Array 1 22309-23587 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMKA01000078.1 Chryseobacterium sp. Leaf201 contig_39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 22309 47 78.7 30 TACCCT.CCG.A................................... CGCCCTGACGGGAATGTTGTGTTTTAGGTA 22386 47 100.0 30 ............................................... CTATAATTGCAGATATTGTTTGCTGCTATG 22463 47 100.0 30 ............................................... TAATGCTACTTCATGGATTAAGTCTGTGAC 22540 47 100.0 30 ............................................... ATAAGGGGGCTAGGCAACAAGCCTGCCAGT 22617 47 100.0 30 ............................................... TAGTCTTTCCACCGCGTGTTCGCGTGTATT 22694 47 100.0 30 ............................................... ACAGGCTTTCCCGTTGGTACATCCTGAATA 22771 47 100.0 30 ............................................... TTCCGGCAGCCGGGGTAACACTTACGGAGA 22848 47 100.0 30 ............................................... TAGTAGTTCAATTGGTGCTGTGACAGCAGC 22925 47 100.0 30 ............................................... GAAATTTTATGTGGAAAATACGTTGACTTC 23002 47 100.0 30 ............................................... AATCGCTTTGAAGTGGTCAGTGTGGTCTTC 23079 47 100.0 30 ............................................... AACTGTTTCCGGGGATGTGCGGTCTGATAC 23156 47 100.0 30 ............................................... TAGCGAAGTTGCCAATTATATAACATCTAA 23233 47 100.0 30 ............................................... CGATCATTTTGGAGGAGCTGTTGAGAGCAT 23310 47 100.0 30 ............................................... TATAATGCTACTTTTACATGTACGAACATA 23387 47 100.0 30 ............................................... GAATTGGCTGTATCGTGGTACGAACCCCCA 23464 47 100.0 30 ............................................... GAGATATAACAAAGTAATAAGTTTGCTTAA 23541 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 17 47 98.7 30 GTTGTGAATTGCTTTCAAAATTTACTATCTTCGTGATTAGTCACAGC # Left flank : GATCGTTATTAAAGCTCCGACTGCCCTGCCCTGCTTATAAGTCCATATAATAAAGTTGGTTACATAAATAAATTAGCTTCCCGGGGTTGTGAGTTATAAAAATATTTGTAATATTGTAACAACCAAATATTCAATCATATGAAAACAAATCTTAAAGGTCTAAGATCATTAGACAAAAAGCAGTTAAAAAATATTTTAGGAGGATACCCGATGTGTCCGGAAGATTTACAATGTGGAAATGACTGGTGCTGTATCAACGGAGCATGCCGGCCTATTTCACAGGCGGGACCGGGCCATCTCTGCATGGCAATCGTAGATCCCATAAGCTAAAACCGGATATCCATACATTTCAAATTACTTCCCCGGCGATATTGTCGGGGATTTATTTTTAAGCAGTTATAAATTATGGTATTTAATCACTTTAACTGTGCTAAAATTTTCATTTCACGTTCTACCGACTGTTGTGAATGGCTTTGGCTACGCCGAATCCTCCAACCCTA # Right flank : CCTCAAAAAATAAACTACTGAAATTCAGTAGTTTATTTTTATTTTCAGAATTTAAAATTCAGAATAATTCGAGCTGCTGGAAGGTTGGCGGCGGTTCTTCTTTATTCCTGGCAAAGAAGATTTCAATATCCCCGAACTGCTTATCCGTAATGCACATAATGGCTACCTTCCCTGCTTTGGGCAGCATAAACTTAACGCGTTTAATGTGGACCTCGGCATTTTCACGGCTCGGGCAGTGACGAACATACATTGAAAACTGGAATAAGGTGAATCCGTCATCAATCAGGGCCTTACGGAAACGGCTGGCATCTTTCATATTGGCCTTGGTTTCAGTCGGGAGATCATACAATACTAATACCCACATAATTCGGTATGCATTAAACCTTTCGGCGTTCATAATAATTCAGGATAAGAAATCAGGCGCTTTTCGCCTGTATAACATTTGTACAGCGAACTGGCGGTCATCTTTACGGCCACCATCAGCGGCCTTGTTTTACTGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTTACTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //