Array 1 234758-236246 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUBU01000001.1 Lactobacillus gasseri strain BC12 scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 234758 36 100.0 31 .................................... TTCAGGTTTCCAATATGCAGACCAACACATT 234825 36 100.0 30 .................................... TCAATTTAAGGCAAACCCGCCAGGAATTGT 234891 36 100.0 30 .................................... CTAGAAGGAGAAAAAATATAATGGCTTACA 234957 36 100.0 30 .................................... GTGTTATGCAAGTAATCAGTTTTATGGCTA 235023 36 100.0 30 .................................... AAGCGCAGAAGCTCAATACGTTCGACCCGT 235089 36 100.0 30 .................................... AAATGCGTTTGAGGAAGAGCAAAACCGCCA 235155 36 100.0 30 .................................... CCTATTCTTAATAAAACATCAGCGTTCGTC 235221 36 100.0 30 .................................... TTGGAATGATTATTATGAGGCTGTTTTGAG 235287 36 100.0 30 .................................... CCGAAAGGAGGGAAAACATGCCAAGTCTTA 235353 36 100.0 30 .................................... TTCTAATTGCAAGAATATTAGCTGTCTTCT 235419 36 100.0 30 .................................... AAGAGATCAGACTATATAACCGAAAGGGTA 235485 36 100.0 30 .................................... GCTGTTCGGACAAAAAAGATCAGCTTCCTT 235551 36 100.0 30 .................................... ACACTAATGAAAATTATTACATTTTCAGCT 235617 36 100.0 30 .................................... TCGAATTAAGACGGAAATACACGAATAGAG 235683 36 100.0 30 .................................... GTTAGATTGATAACTACACCCAGATGATCT 235749 36 100.0 30 .................................... TGTCCTGTTTCACTGGTTATCCCAGTTATA 235815 36 100.0 30 .................................... TTTTAAATCTGTATCTAACTTTTCCGGATT 235881 36 100.0 30 .................................... TACCATATAATCCTATAATCCACAGTGTTA 235947 36 100.0 30 .................................... TTCTTTTTCTTCTTGTACAGCCTTTTCATT 236013 36 100.0 30 .................................... GGAATAGCTTAAACCGTAATCACGGTTTCA 236079 36 100.0 30 .................................... ACAAACAGCCAACGAGCCTACAATTGAAAA 236145 36 94.4 30 ..........................A.....A... TTCGAAAAGTAGCTAGGCTGGCGGTGCCAA 236211 35 83.3 0 ........A...C.........T...A.....-..T | A [236227] ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.0 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : AATCAAAATATTTTTGATAAGTATATGCCTGTAATTATAAAAGAATACATTGAAGGGCTTAATGAAGCGGATCGTAATGAAATATTAAAAACCTACCATAAATTAGAGGGGATAATTCAAGATTCACTTCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAGTTCTTAAAGATAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAGCCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAACTATAATCTTCATTCCATACCTGTTGCCTGTAATGTAGCTCATTACTTAAATGTAGCTCAGGTAAAAATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGGTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTAATTAAAAACTGATTATAAAATTTCG # Right flank : TTGTAGTGAGTTACGATAATTAGTCGTAATTACACTACTGGTCCATTGCTTTCGCAATGGACTTTTTTAATATATTCCAAACCATTTTTCACCCCTCCGGTGCAAAAGTTTGTTTTAAATGTAAGCGCTTGTTTAATACTATATAAGTGTCAAGAGAAATAAAAGAAAGTATTAATGGAGGATTTAAAAATGACTAAGAATGTTTTATTAGTATGTGGTTCAGGTGCATCATCAGGTTTTATGGCTGCTAACATGAGAAAAGCATCAAAGAAAGCTGGTTTAGATTATAAAATTCAAGCTCGGAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGATGCCTTAATGGTGGGTCCTCACTTAAAGGCAGAGTTGGATGCAATTAAATCACAAGTACCTGACAAGGTAAAAGTAATTCTAATGAAGCCAGATTACTATTTAATATTAGATGGCAAAGCAGCCGTTGAAGACTTACAATCACATTTTACTGAATAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //