Array 1 147426-146953 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAGVA010000009.1 Nocardia cyriacigeorgica strain CNM20110629 20110629S_9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                                    	Insertion/Deletion
==========	======	======	======	============================	===================================================	==================
    147425	    28	 100.0	    33	............................	CAAGCCCGCCGAAACACCCTCCCTCCCAGGCAA                  	
    147364	    28	 100.0	    33	............................	CTCGCCGACATGCGGGCCGGCCGCATGAGCAAC                  	
    147303	    28	 100.0	    33	............................	CGCTACCCGGCCCGACCATGGTTCACGCCGCGA                  	
    147242	    28	 100.0	    33	............................	CAGCGGCGACGCCGCAAGGCTGAGGCGGCCGAG                  	
    147181	    28	 100.0	    33	............................	CATCGCGCCGACCGGCGGGCCCGCGAACGTGTG                  	
    147120	    28	  96.4	    33	.T..........................	CAAGACGATCATCTACTCGGCCGAATGCGGCCG                  	
    147059	    28	  78.6	    51	.T........T.AA.A....A.......	TCCTTGGTGACGGCGTAGTTGACTTCGCCCTCGGCGCATCTCGCACACGAT	
    146980	    27	  82.1	     0	...-..T...............C...GA	|                                                  	G [146957]
==========	======	======	======	============================	===================================================	==================
         8	    28	  94.6	    36	GCGCTCCCCGCACGCGCGGGGATGAGCC	                                                   	       

# Left flank :   AGGCTTTCGCACCGTCATCGACTGCCTCGCCGCCAGCGCCCCCGATGCCGACCTGGTCGCTGCTGTCGACGCCCGCGGCTTCCTGCTCGGCGCTGGCGTGGCCGCCACCCTCGGTACCGGTGTGCTCGCCGTACGCAAGGCGGGCAAACTGCCGCCGCCGGTCGTCACCCGCGAATACGACCTCGAATACGGTAAGGCGGCTCTGGAGATCCCCGCCGACGGCGTCGATCTGGCCGGCCGCAAGATTCTGCTCCTCGACGACGTCCTCGCCACCGGCGGCACCCTCGCTGCCGCGGCCGACCTGTTCACCCAGGCCGGAGCCGAGATCGTCGCGGCTGCGGTCGTTCTTGAACTGGAATCGCTCGGTGGGCGCAAGCGTCAGGGTGATTACCCGCTGACGTCGATCGTCACCGTCTGAGCGCACTCCGCAGCAGGCCACGGAGGTGACCAAAGTGAACGAAATTTCGGCTACCGGTGGGTAGAGTGCCTGGTCAGGAAGT
# Right flank :  TCGGCTTACCGTTGCCTGCTGCGTCGGGTAGAAGTCCACGATGGGGTGGTGTCTATCGGTACGAAAGTGCCAGAAAATGGCCTTGGCAACCTGTTGCCGGACAGTGTGCTGGCGCGGGGGCTAGAGTTGATGGTCTGGGAGGTTGCGGTGGTCGGATGAGGTCCCGGCCACAGCGTGGAGAGGTGGTGGCATGACTCAGCATCTGGGCGAGGCGAACGTCGAGCAATCGGCTGCCTCGCGGCCGGGCGGTGCGCCGGCCACCTCGTCCGATGGTGCAGCGGCACAACCCGCACGGCCAGCGACCCCAGGTCCCAATCCTGACGTGGTGCGCCAAGGGGGCACGGCGGCGGTGCCGACCTCGGCCTCGCGGCGGGTGCGGGCCCGCCTGGCCCGGCGGATGACCGGCCAGCGGGGCATCGCGGCGGTCAAGCCGGTGCTCGAGCCGCTGGCGACAGTGCACCGCGAGCTCTATCCCAAGGCGAACCTGACGCTGTTGCAGC

# Questionable array : NO	 Score: 5.94
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGCTCCCCGCACGCGCGGGGATGAGCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [15-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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