Array 1 779295-783595 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042997.1 Aquisphaera giovannonii strain OJF2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 779295 32 100.0 36 ................................ AGCTTCATGTCGACGATGCGGGCCCGGGCCTCCTCG 779363 32 100.0 37 ................................ ATGATGGTCACTCGGGTCATGTCCTCCGGGACGCAAA 779432 32 100.0 34 ................................ TTCGTGCCGTCAGTGGCCACCCGGGTAACCTCGA 779498 32 100.0 36 ................................ ACCTCCAGCTCGAGATGCCGGCCGCGCCATGGCCCG 779566 32 100.0 35 ................................ TCGGCGGCCCTCCGCAGCCCGACCGTCCCCTCCCC 779633 32 100.0 36 ................................ GTGATCTCGGGGTACGTCCGCCGGAAGATCACCGCG 779701 32 100.0 36 ................................ ATCTCCCGGTAGTGCCTGATGCGCTCCCCCTCCTTC 779769 32 100.0 36 ................................ ATGATCGAGACTTGGCGGAGGGAAGCCGCCTCCGTC 779837 32 100.0 34 ................................ GCCGCGCCGGCGTCCGGGTCCGCCTCGCTGGTCG 779903 32 100.0 34 ................................ GGCGTGGACCAGTTCGCCGTCTTCGCCACGACGG 779969 32 100.0 34 ................................ TTGCGGGCGATCTTGAACGAGTACCAGCCCGAGG 780035 32 100.0 34 ................................ CAAATCCAGTGGGCCCGCGACGCGATCCGCCAGT 780101 32 100.0 35 ................................ CCCGCGGGCGCGGCGCGATCCAGGCCGTCGGGGAT 780168 32 100.0 36 ................................ GGAGGCCATGACTGTCCCCAGGATGCCGGTAGATGC 780236 32 100.0 35 ................................ TCGTTTCCGTCGCCGGGTCGATCATCTCCGCGACA 780303 32 100.0 36 ................................ ACGGCCTCGCTCGCCGACGTGTTCGAGGATTGGGAC 780371 32 100.0 34 ................................ GAGTTCTCGGGGGCGGGCCGCGATCAGCCCCTCC 780437 32 100.0 35 ................................ TCCTCGAGGATGGGGCGGAGGCCGTTGATCGTCGC 780504 32 100.0 34 ................................ GCGAGCCTGGAGATGATCTACGGGGTGGGCTACT 780570 32 100.0 36 ................................ AACGCGGTCGGGACCACGAACACGGCCCGCGTCACG 780638 32 100.0 34 ................................ ATCTCGCGGATCGCCCTGGCGGGCTCGCCGCCGT 780704 32 100.0 34 ................................ GTCGATATCCAGGCGGATAAGTCGCCGATGGATA 780770 32 96.9 35 ..A............................. CTCCGGAGAAGGACCTGGTTGTCATAGATGCTCGC 780837 32 100.0 36 ................................ ATCCCATCGGGCGTCGTCCTCTGCGTCGCCCCCACA 780905 32 100.0 34 ................................ TGCTGCATGGTCTGTCATCGATCCGGCATGGACC 780971 32 100.0 35 ................................ CTTCACGTCGTCGACGATCGCCTCGAAGGCGCGGA 781038 32 100.0 34 ................................ GCGGCCAGATCGCGAAGGTGATCGGCCAGGGCTT 781104 32 100.0 33 ................................ GTCCCGAATCCCGAGACGTTCTCGGTGAACTGG 781169 32 100.0 36 ................................ TGGTGGCGAATCAGTTCGTCCCCGTGAACCCCACGC 781237 32 100.0 36 ................................ GGCTGCGGTCTGGAATACCCGGCCGGGACGCGCATG 781305 32 100.0 34 ................................ CAGGCCGCGAACGCCATCGGCGCCACCCGCCTGG 781371 32 100.0 36 ................................ TTGAGCCCGGCGTCCCCGATCTGCGGCGTGGCCCCG 781439 32 100.0 33 ................................ CGCTTGTGGCACCCGGTACAGAGCGTCTGGTAG 781504 32 100.0 34 ................................ GGCGCCGGGGCCGGTCTTACGCCACCACCGCCCT 781570 32 100.0 33 ................................ CGACATCGATCCCAAGGACGACGACGCCCCCGA 781635 32 100.0 35 ................................ TGAGCGGGAGGTCCTCCGGCACCACATCGGCAACG 781702 32 100.0 35 ................................ CTCCTCGGGATCGGGCCTCGGCTCGCCCGCGAGCG 781769 32 100.0 34 ................................ CCAGCCCGCGTATGCTTACCGTTACAACAGCCCG 781835 32 100.0 34 ................................ CTGGGCTCATTCCTCCCCAGCCTGGGCACCGGGA 781901 32 100.0 34 ................................ CTGGCCCCGGGCTCGGGCGCCGTCACGCTCTCGG 781967 32 100.0 35 ................................ GTCACCGGGGCGGAGATCACCGACCTGGTGCTGAC 782034 32 100.0 34 ................................ TCCGCCCCCGGGCCCGCATGTGCCGTCCGGCTTC 782100 32 100.0 35 ................................ GGGATCGGCCAGGTCGCTCGGCTTGAGCGGCACGG 782167 32 100.0 34 ................................ TCGCCCCACGGCATCGTGGCGTCCTTGGGCGAGA 782233 32 100.0 35 ................................ AGCGGCGCGGGGAGGTAGTCGGAGAAGTCCTGCCG 782300 32 100.0 34 ................................ CCGGTCAGGGCGAACGAGCCCGCCGAGGCGGTCA 782366 32 100.0 34 ................................ CGCAGCACCCAGCACCACGGGCCCTCCGCGAAGG 782432 32 100.0 37 ................................ CGCACGTGTCGATGACGACGCACCGCGACGCGACCAG 782501 32 100.0 33 ................................ ACAACCCGTTCGCCCAGGCCCTCCCGAATCAGC 782566 32 100.0 35 ................................ CCGCGCGGCGATCTCCGAAGGCCGCAGGCCGCCCC 782633 32 96.9 33 ...........T.................... CGGGTCATGTCCCGGAGCTGCTGGCGGGCCTCC 782698 32 96.9 36 ...........T.................... GCGAAGTCCCCCACCAGCATTCGGGCGGAAGCCTCG 782766 32 96.9 34 ...........T.................... GATGAGGGGCGGATGGTTCGACGGGGGAAGGACA 782832 32 93.8 34 .......A...T.................... TATTTCACGACGACCACGGCGGGGCGGGTCCGGA 782898 32 96.9 35 ...........T.................... CGCGATCGTGGCGACCCTCCTCGGGCACAAGGATA 782965 32 96.9 34 ...........T.................... GCGGACACTCAGGCGGAACCGAAGTCCGTCTATC 783031 32 96.9 35 ...........T.................... TCGATCATCCCGCCGAACGCACCTCCGACCGCAAG 783098 32 96.9 33 ...........T.................... AAGCCGGCCGAGTCCAACCCGCACCACAATCCC 783163 32 96.9 36 ...........T.................... CTACGCGGCCTTAGCTGAACGTCGGGTCCACGAGGG 783231 32 96.9 34 ...........T.................... GTCTCGATCCTCGCCCGCTCCCTCGCCCCGGCCG 783297 32 96.9 34 ...........T.................... CCACTGCTCCGCGAGGGCGAGAGTCGCCTGGAGA 783363 32 96.9 35 ...........T.................... CTGTCGACCCCCAGCCCCTCCTGCAGGTTGAGGAA 783430 32 100.0 34 ................................ GTCGATATCCAGGCGGATAAGTCGCCGATGGATA 783496 32 96.9 36 ..A............................. GGCGTGCTGCTCTCCGAGGGTGCCGTGAAGGCCAAG 783564 32 93.8 0 ......T..A...................... | ========== ====== ====== ====== ================================ ===================================== ================== 65 32 99.2 35 GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Left flank : CGATCCGTCCCGCACCGAGGCCCCCGCCCCTCATGTATGTCCTGGTCACCTACGACATCCAGACGACGACCGCGGCCGGCCGGCGTCGCCTCCGCCAGGCCGCGAGGGCCTGCCTCGACTTCGGCCAGCGCGTGCAGCTCTCCGTCTTCGAGCTGAAGGTGGATCCGGCCCGATGGGCCCAGTGCCGGGCCCGGCTCCTGGGGATCATCGACCCCGCGGTGGACAGCGTGCGGTTCTACCACCTCGGCTCGAACTGGGAGAGCCGCGTGGAGCATCACGGCGTCCAGACCGGATTCGACATCGAGGGGCCGCTCATCATCTGACGCGGACCGCCGGCGCGCACGAAAATGCCGCCCGGTTCGCGATCGCCGGAACCCTCTTTCTCAATTCGGTTTCGGTTTCCCCCATCGCCGTGCCCCGGCTCCCCACCCCGCCTCGACCAGCCGGTCCGCGGAATGCCGTTCCTAACCCCCACCCCCGCCACCGGTTAGAATGGCGGA # Right flank : CGCCTCAGCAGGTTCCGGAGCCAGACGTCGTCGTAGCGGTACCCGTTGGGCCGCTCCGCCGGGCTCCGCCAGCCGTCGATGTCCCGCGCCGTGGACGGGTACCGCGCCCGAAGTTGAAGTGCGGCGCCCATCGCCGGCAATGCCAATCGCACACCACGGCGGCGCCGTGCCGACACTGGCCGTCGTCGAAGTATCGATTCATGCGCTCATCGCGCGGTTCAGTATGTTGCTTGCCCGATGCCCGTCGGGGTGCGAATACGCCTCGGCCTGCTCGCTCGACCGGCCACACGGCATCTCGACCTACTCCAGCAGCCACGCCGACACCCGCCGCCCCCGGCCTACTCCAATAGCAGCTTCAGCCGCTACGCGAAACCCCGCCGCGACGGCGCTCCGTACGACACCCGGACCTTCGACGACGGCTCGCGGAACGACGCGCTGAGCTTGCCCCGGCTGCGGATATTCAGCCAGCCGTGCAGGGAGCCGCCGAGCAGCGCCACCAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //