTACTCAGGTGAGGATCGTGCCGAATTGAAA 63982 29 100.0 32 ............................. TAATGTATTAAACGCTTGTAATATTGTCGCGC 63921 29 93.1 0 .........................G.T. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.7 32 GTGTTCCCCGTACTCACGGGGCTGAACCG # Left flank : TTAAGTGCAGGCGAGATTTCACCACCAATTGCCTATGAGGACTCCCAGCCACCAGCAATACCTGAACCGATCTCGATAGGTGATAGTGGCCATCGTTCAAAATAAGGATTTTCAATGAGTATGTGTATTGTTGTTACAGAAGCCGTACCTGCAAGATTAAGGGGCCGTTTAGCAGTATGGCTATTAGAAATAAGGGCAGGCGTATATGTCGGTGATGTAGGGCGCCGCATCAGAGAAATGATTTGGTATCAAGTAACGGAATTAGCTGAGCAAGGAAATGCAGTTATGGCATGGGGAACAAATACAGAATCAGGATTTGATTTTGTTACATATGGTCAAAATGCACGAATGCCGATTGATTTTGAAGGGCTTCGGCTGGTTAAATTTACTCCGATGAATAATGCAACGCCTATTTGTGAATAATCTTTTTTGTTCTTTTAAAATTTGGTAGATTTAACAACGCTATTTTTATTTATTAAAAACAAGCATATACTTTTAGA # Right flank : TTTACTTCAATGAGGGGAGCCCATTAAGCATCTCTTGGTAAGCCTTTTTGTACTGAGCGGATGACGCGTTGGGTTTTGCGTGAAAGCGCCTCCTGTGGCGCTTTTTTCTTTTGTTGTGCTAAGGCCCAGTCGATATGTTCTAGCACCATGTCATCGACTTCGTCGCTGAGTTTACGTTGCTCAAGTGCGGCGATGATATCGGGATTTGCAGGGGCATTGCCAAGTGCAATGGCGATATTGCGTAACCAGCGTTTATGGCCGATACGTCTAATGGCGCTGCCTTCGGTTTGGCGTAAAAAATAGGGTTCTGACCAACTAAATAAATCGATTAACTCGGGTTGAATTAGTGTTTGGCGAGTATGAAAGTCAGACTCTGCCGTCAATGGGGCTTTGCTGTTAACAGGGCACACTAATTGACAGTCGTCGCAGCCGTAAATTCGATTACCGATTAACGCTCTAAACTCTTCGGGTATCACGCCTTGTAACTCAATGGTTAAGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACTCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACGCACGGGGCTAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //