Array 1 164977-160613 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLOC01000003.1 Marinomonas aquimarina strain CECT 5080, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 164976 29 100.0 33 ............................. CGTGGGGACGTATAAAGTCAAATGAAATCAGGC 164914 29 100.0 32 ............................. TTTATTGCCGCCGCTTACACTAACGTCTGATA 164853 29 100.0 32 ............................. AATGCCGAGGGTTCGGTCGTTGCGATCGTAGA 164792 29 100.0 32 ............................. TGACCGATTCGCGCTTTGTAGAAATTGACGAC 164731 29 100.0 33 ............................. CGACGATAAAATCTTTGACCTTGCTTTTCAAGC 164669 29 100.0 32 ............................. TTAAACTCTCGATTAGCATCGATCTCTTCTTC 164608 29 100.0 32 ............................. TAGACCTCTTCTTCACATACGCCGCCAAGCTC 164547 29 100.0 32 ............................. ACTGAAACCGCGTGATCTGATAAACGTACTGA 164486 29 100.0 32 ............................. CCAGCATTTTGGTTGCTGCCAGCAGATATTGA 164425 29 100.0 32 ............................. TCAAACGAGTTCGCGCCGTCGTTCACCGCTTG 164364 29 100.0 32 ............................. GCAATGATCAAGAAGACCAAAGCAATGATGCA 164303 29 100.0 32 ............................. CGATCTCTGCTATGTGAGGCGGCGCCAGTTGC 164242 29 100.0 32 ............................. TATCTCGAAAGTCTGACTTACACGGACAATGC 164181 29 100.0 32 ............................. TAACATGGCATTAAACGAAGTAAAGTTAATTG 164120 29 100.0 32 ............................. ACCACCATCTTAAAAGGTATGAAAGACCAGTC 164059 29 100.0 32 ............................. GGGTGATTGTGCTGAAGGTGGTTGATGATGTT 163998 29 100.0 32 ............................. GTTCTGATGCATCAGCGCCTGGGTGATGCTCC 163937 29 100.0 32 ............................. TCAGTGTCGTCTACTGCCAGCGCTCTAACGCT 163876 29 100.0 32 ............................. CGCCGCTGCTTCCATCAAGTTCTTGTGATCAG 163815 29 100.0 32 ............................. TTTCCCCGACTACGGGGTTTCTGAGTTAGTAA 163754 29 100.0 32 ............................. TCTTTCTTAGAAAAGCAGCTCACAATGGATGA 163693 29 100.0 32 ............................. CCACCTATCGATGATCCGCATTCTTACCTTAT 163632 29 100.0 32 ............................. AGTGCAGGGCTAAGATGCGTAGTGTAATTATT 163571 29 100.0 32 ............................. AAAGAAACTGGCGGCACGGTATTTAATGAGCA 163510 29 100.0 32 ............................. AATATTTAGATACCTACATGGATTTAGATGAG 163449 29 100.0 32 ............................. CTACACCCAAACCGCCACGATTGGTTTTATTG 163388 29 100.0 32 ............................. ATGGTATTCAGGAAGCGCACCCGAAAGAATTG 163327 29 100.0 32 ............................. CTGGAATCGGCGGCGGAGCTGGCTCAAACACT 163266 29 100.0 32 ............................. TGCCACAACTACGGGAGGCGCTGGCGGAACAG 163205 29 100.0 32 ............................. TATGGCAGTGGCCTTACAGAAAGCTTCTGCTG 163144 29 100.0 32 ............................. TTTTGGAGGCTAAATAATGAAATACATTCGTA 163083 29 100.0 32 ............................. GCTGGGCATGGCTTAAGAAACTATTTGAAAAC 163022 29 100.0 32 ............................. ATCCGCACCGCCGCCGTAACCCATACCGCCTC 162961 29 100.0 32 ............................. TTAGCCGAGGCGCTTGACCACGCAGCAATCAG 162900 29 100.0 32 ............................. CGCCGCGTTGTCGCTGACTCGATCCGAGTTCA 162839 29 100.0 32 ............................. GTTTTAACCCATTTTATGTGGCGAAAGGGCCA 162778 29 96.6 32 .T........................... CGTTTTCCATTCTTATAGATGACTCACTAAAA 162717 29 100.0 32 ............................. CGATAAAAACATTTTTGACATTTTCATTGAAA 162656 29 100.0 32 ............................. CGGAGGTGGTGGAGATATTTGGTAATGAGCAA 162595 29 100.0 32 ............................. TGTTGCATTGATTTTGGAGTTACTGCGCCTGA 162534 29 100.0 32 ............................. CAAATTGAGCACGTTATAGAGACTCACCGTTT 162473 29 100.0 32 ............................. GAAACGTGCTCGCATTGCGTAGTACCCCTCCA 162412 29 100.0 32 ............................. ATGTAAAGGTGTTGTCGCCTAGTCCGTTGGTC 162351 29 100.0 32 ............................. ACTTATGCTGAAATCGAAGCAGCTACGGGGAT 162290 29 100.0 32 ............................. GCAACGGGGAAAATCACCGGCGATGCCACCAC 162229 29 100.0 32 ............................. TTCCTTACTTGGAGCTTGTTCAACTAGCAGGG 162168 29 100.0 32 ............................. CGAAACCGTTACAGCCCCATTGCAGCGCGCAC 162107 29 100.0 32 ............................. CGCAACTCACCAATACGCCCACCCCACATAAT 162046 29 100.0 32 ............................. CCACCCATGCCGAGTTTGTAAACAGTCTCGTT 161985 29 100.0 32 ............................. CGACGAGTTTGGCGATGGGTTGGTCTGAACAA 161924 29 100.0 32 ............................. TGTTTATGACCGCCGCCGTTAAGCGCGAATAC 161863 29 100.0 32 ............................. GTTCAGCTTCTGGGCTTCTTCAATTGAAAGAA 161802 29 100.0 32 ............................. GAAACTCGCGACCCCTGCTGTATCGTCGCCAA 161741 29 100.0 32 ............................. TCTTTACCTGACCTAGCCTTAAACGCATTGTA 161680 29 100.0 32 ............................. CGCTAGAGGAACAAATAGATGCGGCGGAAGAG 161619 29 100.0 32 ............................. ACGGTTGCCGCCCTGATCGGTGCTGACTACCA 161558 29 100.0 32 ............................. GCATCATCGAAAGCAACGACAACCTAAAGCAC 161497 29 100.0 32 ............................. GTGGCATGCTCATCAATAGGCGGTATGAGTAC 161436 29 100.0 32 ............................. TCCAACTAGATCATTTGGCGGTAGATCATAGT 161375 29 100.0 32 ............................. ACATACAATTTATCTCGACCTGGCGGGGTCGG 161314 29 100.0 32 ............................. CGAATGAATAAACTTATAAGCTGCTCAGTCGT 161253 29 100.0 32 ............................. GATGTTGTGTTTATTGGTGGCGAAAACTTTAT 161192 29 100.0 32 ............................. ATTCGTTCTTTTGACGGCAATAACGGAACCGT 161131 29 100.0 32 ............................. CACATCGCGGCGCAGAGCGCTTTCTACTTTCA 161070 29 100.0 33 ............................. GATACCAAAGCACCTAAACGCCTACTAATTGCT 161008 29 100.0 32 ............................. GCACTAGAAGACGTTAGAAAGGAAATCTCCAT 160947 29 100.0 32 ............................. AGTTGGCCACGGAAATGGAGCACGTTGGTTTA 160886 29 100.0 32 ............................. TACACAACTGAGTACATGGATTTTCTGTACTC 160825 29 100.0 33 ............................. GATGGTATGTGGTATCTGCCGCTAGTGAAGGGA 160763 29 100.0 32 ............................. CCATGGATGGCGCGTACTTGTTTAAGCTTGAC 160702 29 100.0 32 ............................. ATCCAAATGAACAAAGGAGTCCCTCAGATTGA 160641 28 75.9 0 .......T.AC.-...GA..........A | A [160619] ========== ====== ====== ====== ============================= ================================= ================== 72 29 99.6 32 GCGTTCCCCGAGCACTCGGGGATTAACCG # Left flank : CGATAGCGGCCATCGCAGCCATTAGAGGAGATTTGCAATGAGTATGTTGGTAGTAGTAACAGAAAGTGTGCCAGATAGATTAAGAGGGCGTTTAGCTATTTGGTTACTCGAGATTCGAGCGGGCGTTTATATTGGTGATACGTCACGCAAAATACGTGAAATGATCTGGGAGCAAGTCAACGCCTTAGCCGAACAAGGGAATGTTGTGATGGCTTGGTCGACCAATTCAGAATCGGGTTTTGAATTCCAAACTTATGGTGAAAACCGCCGTATACCGGTGGATTTAGATGGACTTCGACTGGTGTCATTTTTACCTCAAAAATAGCTAACTTAATGATTTTTATGGACTTTCGGTGGAATTTGTTTGTTTGAAGCTCCTTTCGGTTAAGTTCTTTAAAATCAAAAGGTTATAGATCTTTAAAAACTTAAAAAGAACACTAAATCTTGGTGGATTTCTTTGTAAGGCATTTTCCTCTATAAAACAATAATCTACACTAAGA # Right flank : AGACCGTTGTCGGGTTCAGTCATCACACCTAGGTGTTCCCCACGACAGTGTGGGGCTATAGTATCTGCAGAACTAGGCCTATATATTCAGCTTAATATCAATTATTTCTTATCGCTGCTAACATCCGACCCTTGTTTGAATGGATTTAGCGTGACTTATGATTCGATTACACTGCACTAATAAACTGCTCCCGAAGCTGCCGACCAACGCTAATGGGCGTTTGCCGAGTTCGGCGTCACAGGTCATCCCTGGGCTAGAAGCGTTGAACCCCCTAAGTGGCTGGCACGGCAGTTTGTTTTTGGTTAAGGGGCGCAACTGTGTGATTTGCGTCCACGAAGCAACACGCCTAGCCATTTACATCCCCTGTCTGAATAAAGCCGATTTCGCTGATTTGGACCGCTTGTTTGCTCAGGCGCTACTGCAATCCCTAGAGGCCATCCAAGCCACTGAAGAGCAGATCAATACTGCTAAGCAGCTGCTTCAGCCGTTAGTGATTGATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGAGCACTCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.10,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //