Array 1 27801-28123 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHGM010000018.1 Klebsiella variicola isolate SB5439, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     27801	    29	 100.0	    32	.............................	GGATTCAGTTCGCTAAAGATGGCGACCCGTTC	
     27862	    29	 100.0	    32	.............................	ATATGGTAGAGCCAGAAAACGCCGCATCGGAA	
     27923	    29	 100.0	    32	.............................	AGGGCGGCGAAGAATCATTTCGCGGCTTTATG	
     27984	    29	  93.1	    32	....T.T......................	ACGAAACGCTGGCCAGCCGCTTTTCTGTTATT	
     28045	    29	  93.1	    21	....T.T......................	AAGGTGATCGCCCTTCTCCAC           	Deletion [28095]
     28095	    29	  93.1	     0	....T......A.................	|                               	
==========	======	======	======	=============================	================================	==================
         6	    29	  96.6	    30	GTGTGCCCCACGCGAGCGGGGATAATCCG	                                	       

# Left flank :   GTCTAACGTTCTGCTATGAGAGGAGAACAAAAACCCGCCGCGATTGTATCGCCACCTGGGCTGCAGGCGCAACCCAGAATAACGAGGGGCGCTAACATCGAGTACATCGCGCAGCCGAAGCCGGTAAGACGCGCTAATTAACTTCGTTTAATGAGTATTAAACACTTTTGCAACTCAAAATAAATTCAATAAATTCATACTGTTAAATAAATATCGCTTTATTAAATTGATCTATCTCAACTGTTAAACACATTTGTCTTTACCGGGATTTTCGGACCGATATTATGGCCTGGCTGAAGCGGTTCACCGCCAAAGCGTAGGGCGAGGATCGCCCGAACTTACGCCCCTGGAGATTTTGTAGTTTGAATCGTTGAATGGGGAAATACCCGCTCCCGTGGGGGACACGAAACCCCCGGAGTACGCTCTTTAAAAACGTGTGGGAACCCGGTAGATTTTTAAAGGTGGAATTTTACCTTTAAAAACAATCGTATACTTTTAGG
# Right flank :  GCCAGGGAGCAAGCCGCTCATGCAGGGATAACCCGTTATTACGGAAATGGTTAAAAAATCGATAAAATGGGAAGAGGCACGCAAAATCCTCCTTTCTGATCCTGAAGTTCGCCGTGCTTATGAAGCGGAGAAGCGGGAAGAAGTAACCCCGCGAGGTGTTCCCCACGAGAGCGGGGATAATTCGCCAAATGTGTAAACGTTTTAAATTATAAAATCCTCCCGCGATGCGGGGGTATTTTCTTTATCAATCCCACAATTAATTATTACTGAAATCTATTTCTATCTGCGTACTCAATACGCGGATCGGTTTCGTGTGGGCCGAATTTAACCAGTGAGACAAAAACAATGCTTAAAGCCGTTAAAATGCGCCTTTATCCGAATAAAGAACAAGCTCAATATTTCGCGGTTACGTTCGGCTGCGTCCGGTGGGTATATAATGAGGCGTTGGCGTACTGTAACGCCCATTATGAAGCGAACAAAGATCTACCCGAGGACCAACG

# Questionable array : NO	 Score: 5.91
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTGCCCCACGCGAGCGGGGATAATCCG
# Alternate repeat :   GTGTTCTCCACGCGAGCGGGGATAATCCG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCACGCGAGCGGGGATAAACCG with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.00,-10.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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